BLASTX nr result

ID: Coptis23_contig00020474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020474
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170863.1| PREDICTED: uncharacterized LOC101220391, par...   172   2e-41
ref|XP_004149267.1| PREDICTED: uncharacterized protein LOC101220...   172   2e-41
ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261...   171   6e-41
ref|XP_003547244.1| PREDICTED: uncharacterized protein LOC100789...   166   1e-39
ref|XP_003528674.1| PREDICTED: uncharacterized protein LOC100785...   164   5e-39

>ref|XP_004170863.1| PREDICTED: uncharacterized LOC101220391, partial [Cucumis sativus]
          Length = 294

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/97 (81%), Positives = 86/97 (88%)
 Frame = +2

Query: 2   GRNQWESLLCMLSSVIPNKDSIYEVNGSPITKHKGFLIFKFKDYNCTVEYYRAPFLVLQS 181
           GRNQWESLLCMLSS +PNK+SIYEVNGSPITKHKGFL+FKFKD+NCTVEYYRAPFLVLQS
Sbjct: 23  GRNQWESLLCMLSSAVPNKESIYEVNGSPITKHKGFLVFKFKDFNCTVEYYRAPFLVLQS 82

Query: 182 RXXXXXXXXXKTTLKLDKMDWSSVQWRDADILVFNTG 292
           R         KTTLKLD+MDWSS +WRDAD+LVFNTG
Sbjct: 83  RPPSGTSQEIKTTLKLDQMDWSSAKWRDADVLVFNTG 119


>ref|XP_004149267.1| PREDICTED: uncharacterized protein LOC101220391 [Cucumis sativus]
          Length = 441

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/97 (81%), Positives = 86/97 (88%)
 Frame = +2

Query: 2   GRNQWESLLCMLSSVIPNKDSIYEVNGSPITKHKGFLIFKFKDYNCTVEYYRAPFLVLQS 181
           GRNQWESLLCMLSS +PNK+SIYEVNGSPITKHKGFL+FKFKD+NCTVEYYRAPFLVLQS
Sbjct: 170 GRNQWESLLCMLSSAVPNKESIYEVNGSPITKHKGFLVFKFKDFNCTVEYYRAPFLVLQS 229

Query: 182 RXXXXXXXXXKTTLKLDKMDWSSVQWRDADILVFNTG 292
           R         KTTLKLD+MDWSS +WRDAD+LVFNTG
Sbjct: 230 RPPSGTSQEIKTTLKLDQMDWSSAKWRDADVLVFNTG 266


>ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261302 [Vitis vinifera]
           gi|297736996|emb|CBI26197.3| unnamed protein product
           [Vitis vinifera]
          Length = 446

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/97 (81%), Positives = 86/97 (88%)
 Frame = +2

Query: 2   GRNQWESLLCMLSSVIPNKDSIYEVNGSPITKHKGFLIFKFKDYNCTVEYYRAPFLVLQS 181
           GRNQWESLLCMLSS IPNK SIYEVNGSPITKHKGFL+FKFKD+NCTVEYYRAPFLVLQS
Sbjct: 170 GRNQWESLLCMLSSAIPNKTSIYEVNGSPITKHKGFLVFKFKDFNCTVEYYRAPFLVLQS 229

Query: 182 RXXXXXXXXXKTTLKLDKMDWSSVQWRDADILVFNTG 292
           R         +TTLKLD+MDWSS++WRDAD+LVFNTG
Sbjct: 230 RPPAGASKMIRTTLKLDQMDWSSMKWRDADVLVFNTG 266


>ref|XP_003547244.1| PREDICTED: uncharacterized protein LOC100789071 [Glycine max]
          Length = 439

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/97 (78%), Positives = 85/97 (87%)
 Frame = +2

Query: 2   GRNQWESLLCMLSSVIPNKDSIYEVNGSPITKHKGFLIFKFKDYNCTVEYYRAPFLVLQS 181
           GRNQWESLLCMLSS +PNK+SIYEVNGSPITKHKGFL+F+FKDYNCTVEYYRAPFLVLQS
Sbjct: 164 GRNQWESLLCMLSSGVPNKESIYEVNGSPITKHKGFLVFRFKDYNCTVEYYRAPFLVLQS 223

Query: 182 RXXXXXXXXXKTTLKLDKMDWSSVQWRDADILVFNTG 292
           R         +TTLKLD+MDW S++WRDAD+LV NTG
Sbjct: 224 RPPPRTDRKIRTTLKLDQMDWYSLKWRDADVLVLNTG 260


>ref|XP_003528674.1| PREDICTED: uncharacterized protein LOC100785144 [Glycine max]
          Length = 451

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/97 (78%), Positives = 84/97 (86%)
 Frame = +2

Query: 2   GRNQWESLLCMLSSVIPNKDSIYEVNGSPITKHKGFLIFKFKDYNCTVEYYRAPFLVLQS 181
           GRNQWESLLCMLSS +PNK+SIYEVNGSPITKHKGFL+FKFKD+NCTVEYYRAPFLVLQS
Sbjct: 173 GRNQWESLLCMLSSGVPNKESIYEVNGSPITKHKGFLVFKFKDFNCTVEYYRAPFLVLQS 232

Query: 182 RXXXXXXXXXKTTLKLDKMDWSSVQWRDADILVFNTG 292
           R         +TTLK+D MDW+S +WRDADILV NTG
Sbjct: 233 RPPTGAPENIRTTLKVDTMDWNSKKWRDADILVLNTG 269


Top