BLASTX nr result

ID: Coptis23_contig00020459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020459
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...    56   3e-06
emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]    56   3e-06

>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
 Frame = -2

Query: 202 VIVIVGTXXXXXXXXXXXXEDGEDDDAPNEIDEAKE----NEDKVSSPLVDSQSEKVISA 35
           V++I G+            EDGED  A  E+ + KE    +EDK S P+ DSQ EK IS+
Sbjct: 91  VVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISS 150

Query: 34  VQKALFLVFER 2
           VQKAL LVFER
Sbjct: 151 VQKALLLVFER 161


>emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
          Length = 709

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
 Frame = -2

Query: 202 VIVIVGTXXXXXXXXXXXXEDGEDDDAPNEIDEAKE----NEDKVSSPLVDSQSEKVISA 35
           V++I G+            EDGED  A  E+ + KE    +EDK S P+ DSQ EK IS+
Sbjct: 91  VVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISS 150

Query: 34  VQKALFLVFER 2
           VQKAL LVFER
Sbjct: 151 VQKALLLVFER 161


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