BLASTX nr result

ID: Coptis23_contig00020399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020399
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278704.1| PREDICTED: uncharacterized protein LOC100247...   323   5e-86
emb|CBI26577.3| unnamed protein product [Vitis vinifera]              310   5e-82
ref|XP_002519986.1| conserved hypothetical protein [Ricinus comm...   278   1e-72
ref|XP_002886801.1| hypothetical protein ARALYDRAFT_315473 [Arab...   274   3e-71
ref|NP_566028.1| uncharacterized protein [Arabidopsis thaliana] ...   267   4e-69

>ref|XP_002278704.1| PREDICTED: uncharacterized protein LOC100247606 [Vitis vinifera]
          Length = 244

 Score =  323 bits (828), Expect = 5e-86
 Identities = 156/246 (63%), Positives = 188/246 (76%), Gaps = 1/246 (0%)
 Frame = +2

Query: 62  MTTNLPWHHPLLLQPKS-QQINFTTRRHVSTQTQAFRRSDFDGFAKKVASGEVWKDAWRS 238
           MTT+LPWH     +P++ ++     R  +    +AFRRSDFDGFAK++ASG+ W+DAWRS
Sbjct: 1   MTTSLPWHPLFSSKPQTLRRFAAPVRHRLPMPVRAFRRSDFDGFAKRMASGDAWRDAWRS 60

Query: 239 ANDGFEQLVYDAKKAAERIDRQYXXXXXXXXXXXXXKYKARELDREYEIGQKWKSFSLDF 418
           ANDGFE L+++AKK AERI+RQY                ARE+DRE+EIG++W++ +LDF
Sbjct: 61  ANDGFELLIFEAKKTAERINRQYAVSRRFSEAVGSAGDWAREVDREFEIGRRWRTVTLDF 120

Query: 419 SRNLPGYRKQLNDSLSTPLGRSFATIFFLWFALSGWLFRILFFATWVLPFAAPLLIRTIA 598
            RN P YRKQLND L TPLGRSFATIFFLWFALSGWLFR L FATWVLPFA PLLI T A
Sbjct: 121 GRNWPRYRKQLNDFLDTPLGRSFATIFFLWFALSGWLFRFLIFATWVLPFAGPLLIGTFA 180

Query: 599 NNFVIEGACPACKKRFVGYKNQTINCTSCGSTVWQPKGDSFSRGGKATPPSSTSQSDIID 778
           NNFVI+G CPAC+++F+GYKNQ + C  CG+ VWQPKGD  SRG + TPPSS SQS+IID
Sbjct: 181 NNFVIKGNCPACRRQFIGYKNQIVRCAGCGNIVWQPKGD-VSRGSRGTPPSS-SQSEIID 238

Query: 779 VEFEEK 796
           VEFEEK
Sbjct: 239 VEFEEK 244


>emb|CBI26577.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  310 bits (793), Expect = 5e-82
 Identities = 147/213 (69%), Positives = 172/213 (80%)
 Frame = +2

Query: 158 QAFRRSDFDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQYXXXXXXXXXX 337
           +AFRRSDFDGFAK++ASG+ W+DAWRSANDGFE L+++AKK AERI+RQY          
Sbjct: 4   RAFRRSDFDGFAKRMASGDAWRDAWRSANDGFELLIFEAKKTAERINRQYAVSRRFSEAV 63

Query: 338 XXXKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRSFATIFFLWFAL 517
                 ARE+DRE+EIG++W++ +LDF RN P YRKQLND L TPLGRSFATIFFLWFAL
Sbjct: 64  GSAGDWAREVDREFEIGRRWRTVTLDFGRNWPRYRKQLNDFLDTPLGRSFATIFFLWFAL 123

Query: 518 SGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQTINCTSCGSTV 697
           SGWLFR L FATWVLPFA PLLI T ANNFVI+G CPAC+++F+GYKNQ + C  CG+ V
Sbjct: 124 SGWLFRFLIFATWVLPFAGPLLIGTFANNFVIKGNCPACRRQFIGYKNQIVRCAGCGNIV 183

Query: 698 WQPKGDSFSRGGKATPPSSTSQSDIIDVEFEEK 796
           WQPKGD  SRG + TPPSS SQS+IIDVEFEEK
Sbjct: 184 WQPKGD-VSRGSRGTPPSS-SQSEIIDVEFEEK 214


>ref|XP_002519986.1| conserved hypothetical protein [Ricinus communis]
           gi|223540750|gb|EEF42310.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score =  278 bits (712), Expect = 1e-72
 Identities = 147/248 (59%), Positives = 174/248 (70%), Gaps = 3/248 (1%)
 Frame = +2

Query: 62  MTTNLPWHHP---LLLQPKSQQINFTTRRHVSTQTQAFRRSDFDGFAKKVASGEVWKDAW 232
           M T LPW  P    LL+ +         RHV T  +AF+R DFD  A+         +AW
Sbjct: 1   MATTLPWRQPPFPTLLKKRCP----AAFRHVGT-VRAFQRGDFDRLAR---------NAW 46

Query: 233 RSANDGFEQLVYDAKKAAERIDRQYXXXXXXXXXXXXXKYKARELDREYEIGQKWKSFSL 412
           RSANDGFEQL+Y+A+KAAERIDR+Y               +ARE+DRE EIG +W++F++
Sbjct: 47  RSANDGFEQLMYEARKAAERIDRRYSVSRRVSDVAQSAAERAREIDRELEIGVRWRTFTV 106

