BLASTX nr result

ID: Coptis23_contig00020444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020444
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36799.3| unnamed protein product [Vitis vinifera]              322   8e-86
ref|XP_002284549.1| PREDICTED: protein AUXIN RESPONSE 4 [Vitis v...   322   8e-86
ref|XP_002319010.1| predicted protein [Populus trichocarpa] gi|2...   308   2e-81
ref|XP_002512384.1| conserved hypothetical protein [Ricinus comm...   306   8e-81
ref|XP_003554658.1| PREDICTED: protein AUXIN RESPONSE 4-like [Gl...   291   2e-76

>emb|CBI36799.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  322 bits (826), Expect = 8e-86
 Identities = 175/325 (53%), Positives = 209/325 (64%), Gaps = 5/325 (1%)
 Frame = +3

Query: 27   GSGFSDKSSLEENERWGGIW----DVYSEIKEKGLFWGFDQLVEQGRIPYEELETRVISS 194
            GSGFSDKS L E    GG+     +VYS I+EKG FW FD LVE G++PYEE++ +V   
Sbjct: 41   GSGFSDKSVLVEEMGDGGVLGRFSEVYSLIQEKGFFWAFDHLVETGQMPYEEIQIQVSKR 100

Query: 195  KSLKPLKFGSEEMGRVIGQVIDSMNLSPVHLVLHDSALGMCANWVSENVGVVSSLTLVDT 374
            KS+K L+ G EEMGRV+GQVIDS+ L+PVHLVLHDSALG+ ANWVSEN GVV S+TLVDT
Sbjct: 101  KSVKVLELGPEEMGRVLGQVIDSLGLAPVHLVLHDSALGIYANWVSENSGVVRSVTLVDT 160

Query: 375  SPXXXXXXXXXXXXXXXXEFVLGSSFVYSRLLRFCCSRMIESNVVEAHRALLNGRDGRRA 554
                              E VLG  FV++RLL  CC R I  + VEAHR LL GRDG RA
Sbjct: 161  MLGASALPLWPLGVPVVREVVLGFEFVFARLLNLCCVRKIPISDVEAHRVLLKGRDGARA 220

Query: 555  IVGVGKEMNFTFDLGKWAGMETVKSVPIQVLXXXXXXXXXXXXGNLVSSALPQARFIMHS 734
            +VG  K++N +FDL +W   E +K +P+QVL            G  V+ ALP A FI HS
Sbjct: 221  VVGTWKKLNSSFDLQEWGDSEGLKGLPVQVLWSSGWSKEWSEGGRKVADALPHATFITHS 280

Query: 735  GGRWPQEDAAEQITETITRFVSSLPKSNRQV-EEPVPEHVQKMLDEAKSXXXXXXXXXXX 911
            G RWPQEDAA+++ E I RFVSSLPKS RQV EEPVPEH+QKMLDEA+            
Sbjct: 281  GSRWPQEDAADELAENILRFVSSLPKSVRQVEEEPVPEHIQKMLDEAQG-GDHHHHHHHH 339

Query: 912  XXXXXXXXXXXAPSYMDAYGLGHGW 986
                       +  YM+AYGLGHGW
Sbjct: 340  DHGAHGHAHDHSDGYMNAYGLGHGW 364


>ref|XP_002284549.1| PREDICTED: protein AUXIN RESPONSE 4 [Vitis vinifera]
          Length = 474

 Score =  322 bits (826), Expect = 8e-86
 Identities = 175/325 (53%), Positives = 209/325 (64%), Gaps = 5/325 (1%)
 Frame = +3

Query: 27   GSGFSDKSSLEENERWGGIW----DVYSEIKEKGLFWGFDQLVEQGRIPYEELETRVISS 194
            GSGFSDKS L E    GG+     +VYS I+EKG FW FD LVE G++PYEE++ +V   
Sbjct: 149  GSGFSDKSVLVEEMGDGGVLGRFSEVYSLIQEKGFFWAFDHLVETGQMPYEEIQIQVSKR 208

Query: 195  KSLKPLKFGSEEMGRVIGQVIDSMNLSPVHLVLHDSALGMCANWVSENVGVVSSLTLVDT 374
            KS+K L+ G EEMGRV+GQVIDS+ L+PVHLVLHDSALG+ ANWVSEN GVV S+TLVDT
Sbjct: 209  KSVKVLELGPEEMGRVLGQVIDSLGLAPVHLVLHDSALGIYANWVSENSGVVRSVTLVDT 268

Query: 375  SPXXXXXXXXXXXXXXXXEFVLGSSFVYSRLLRFCCSRMIESNVVEAHRALLNGRDGRRA 554
                              E VLG  FV++RLL  CC R I  + VEAHR LL GRDG RA
Sbjct: 269  MLGASALPLWPLGVPVVREVVLGFEFVFARLLNLCCVRKIPISDVEAHRVLLKGRDGARA 328

