BLASTX nr result
ID: Coptis23_contig00020475
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00020475 (582 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinife... 175 4e-42 gb|AFK47180.1| unknown [Lotus japonicus] 175 6e-42 ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycin... 173 2e-41 ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|2... 172 3e-41 ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycin... 171 8e-41 >ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinifera] gi|297735541|emb|CBI18035.3| unnamed protein product [Vitis vinifera] Length = 236 Score = 175 bits (444), Expect = 4e-42 Identities = 88/138 (63%), Positives = 101/138 (73%) Frame = -1 Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403 QFVFMDLS++EEIRLN+ DVG+R KWLKEGMDC VLFWNGK+IDF+LPIT+KL+VV VDP Sbjct: 130 QFVFMDLSTFEEIRLNESDVGERTKWLKEGMDCNVLFWNGKIIDFELPITIKLTVVDVDP 189 Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223 G+KGDTAQGGSKPAT +DTGAVVNVPLFVN Sbjct: 190 GIKGDTAQGGSKPAT-------------------------------LDTGAVVNVPLFVN 218 Query: 222 TGDEILVDSRTGQYMSRA 169 GD+ILVD+RTG+Y SRA Sbjct: 219 IGDQILVDTRTGEYRSRA 236 >gb|AFK47180.1| unknown [Lotus japonicus] Length = 229 Score = 175 bits (443), Expect = 6e-42 Identities = 89/138 (64%), Positives = 99/138 (71%) Frame = -1 Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403 QFVFMDL+SYEE+RL++KD+GDR KWLKEGMDC++L WNGKVID DLPITVKL+VV VDP Sbjct: 123 QFVFMDLNSYEEVRLDEKDIGDRTKWLKEGMDCSILLWNGKVIDIDLPITVKLTVVDVDP 182 Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223 GLKGDTAQGGSKP T +DTGAVVNVPLFVN Sbjct: 183 GLKGDTAQGGSKPTT-------------------------------LDTGAVVNVPLFVN 211 Query: 222 TGDEILVDSRTGQYMSRA 169 GDEILVD+R G YMSRA Sbjct: 212 VGDEILVDTRNGVYMSRA 229 >ref|NP_001236933.1| uncharacterized protein LOC100500109 [Glycine max] gi|255629257|gb|ACU14973.1| unknown [Glycine max] Length = 233 Score = 173 bits (439), Expect = 2e-41 Identities = 88/138 (63%), Positives = 99/138 (71%) Frame = -1 Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403 QFVFMDL++YEE RL +K++GDR KWLKEGMDC +L WNGKVID +LPIT+KL+VV VDP Sbjct: 127 QFVFMDLNTYEEFRLGEKEIGDRTKWLKEGMDCNLLLWNGKVIDVELPITIKLAVVDVDP 186 Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223 GLKGDTAQGG+KPAT +DTGAVVNVPLFVN Sbjct: 187 GLKGDTAQGGTKPAT-------------------------------LDTGAVVNVPLFVN 215 Query: 222 TGDEILVDSRTGQYMSRA 169 GDEILVDSRTGQYMSRA Sbjct: 216 VGDEILVDSRTGQYMSRA 233 >ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|222867706|gb|EEF04837.1| predicted protein [Populus trichocarpa] Length = 185 Score = 172 bits (437), Expect = 3e-41 Identities = 89/138 (64%), Positives = 100/138 (72%) Frame = -1 Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403 QFVFMDLS++EE RLN+ DVGD+ KWLKEGMDC +LFWNGKVIDF+LPITV+L+VV VDP Sbjct: 79 QFVFMDLSTFEEYRLNEADVGDKTKWLKEGMDCNLLFWNGKVIDFELPITVQLTVVDVDP 138 Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223 GLKGDTAQGG+KPAT +DTGAVVNVPLFVN Sbjct: 139 GLKGDTAQGGTKPAT-------------------------------LDTGAVVNVPLFVN 167 Query: 222 TGDEILVDSRTGQYMSRA 169 G EILVD+RTGQYMSRA Sbjct: 168 IGAEILVDTRTGQYMSRA 185 >ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycine max] gi|255627395|gb|ACU14042.1| unknown [Glycine max] Length = 237 Score = 171 bits (433), Expect = 8e-41 Identities = 87/138 (63%), Positives = 98/138 (71%) Frame = -1 Query: 582 QFVFMDLSSYEEIRLNDKDVGDRKKWLKEGMDCTVLFWNGKVIDFDLPITVKLSVVSVDP 403 QFVFMDL++YEE RL +K++GDR KWLKEGMDC +L WNGKVID +LPIT+KL+VV VDP Sbjct: 131 QFVFMDLNTYEEFRLGEKEIGDRTKWLKEGMDCNLLLWNGKVIDVELPITIKLTVVDVDP 190 Query: 402 GLKGDTAQGGSKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTGAVVNVPLFVN 223 GLKGDTAQGG+KPAT +DT AVVNVPLFVN Sbjct: 191 GLKGDTAQGGTKPAT-------------------------------LDTNAVVNVPLFVN 219 Query: 222 TGDEILVDSRTGQYMSRA 169 GDEILVDSRTGQYMSRA Sbjct: 220 VGDEILVDSRTGQYMSRA 237