BLASTX nr result

ID: Coptis23_contig00020425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020425
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|...   213   2e-53
emb|CBI34639.3| unnamed protein product [Vitis vinifera]              208   6e-52
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   208   6e-52
ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2...   208   6e-52
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...   207   1e-51

>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
            transporter, putative [Ricinus communis]
          Length = 957

 Score =  213 bits (542), Expect = 2e-53
 Identities = 101/146 (69%), Positives = 117/146 (80%)
 Frame = -1

Query: 646  KLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLI 467
            KL+ +DYY+EP IQELAAKE+A+PGFC HVKDFVVGR+GYGSIKF+G+TDVR LDL SL+
Sbjct: 785  KLRRSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGETDVRRLDLESLV 844

Query: 466  HPNNRVVVVYTDKCKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXX 287
              NNR V+VYTD  K P +G+GLNKPAEVTLLNI CFDKKTG+QYTEG            
Sbjct: 845  QFNNREVIVYTDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQYTEGAKIEKYKEMLKR 904

Query: 286  KTQEHGAEFISYEPSNGEWKFRVNHF 209
            K +E GAEF+SY+P  GEWKFRVNHF
Sbjct: 905  KAEEQGAEFVSYDPVKGEWKFRVNHF 930


>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  208 bits (530), Expect = 6e-52
 Identities = 99/146 (67%), Positives = 115/146 (78%)
 Frame = -1

Query: 646  KLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLI 467
            KL+ +DYY+EP IQELAAKE+A+PGFC  VKDFVVGR+GYGSIKF+G+TDVR LDL SL+
Sbjct: 881  KLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLESLV 940

Query: 466  HPNNRVVVVYTDKCKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXX 287
              NNR V+VY D  K P +G+GLNKPAEVTLLNI CFDKKTG QYTEGP           
Sbjct: 941  QFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEMLKR 1000

Query: 286  KTQEHGAEFISYEPSNGEWKFRVNHF 209
            K ++ GAEF+SY+P  GEWKFRVNHF
Sbjct: 1001 KAEDQGAEFVSYDPMKGEWKFRVNHF 1026


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Vitis vinifera]
          Length = 1013

 Score =  208 bits (530), Expect = 6e-52
 Identities = 99/146 (67%), Positives = 115/146 (78%)
 Frame = -1

Query: 646  KLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLI 467
            KL+ +DYY+EP IQELAAKE+A+PGFC  VKDFVVGR+GYGSIKF+G+TDVR LDL SL+
Sbjct: 847  KLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLESLV 906

Query: 466  HPNNRVVVVYTDKCKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXX 287
              NNR V+VY D  K P +G+GLNKPAEVTLLNI CFDKKTG QYTEGP           
Sbjct: 907  QFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEMLKR 966

Query: 286  KTQEHGAEFISYEPSNGEWKFRVNHF 209
            K ++ GAEF+SY+P  GEWKFRVNHF
Sbjct: 967  KAEDQGAEFVSYDPMKGEWKFRVNHF 992


>ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1|
            predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  208 bits (530), Expect = 6e-52
 Identities = 98/146 (67%), Positives = 116/146 (79%)
 Frame = -1

Query: 646  KLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLI 467
            KL+ +DY++EP IQELAAKE+AKPGFC HVKDFVVGR+GYGSIKF G+TDVR LDL SL+
Sbjct: 842  KLRRSDYFTEPRIQELAAKERAKPGFCRHVKDFVVGRHGYGSIKFSGETDVRRLDLESLV 901

Query: 466  HPNNRVVVVYTDKCKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXX 287
              NNR V+VY D  K P +G+GLNKPAEVTLLNI CFDKKTG+Q+TEGP           
Sbjct: 902  QFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQFTEGPKIEKYKEMLKR 961

Query: 286  KTQEHGAEFISYEPSNGEWKFRVNHF 209
            K ++ GAEF+SY+P  GEWKF+VNHF
Sbjct: 962  KAEDQGAEFVSYDPVKGEWKFKVNHF 987


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score =  207 bits (528), Expect = 1e-51
 Identities = 97/146 (66%), Positives = 115/146 (78%)
 Frame = -1

Query: 646  KLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLI 467
            KL+ +DYY+ P I ELAAKE+A+PGFC HVKDFVVGR GYGSI+F+G+TD+RGLDL SLI
Sbjct: 845  KLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGETDIRGLDLESLI 904

Query: 466  HPNNRVVVVYTDKCKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXX 287
              NNR V+VY D  K P +G+GLNKPAEVTLLNI CFDKKTG QYTEGP           
Sbjct: 905  QFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGHQYTEGPKIEKYKEMLKR 964

Query: 286  KTQEHGAEFISYEPSNGEWKFRVNHF 209
            KT++ GAEF+SY+P+ GEWK RV+HF
Sbjct: 965  KTEDQGAEFVSYDPTKGEWKIRVSHF 990


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