Query: 555  IVGVGKEMNFTFDLGKWAGMETVKSVPIQVLXXXXXXXXXXXXGNLVSSALPQARFIMHS 734
            +VG  K++N +FDL +W   E +K +P+QVL            G  V+ ALP A FI HS
Sbjct: 329  VVGTWKKLNSSFDLQEWGDSEGLKGLPVQVLWSSGWSKEWSEGGRKVADALPHATFITHS 388

Query: 735  GGRWPQEDAAEQITETITRFVSSLPKSNRQV-EEPVPEHVQKMLDEAKSXXXXXXXXXXX 911
            G RWPQEDAA+++ E I RFVSSLPKS RQV EEPVPEH+QKMLDEA+            
Sbjct: 389  GSRWPQEDAADELAENILRFVSSLPKSVRQVEEEPVPEHIQKMLDEAQG-GDHHHHHHHH 447

Query: 912  XXXXXXXXXXXAPSYMDAYGLGHGW 986
                       +  YM+AYGLGHGW
Sbjct: 448  DHGAHGHAHDHSDGYMNAYGLGHGW 472


>ref|XP_002319010.1| predicted protein [Populus trichocarpa] gi|222857386|gb|EEE94933.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  308 bits (788), Expect = 2e-81
 Identities = 163/330 (49%), Positives = 209/330 (63%), Gaps = 9/330 (2%)
 Frame = +3

Query: 27   GSGFSDKSSLEENERWGGIW----DVYSEIKEKGLFWGFDQLVEQGRIPYEELETRVISS 194
            G+GFSDK      ER  G++    D Y+ IKEKG+FW FD +VE G+IPYEE+ +     
Sbjct: 131  GNGFSDKFMEASEERGNGVFERFKDAYALIKEKGIFWAFDNMVETGQIPYEEIVSHYSEK 190

Query: 195  KSL-KPLKFGSEEMGRVIGQVIDSMNLSPVHLVLHDSALGMCANWVSENVGVVSSLTLVD 371
            KS+ KP+  GSEE G V+GQVI+++ L+PVHLVLHDS+LGM ANWV +N   + S+TLVD
Sbjct: 191  KSVVKPIVLGSEETGLVLGQVIETLGLAPVHLVLHDSSLGMVANWVLKNSESIRSVTLVD 250

Query: 372  TSPXXXXXXXXXXXXXXXXEFVLGSSFVYSRLLRFCCSRMIESNVVEAHRALLNGRDGRR 551
            T                  E VLG +FVY  L+R CCSR I S  V AHR +LNGRDGRR
Sbjct: 251  TG-LRPALPLCVLEVPVVREVVLGVNFVYEWLIRMCCSRGIGSLDVAAHRMMLNGRDGRR 309

Query: 552  AIVGVGKEMNFTFDLGKWAGMETVKSVPIQVLXXXXXXXXXXXXGNLVSSALPQARFIMH 731
            A+V  GK++N +FD+ +W G++ VK +P+QV+            G  V+ ALPQA+F+ H
Sbjct: 310  AVVATGKKLNSSFDIAEWGGLDGVKGIPMQVVWCSGWSKEWSEEGRKVADALPQAKFVTH 369

Query: 732  SGGRWPQEDAAEQITETITRFVSSLPKSNRQV-EEPVPEHVQKMLDEAKS---XXXXXXX 899
            +GGRWPQE+AA+++ E I +FVSSLPKS R+V EEP+PEH+QKMLDEAK           
Sbjct: 370  TGGRWPQENAADELAENIVKFVSSLPKSVRRVEEEPIPEHIQKMLDEAKDGHHHHHGHGG 429

Query: 900  XXXXXXXXXXXXXXXAPSYMDAYGLGHGWG 989
                              YMDAYGLGHGWG
Sbjct: 430  HGHHDGHGHAHAQTHGAGYMDAYGLGHGWG 459


>ref|XP_002512384.1| conserved hypothetical protein [Ricinus communis]
            gi|223548345|gb|EEF49836.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 473

 Score =  306 bits (783), Expect = 8e-81
 Identities = 160/327 (48%), Positives = 210/327 (64%), Gaps = 6/327 (1%)
 Frame = +3

Query: 27   GSGFSDKSSLEENERWGGIW----DVYSEIKEKGLFWGFDQLVEQGRIPYEELETRVISS 194
            G+GFSDKS     ER  G++    D YS IKEKGLFW FD +VE G IPYE++ +   + 
Sbjct: 157  GTGFSDKSIEVHEERGNGVFERLFDAYSLIKEKGLFWAFDNMVETGEIPYEKILSHYSTL 216

