BLASTX nr result

ID: Coptis23_contig00020402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020402
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like ...   137   2e-30
emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]   135   6e-30
ref|XP_002262764.1| PREDICTED: transcription factor bHLH25-like ...   129   3e-28
ref|XP_003635290.1| PREDICTED: transcription factor bHLH25-like,...   127   1e-27
emb|CBI14785.3| unnamed protein product [Vitis vinifera]              127   1e-27

>ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 365

 Score =  137 bits (344), Expect = 2e-30
 Identities = 95/211 (45%), Positives = 119/211 (56%), Gaps = 7/211 (3%)
 Frame = -2

Query: 614 EDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSC---ETFSSHPTFNPLISTNTIGHS 444
           +D  FI    +NSL +FT Q +  A  ED   P      E++SS+PT NP  ++ T   S
Sbjct: 15  DDYNFIDPCHVNSLDEFTTQHITTALREDLRAPSLSSDHESYSSYPTLNPETTSTTFSAS 74

Query: 443 SSLELEASRTCFERPKKQLKSDSRDSCTTER-ISTPEASSSPNMLSFGNSNSPET--HHQ 273
           S   +E   T F RP KQLK++S  S T +  I  P  SSS ++LSF N+ SP     HQ
Sbjct: 75  S---IEPHYTSFGRPAKQLKTNSWSSDTKQHVIPKPPPSSSSSLLSFMNNGSPPAVNTHQ 131

Query: 272 SYGSSVGAAKPKYEVVXXXXXXXXXXXXXXQGTHVNQNYAQKY-QGNKRASTPTTKPPSY 96
            YG      KPK EV+               G++ NQNY  K  QG KR  TP  +  S+
Sbjct: 132 YYGDCT--MKPKDEVISHGNVNFPSQISK--GSYENQNYVPKANQGTKRV-TPMRRTSSH 186

Query: 95  TQDHILAERRRREKLSQRFIALSAIVPGLKK 3
            QDHI+AER+RREKLSQRFIALSA+VPGLKK
Sbjct: 187 AQDHIMAERKRREKLSQRFIALSALVPGLKK 217


>emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]
          Length = 365

 Score =  135 bits (340), Expect = 6e-30
 Identities = 94/211 (44%), Positives = 118/211 (55%), Gaps = 7/211 (3%)
 Frame = -2

Query: 614 EDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSC---ETFSSHPTFNPLISTNTIGHS 444
           +D  FI    +NSL +FT Q +  A  ED   P      E++SS+PT NP  ++ T   S
Sbjct: 15  DDYNFIDPCHVNSLDEFTTQHITTALREDLRAPSLSSDHESYSSYPTLNPETTSTTFSAS 74

Query: 443 SSLELEASRTCFERPKKQLKSDSRDSCTTER-ISTPEASSSPNMLSFGNSNSPET--HHQ 273
           S   +E     F RP KQLK++S  S T +  I  P  SSS ++LSF N+ SP     HQ
Sbjct: 75  S---IETHYASFGRPAKQLKTNSWSSDTKQHVIPKPPPSSSSSLLSFMNNGSPPAVNTHQ 131

Query: 272 SYGSSVGAAKPKYEVVXXXXXXXXXXXXXXQGTHVNQNYAQKY-QGNKRASTPTTKPPSY 96
            YG      KPK EV+               G++ NQNY  K  QG KR  TP  +  S+
Sbjct: 132 YYGDCT--MKPKDEVISHGNVNFPSQISK--GSYENQNYVPKANQGTKRV-TPMRRTSSH 186

Query: 95  TQDHILAERRRREKLSQRFIALSAIVPGLKK 3
            QDHI+AER+RREKLSQRFIALSA+VPGLKK
Sbjct: 187 AQDHIMAERKRREKLSQRFIALSALVPGLKK 217


>ref|XP_002262764.1| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 358

 Score =  129 bits (325), Expect = 3e-28
 Identities = 87/211 (41%), Positives = 119/211 (56%), Gaps = 7/211 (3%)
 Frame = -2

Query: 614 EDPTFIHQYQM----NSLCDFTPQQLGAAFGEDFHHPYSCETFSSHPTFNPLISTNTIGH 447
           EDPTFIHQYQM    NSL  F                +S E+ SS+P+F+P  + N  G 
Sbjct: 15  EDPTFIHQYQMPPFDNSLDGFN------------FDSFSSESNSSYPSFSPETTPNFCG- 61

