BLASTX nr result

ID: Coptis23_contig00020475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020475
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinife...   175   4e-42
gb|AFK47180.1| unknown [Lotus japonicus]                              175   6e-42
ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycin...   173   2e-41
ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycin...   171   8e-41

>ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinifera]
           gi|297735541|emb|CBI18035.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  175 bits (444), Expect = 4e-42
 Identities = 88/138 (63%), Positives = 101/138 (73%)
 Frame = -1

Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403
           QFVFMDLS++EEIRLN+ DVG+R KWLKEGMDC VLFWNGK+IDF+LPIT+KL+VV VDP
Sbjct: 130 QFVFMDLSTFEEIRLNESDVGERTKWLKEGMDCNVLFWNGKIIDFELPITIKLTVVDVDP 189

Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223
           G+KGDTAQGGSKPAT                               +DTGAVVNVPLFVN
Sbjct: 190 GIKGDTAQGGSKPAT-------------------------------LDTGAVVNVPLFVN 218

Query: 222 TGDEILVDSRTGQYMSRA 169
            GD+ILVD+RTG+Y SRA
Sbjct: 219 IGDQILVDTRTGEYRSRA 236


>gb|AFK47180.1| unknown [Lotus japonicus]
          Length = 229

 Score =  175 bits (443), Expect = 6e-42
 Identities = 89/138 (64%), Positives = 99/138 (71%)
 Frame = -1

Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403
           QFVFMDL+SYEE+RL++KD+GDR KWLKEGMDC++L WNGKVID DLPITVKL+VV VDP
Sbjct: 123 QFVFMDLNSYEEVRLDEKDIGDRTKWLKEGMDCSILLWNGKVIDIDLPITVKLTVVDVDP 182

Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223
           GLKGDTAQGGSKP T                               +DTGAVVNVPLFVN
Sbjct: 183 GLKGDTAQGGSKPTT-------------------------------LDTGAVVNVPLFVN 211

Query: 222 TGDEILVDSRTGQYMSRA 169
            GDEILVD+R G YMSRA
Sbjct: 212 VGDEILVDTRNGVYMSRA 229


>ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycine max]
           gi|255629257|gb|ACU14973.1| unknown [Glycine max]
          Length = 233

 Score =  173 bits (439), Expect = 2e-41
 Identities = 88/138 (63%), Positives = 99/138 (71%)
 Frame = -1

Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403
           QFVFMDL++YEE RL +K++GDR KWLKEGMDC +L WNGKVID +LPIT+KL+VV VDP
Sbjct: 127 QFVFMDLNTYEEFRLGEKEIGDRTKWLKEGMDCNLLLWNGKVIDVELPITIKLAVVDVDP 186

Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223
           GLKGDTAQGG+KPAT                               +DTGAVVNVPLFVN
Sbjct: 187 GLKGDTAQGGTKPAT-------------------------------LDTGAVVNVPLFVN 215

Query: 222 TGDEILVDSRTGQYMSRA 169
            GDEILVDSRTGQYMSRA
Sbjct: 216 VGDEILVDSRTGQYMSRA 233


>ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|222867706|gb|EEF04837.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  172 bits (437), Expect = 3e-41
 Identities = 89/138 (64%), Positives = 100/138 (72%)
 Frame = -1

Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403
           QFVFMDLS++EE RLN+ DVGD+ KWLKEGMDC +LFWNGKVIDF+LPITV+L+VV VDP
Sbjct: 79  QFVFMDLSTFEEYRLNEADVGDKTKWLKEGMDCNLLFWNGKVIDFELPITVQLTVVDVDP 138

Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223
           GLKGDTAQGG+KPAT                               +DTGAVVNVPLFVN
Sbjct: 139 GLKGDTAQGGTKPAT-------------------------------LDTGAVVNVPLFVN 167

Query: 222 TGDEILVDSRTGQYMSRA 169
            G EILVD+RTGQYMSRA
Sbjct: 168 IGAEILVDTRTGQYMSRA 185


>ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycine max]
           gi|255627395|gb|ACU14042.1| unknown [Glycine max]
          Length = 237

 Score =  171 bits (433), Expect = 8e-41
 Identities = 87/138 (63%), Positives = 98/138 (71%)
 Frame = -1

Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403
           QFVFMDL++YEE RL +K++GDR KWLKEGMDC +L WNGKVID +LPIT+KL+VV VDP
Sbjct: 131 QFVFMDLNTYEEFRLGEKEIGDRTKWLKEGMDCNLLLWNGKVIDVELPITIKLTVVDVDP 190

Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223
           GLKGDTAQGG+KPAT                               +DT AVVNVPLFVN
Sbjct: 191 GLKGDTAQGGTKPAT-------------------------------LDTNAVVNVPLFVN 219

Query: 222 TGDEILVDSRTGQYMSRA 169
            GDEILVDSRTGQYMSRA
Sbjct: 220 VGDEILVDSRTGQYMSRA 237


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