BLASTX nr result

ID: Coptis23_contig00020419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020419
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268351.1| PREDICTED: uncharacterized protein LOC100267...   240   3e-61
ref|XP_003593271.1| hypothetical protein MTR_2g009630 [Medicago ...   239   6e-61
gb|ACJ85902.1| unknown [Medicago truncatula]                          239   6e-61
ref|NP_849487.1| uncharacterized protein [Arabidopsis thaliana] ...   233   5e-59
ref|NP_001119110.1| uncharacterized protein [Arabidopsis thalian...   233   5e-59

>ref|XP_002268351.1| PREDICTED: uncharacterized protein LOC100267500 [Vitis vinifera]
           gi|296087430|emb|CBI34019.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  240 bits (613), Expect = 3e-61
 Identities = 115/176 (65%), Positives = 142/176 (80%), Gaps = 5/176 (2%)
 Frame = -1

Query: 889 MANNNDD-----IESSSSVNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRS 725
           MA N D+       SS+S    + R R DP L++CRCF  +T+LTAILCI VNV++AVRS
Sbjct: 1   MAGNGDEEGLPRAASSTSGAAARVRARGDPLLIVCRCFSFITALTAILCICVNVLSAVRS 60

Query: 724 FKNSSDIFDVIFRCYVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAF 545
           FK+ SD+FD IFRCY +V A+FV++AETEW F  KFW++LEYWAGRGMLQIFVAVMTRAF
Sbjct: 61  FKDGSDVFDGIFRCYAVVIALFVVVAETEWGFIMKFWKMLEYWAGRGMLQIFVAVMTRAF 120

Query: 544 PEANKKRKDLLLLQEIASYLLIACGVIYIILGVLCIGFLKRARQVKEVTRDQAAKD 377
           P  + K+KDL+LLQ IASY+L+ACG+IY+I G+LCIGFLKRARQ KEV+R+QA KD
Sbjct: 121 PNESSKQKDLVLLQNIASYMLLACGLIYVISGILCIGFLKRARQKKEVSREQAIKD 176


>ref|XP_003593271.1| hypothetical protein MTR_2g009630 [Medicago truncatula]
           gi|87162749|gb|ABD28544.1| hypothetical protein
           MtrDRAFT_AC148971g6v2 [Medicago truncatula]
           gi|355482319|gb|AES63522.1| hypothetical protein
           MTR_2g009630 [Medicago truncatula]
           gi|388496300|gb|AFK36216.1| unknown [Medicago
           truncatula]
          Length = 197

 Score =  239 bits (610), Expect = 6e-61
 Identities = 109/162 (67%), Positives = 136/162 (83%)
 Frame = -1

Query: 862 SSSSVNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 683
           SSSS + R+   R DPFL++CRCF L+TSL AILC+ VNV++AVRSFKN + IFD IFRC
Sbjct: 18  SSSSSSTRRVERRADPFLIVCRCFSLITSLAAILCVAVNVLSAVRSFKNPNTIFDGIFRC 77

Query: 682 YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLLLLQ 503
           Y ++ A+FV++ ETEW F  KFW+VLEYWAGRGMLQIF AVMTRAFP+ N +RKDL++LQ
Sbjct: 78  YAVLIAIFVVLVETEWSFIIKFWQVLEYWAGRGMLQIFAAVMTRAFPDYNGERKDLVILQ 137

Query: 502 EIASYLLIACGVIYIILGVLCIGFLKRARQVKEVTRDQAAKD 377
            IA YLL++CGV+Y+I GVLC+GFLKR RQ +E+TR+QAAKD
Sbjct: 138 NIACYLLLSCGVVYVISGVLCVGFLKRRRQKQEITREQAAKD 179


>gb|ACJ85902.1| unknown [Medicago truncatula]
          Length = 191

 Score =  239 bits (610), Expect = 6e-61
 Identities = 109/162 (67%), Positives = 136/162 (83%)
 Frame = -1

Query: 862 SSSSVNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 683
           SSSS + R+   R DPFL++CRCF L+TSL AILC+ VNV++AVRSFKN + IFD IFRC
Sbjct: 18  SSSSSSTRRVERRADPFLIVCRCFSLITSLAAILCVAVNVLSAVRSFKNPNTIFDGIFRC 77

Query: 682 YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLLLLQ 503
           Y ++ A+FV++ ETEW F  KFW+VLEYWAGRGMLQIF AVMTRAFP+ N +RKDL++LQ
Sbjct: 78  YAVLIAIFVVLVETEWSFIIKFWQVLEYWAGRGMLQIFAAVMTRAFPDYNGERKDLVILQ 137

Query: 502 EIASYLLIACGVIYIILGVLCIGFLKRARQVKEVTRDQAAKD 377
            IA YLL++CGV+Y+I GVLC+GFLKR RQ +E+TR+QAAKD
Sbjct: 138 NIACYLLLSCGVVYVISGVLCVGFLKRRRQKQEITREQAAKD 179


>ref|NP_849487.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26451440|dbj|BAC42819.1| unknown protein [Arabidopsis
           thaliana] gi|107738160|gb|ABF83652.1| At4g33625
           [Arabidopsis thaliana] gi|332660855|gb|AEE86255.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 200

 Score =  233 bits (594), Expect = 5e-59
 Identities = 115/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 862 SSSSVNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 683
           SS S  L+    R DPFLV+CRCF LVTSL AILC+ VNV+ AVRSF++S D+FD IFRC
Sbjct: 15  SSGSAKLKLGN-RADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIFRC 73

Query: 682 YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLLLLQ 503
           Y +V A FV++ ETEW F  KF +VLEYWAGRGMLQIFVAVMTRAFP+   ++KDLLLLQ
Sbjct: 74  YAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLLLQ 133

Query: 502 EIASYLLIACGVIYIILGVLCIGFLKRARQVKEVTRDQAAKD 377
            IASYLL+ACGVIY+I GVLCIGFLKRARQ KEV+R+QA KD
Sbjct: 134 NIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKD 175


>ref|NP_001119110.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332660856|gb|AEE86256.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 199

 Score =  233 bits (594), Expect = 5e-59
 Identities = 115/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 862 SSSSVNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 683
           SS S  L+    R DPFLV+CRCF LVTSL AILC+ VNV+ AVRSF++S D+FD IFRC
Sbjct: 15  SSGSAKLKLGN-RADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIFRC 73

Query: 682 YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLLLLQ 503
           Y +V A FV++ ETEW F  KF +VLEYWAGRGMLQIFVAVMTRAFP+   ++KDLLLLQ
Sbjct: 74  YAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLLLQ 133

Query: 502 EIASYLLIACGVIYIILGVLCIGFLKRARQVKEVTRDQAAKD 377
            IASYLL+ACGVIY+I GVLCIGFLKRARQ KEV+R+QA KD
Sbjct: 134 NIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKD 175


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