BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020431
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18893.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   143   1e-32
ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   132   4e-29
ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth...   124   1e-26

>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/110 (63%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
 Frame = -1

Query: 322 VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTCHCYRTPIYVGG 152
           V G+ECS+ ++ E  + +    +GLQD+E+   F    EKV +PC L   CYRT IY+GG
Sbjct: 295 VDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGG 354

Query: 151 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGR 2
           RYLKYSRNVSQTRWIIDDERMGEASVEEIIG  I+P+C GD YKFHAAGR
Sbjct: 355 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGR 404


>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
           vinifera]
          Length = 578

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/110 (63%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
 Frame = -1

Query: 322 VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTCHCYRTPIYVGG 152
           V G+ECS+ ++ E  + +    +GLQD+E+   F    EKV +PC L   CYRT IY+GG
Sbjct: 282 VDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGG 341

Query: 151 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGR 2
           RYLKYSRNVSQTRWIIDDERMGEASVEEIIG  I+P+C GD YKFHAAGR
Sbjct: 342 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGR 391


>ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|222857212|gb|EEE94759.1|
           predicted protein [Populus trichocarpa]
          Length = 520

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/108 (62%), Positives = 77/108 (71%), Gaps = 3/108 (2%)
 Frame = -1

Query: 316 GLECSEDASGEVGSAMDTSLNGL---QDSESFNSAPEKVKEPCCLTCHCYRTPIYVGGRY 146
           G  C + + G+   A   S  GL   + SE  N   E+V EPC L   CYRTPIY GGRY
Sbjct: 226 GTGCCDLSLGQGSPASGRSSTGLAEHESSECSNFPLERVNEPCHLVFLCYRTPIYFGGRY 285

Query: 145 LKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGR 2
           LK+SRNVSQTRWIIDDERMGEAS+EEIIG  I+P+C+GD YKFHAAGR
Sbjct: 286 LKFSRNVSQTRWIIDDERMGEASIEEIIGGNILPMCQGDSYKFHAAGR 333


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
           gi|223551325|gb|EEF52811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/91 (70%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -1

Query: 268 DTSLNGLQDSESFNSA--PEKVKEPCCLTCHCYRTPIYVGGRYLKYSRNVSQTRWIIDDE 95
           ++S  GL++ ES       EKVKEPC L   CYRTPIY GGRYLK+SRNVSQTRWIIDDE
Sbjct: 288 ESSFCGLENHESSECIFPKEKVKEPCNLLFLCYRTPIYFGGRYLKFSRNVSQTRWIIDDE 347

Query: 94  RMGEASVEEIIGNTIIPICRGDKYKFHAAGR 2
           RMGEAS+EEIIG +I P+C+GD YKFHAAGR
Sbjct: 348 RMGEASIEEIIGGSIFPMCQGDSYKFHAAGR 378


>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
           max]
          Length = 484

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/105 (58%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
 Frame = -1

Query: 307 CSEDASGEVGSAMDTSLNGLQDSESFNSAP---EKVKEPCCLTCHCYRTPIYVGGRYLKY 137
           C     GE     + S +   +++S +      EK  EPC  T  CYRTP Y GGRYLKY
Sbjct: 194 CKRRKIGEPSIVGERSFSSTLENDSSDCCKFLLEKANEPCHFTYSCYRTPFYFGGRYLKY 253

Query: 136 SRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGR 2
           SRNVSQTRWIIDDERMGEASVEEIIG  I+  C+GD +KFHAAGR
Sbjct: 254 SRNVSQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGR 298