Query: 446 SSSLELEASRTCFERPKKQLKSDSRDSCTTERISTPEASSSP-NMLSFGNSNSPETHH-- 276
            S++E   +     RP KQLK++S DSCT E I++ ++SSS   ++SFGNSN P      
Sbjct: 62  -STIEYFQAAGVVGRPSKQLKTNSWDSCTAEPITSRKSSSSSVQLISFGNSNLPPPTDTL 120

Query: 275 QSYGSSVGAAKPKYEVVXXXXXXXXXXXXXXQGTHVNQNYAQKYQGNKRASTPTTKPPSY 96
           + +G     AKPK E                +G++ NQNY+ K     +  + TT+ P  
Sbjct: 121 KFHGHQDKKAKPKNEA--SSDRNMKFASLISEGSYENQNYSPKSGDRTKRVSSTTRNPLN 178

Query: 95  TQDHILAERRRREKLSQRFIALSAIVPGLKK 3
             DH++AER+RREKL+QRFIALSA+VPGL+K
Sbjct: 179 NHDHVVAERKRREKLTQRFIALSALVPGLRK 209


>ref|XP_003635290.1| PREDICTED: transcription factor bHLH25-like, partial [Vitis
           vinifera]
          Length = 233

 Score =  127 bits (320), Expect = 1e-27
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 7/211 (3%)
 Frame = -2

Query: 614 EDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSCETFSSHPTFNPLISTNTIGHSSSL 435
           EDPTFIHQYQM S  +  P   G  F       +S +++SS+ +F+P  + ++       
Sbjct: 15  EDPTFIHQYQMQSFGN--PVDHGFNF-----QSFSSDSYSSYLSFSPKTTLSSA------ 61

Query: 434 ELEASRTCFERPKKQLKSDSRDSCTTERISTPEASSSPN--MLSFGNSNSP-----ETHH 276
            +E  +T  ER  KQLK++S +S T+ RI TP+ASSS +  +LSFGNSNSP     +  H
Sbjct: 62  -VENFQTDIERTAKQLKTNSWESSTSNRI-TPKASSSSSSQLLSFGNSNSPLPTDVQNFH 119

Query: 275 QSYGSSVGAAKPKYEVVXXXXXXXXXXXXXXQGTHVNQNYAQKYQGNKRASTPTTKPPSY 96
           ++   +V   KPK E                  ++ NQN+     G KR  TP T+ P  
Sbjct: 120 ENLDCTV---KPKDEAASHGNMNFASVISK--SSYGNQNHGH---GTKRVGTPITRNPLN 171

Query: 95  TQDHILAERRRREKLSQRFIALSAIVPGLKK 3
            QDH++AER+RREKL+QRFIALSAIVPGLKK
Sbjct: 172 NQDHVIAERKRREKLTQRFIALSAIVPGLKK 202


>emb|CBI14785.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  127 bits (320), Expect = 1e-27
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 7/211 (3%)
 Frame = -2

Query: 614 EDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSCETFSSHPTFNPLISTNTIGHSSSL 435
           EDPTFIHQYQM S  +  P   G  F       +S +++SS+ +F+P  + ++       
Sbjct: 10  EDPTFIHQYQMQSFGN--PVDHGFNF-----QSFSSDSYSSYLSFSPKTTLSSA------ 56

Query: 434 ELEASRTCFERPKKQLKSDSRDSCTTERISTPEASSSPN--MLSFGNSNSP-----ETHH 276
            +E  +T  ER  KQLK++S +S T+ RI TP+ASSS +  +LSFGNSNSP     +  H
Sbjct: 57  -VENFQTDIERTAKQLKTNSWESSTSNRI-TPKASSSSSSQLLSFGNSNSPLPTDVQNFH 114

Query: 275 QSYGSSVGAAKPKYEVVXXXXXXXXXXXXXXQGTHVNQNYAQKYQGNKRASTPTTKPPSY 96
           ++   +V   KPK E                  ++ NQN+     G KR  TP T+ P  
Sbjct: 115 ENLDCTV---KPKDEAASHGNMNFASVISK--SSYGNQNHGH---GTKRVGTPITRNPLN 166

Query: 95  TQDHILAERRRREKLSQRFIALSAIVPGLKK 3
            QDH++AER+RREKL+QRFIALSAIVPGLKK
Sbjct: 167 NQDHVIAERKRREKLTQRFIALSAIVPGLKK 197


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