Query: 413 DFSRNLPGYRKQLNDSLSTPLGRSFATIFFLWFALSGWLFRILFFATWVLPFAAPLLIRT 592
           DFSRN P YR+QLND L TPLGR FATIFFLWFALSGWLFRIL FATWVLPFAAPLLI T
Sbjct: 107 DFSRNWPRYRRQLNDFLDTPLGRGFATIFFLWFALSGWLFRILIFATWVLPFAAPLLIGT 166

Query: 593 IANNFVIEGACPACKKRFVGYKNQTINCTSCGSTVWQPKGDSFSRGGKATPPSSTSQSDI 772
           +ANN VI+GACPACK++FVGYK+Q I C  CG+ VWQP  DS    G+ T  SS S ++I
Sbjct: 167 VANNLVIKGACPACKRQFVGYKSQVIRCAGCGNIVWQP--DSRDGRGRGT-SSSKSDTNI 223

Query: 773 IDVEFEEK 796
           IDVEFEEK
Sbjct: 224 IDVEFEEK 231


>ref|XP_002886801.1| hypothetical protein ARALYDRAFT_315473 [Arabidopsis lyrata subsp.
           lyrata] gi|297332642|gb|EFH63060.1| hypothetical protein
           ARALYDRAFT_315473 [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score =  274 bits (700), Expect = 3e-71
 Identities = 136/248 (54%), Positives = 165/248 (66%), Gaps = 4/248 (1%)
 Frame = +2

Query: 65  TTNLPWHHPLLLQPKSQQINFTTRRHVSTQTQAFRRSDFDGFAKKVASGEVWKDAWRSAN 244
           T   P+ HP           +T+R     Q +AF+R DFD FA  V SG+ W+DAWRSAN
Sbjct: 10  TITTPYPHPA----------YTSRAASFLQVKAFQRGDFDRFADNVKSGKAWRDAWRSAN 59

Query: 245 DGFEQLVYDAKKAAERIDRQYXXXXXXXXXXXXXKYKARELDREYEIGQKWKSFSLDFSR 424
           DGFEQ V++AKK AERIDRQY               +ARE+DRE+ I  + +SFS D SR
Sbjct: 60  DGFEQFVFEAKKTAERIDRQYAVSRRFSSAASSAGDRAREIDREFGISPRVRSFSADLSR 119

Query: 425 NLPGYRKQLNDSLSTPLGRSFATIFFLWFALSGWLFRILFFATWVLPFAAPLLIRTIANN 604
           N P YRKQ +  L+TPLG SFATIFFLWFALSGWLFR++  ATWVLP A PLLI  +ANN
Sbjct: 120 NFPKYRKQFSAFLNTPLGGSFATIFFLWFALSGWLFRVIIIATWVLPIAGPLLIGAVANN 179

Query: 605 FVIEGACPACKKRFVGYKNQTINCTSCGSTVWQPKGDSFSRGGKATPPSSTS----QSDI 772
           FVI+G CPACK++F+GYK+Q I C  CG+ VWQP+GD FS+ G        S    +S I
Sbjct: 180 FVIKGECPACKRQFIGYKSQIIRCEGCGNIVWQPQGDFFSKDGNNNNSKGNSKKPPKSQI 239

Query: 773 IDVEFEEK 796
           IDV+FEEK
Sbjct: 240 IDVDFEEK 247


>ref|NP_566028.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13899075|gb|AAK48959.1|AF370532_1 Unknown protein
           [Arabidopsis thaliana] gi|18377520|gb|AAL66926.1|
           unknown protein [Arabidopsis thaliana]
           gi|20196922|gb|AAC31837.2| expressed protein
           [Arabidopsis thaliana] gi|330255384|gb|AEC10478.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 248

 Score =  267 bits (682), Expect = 4e-69
 Identities = 129/223 (57%), Positives = 157/223 (70%), Gaps = 8/223 (3%)
 Frame = +2

Query: 152 QTQAFRRSDFDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQYXXXXXXXX 331
           Q +AF+R DFD  A  V SG+ W+DAWRSANDGFEQ V++AKK AERIDRQY        
Sbjct: 26  QVKAFQRGDFDRLADNVKSGKAWRDAWRSANDGFEQFVFEAKKTAERIDRQYAVSRRFSS 85

Query: 332 XXXXXKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRSFATIFFLWF 511
                  +ARE+DRE+ I  + ++ S DFSRN P YRKQ +  L+TPLG SFATIFFLWF
Sbjct: 86  AASSAADRAREIDREFGITPRVRTVSADFSRNFPKYRKQFSAFLNTPLGGSFATIFFLWF 145

Query: 512 ALSGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQTINCTSCGS 691
           ALSGWLFR++  ATWVLP A PLLI  +ANNFVI+G CPACK++F+GYKNQ I C  CG+
Sbjct: 146 ALSGWLFRVIIIATWVLPIAGPLLIGAVANNFVIKGECPACKRQFIGYKNQIIRCEGCGN 205

Query: 692 TVWQPKGDSFSRGGKATPPSSTS--------QSDIIDVEFEEK 796
            VWQP+GD FS+ G     ++ S        +S IIDV+FEEK
Sbjct: 206 IVWQPQGDFFSKDGNNNNNNNNSKGNSKKPPKSQIIDVDFEEK 248


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