Query: 195  KSL-KPLKFGSEEMGRVIGQVIDSMNLSPVHLVLHDSALGMCANWVSENVGVVSSLTLVD 371
            KS+ KP+  G EE+G+V+GQVI++M L+PVHLVLHDS+LGM ANWV EN  +V S+TL+D
Sbjct: 217  KSVAKPIVLGGEEVGKVLGQVIETMGLAPVHLVLHDSSLGMVANWVLENSELVRSVTLLD 276

Query: 372  TSPXXXXXXXXXXXXXXXXEFVLGSSFVYSRLLRFCCSRMIESNVVEAHRALLNGRDGRR 551
            T                  E VLGS+F + RL+  CCS+ I    +EAHR +L GRDGRR
Sbjct: 277  TGSRPALPLWVLEMPIVR-EIVLGSNFAFQRLIELCCSKGIGGLDLEAHRVILKGRDGRR 335

Query: 552  AIVGVGKEMNFTFDLGKWAGMETVKSVPIQVLXXXXXXXXXXXXGNLVSSALPQARFIMH 731
            A+VG GK++N +F + +W G + ++ +PIQV+            G  V+ ALP A+F++H
Sbjct: 336  AVVGTGKKLNSSFSIPQWGGSDGIRGLPIQVIWSNSWSIEWSEEGRRVAEALPHAKFVLH 395

Query: 732  SGGRWPQEDAAEQITETITRFVSSLPKSNRQVE-EPVPEHVQKMLDEAKSXXXXXXXXXX 908
            SGGRW QEDAA+++ E I +FVSSLPKS+R+VE E +PEH+QKM +EAK           
Sbjct: 396  SGGRWSQEDAADEVAENIIKFVSSLPKSDRKVEGESIPEHIQKMFEEAKE---------- 445

Query: 909  XXXXXXXXXXXXAPSYMDAYGLGHGWG 989
                        A SYMDAYGLGHGWG
Sbjct: 446  GDHHHHGHAHLHASSYMDAYGLGHGWG 472


>ref|XP_003554658.1| PREDICTED: protein AUXIN RESPONSE 4-like [Glycine max]
          Length = 480

 Score =  291 bits (746), Expect = 2e-76
 Identities = 164/329 (49%), Positives = 211/329 (64%), Gaps = 10/329 (3%)
 Frame = +3

Query: 27   GSGFSDKS---SLEE-NERWGGIWDVYSEIKEKGLFWGFDQLVEQGRIPYEELETRVISS 194
            G GFSDKS   S+E  N  +G  W VYSEI+E+GLFW FDQ+VE G+IPYEE++ R+   
Sbjct: 150  GHGFSDKSVEASVEGVNGVFGRFWYVYSEIQERGLFWAFDQMVETGQIPYEEIQARMSKR 209

Query: 195  KSLKPLKFGSEEMGRVIGQVIDSMNLSPVHLVLHDSALGMCANWVSENVGVVSSLTLVDT 374
            K+ KP+  G +EMG+V+G+VIDSM L+PVHLVLHDSALG+ AN+VSE   +V S+TL+DT
Sbjct: 210  KTRKPIDLGPQEMGKVLGEVIDSMGLAPVHLVLHDSALGLSANFVSERPELVRSVTLIDT 269

Query: 375  -SPXXXXXXXXXXXXXXXXEFVLGSSFVYSRLLRFCCSRMIESNVVEAHRALLNGRDGRR 551
             S                 E VLG SFV+++++  CCS+ +     EA RALL GRDGRR
Sbjct: 270  ASSTKGAFPVWALEVPVVREVVLGVSFVFAKVVALCCSKRVGVADSEASRALLKGRDGRR 329

Query: 552  AIVGVGKEMNFTFDLGKWAGMETVKSVPIQVLXXXXXXXXXXXXGNLVSSALPQARFIMH 731
            A+V VGK +N +F L +W   E +K +P+QV+            G+ V+ ALPQA F+ H
Sbjct: 330  AVVNVGKRVNSSFGLEEWG--EGLKGMPMQVMWSAGWSEEWSQEGHRVADALPQASFVTH 387

Query: 732  SGGRWPQEDAAEQITETITRFVSSLPKSNRQVE-EPVPEHVQKMLDEAKSXXXXXXXXXX 908
            +GGRW QEDAA +I E I++FV SLPKS R+VE E +PEH+QKMLDEAKS          
Sbjct: 388  TGGRWAQEDAAVEIAEKISQFVLSLPKSVRKVEQESIPEHIQKMLDEAKSSGHDHHHHHS 447

Query: 909  XXXXXXXXXXXXA----PSYMDAYGLGHG 983
                        A     +YMDAYGLGHG
Sbjct: 448  HDHGHGHDHYGDAHIHGANYMDAYGLGHG 476


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