BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020397
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis ...   285   3e-75
gb|AEK71687.1| hypothetical chloroplast RF1 [Trochodendron arali...   284   5e-75
gb|ADD30924.1| putative RF1 protein [Trochodendron aralioides]        284   5e-75
ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy...   279   1e-73
ref|YP_001294231.1| hypothetical chloroplast RF1 [Buxus microphy...   279   1e-73

>ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis saniculifolia]
           gi|226933940|gb|ACO92073.1| hypothetical chloroplast RF1
           [Megaleranthis saniculifolia]
          Length = 1774

 Score =  285 bits (729), Expect = 3e-75
 Identities = 147/170 (86%), Positives = 148/170 (87%)
 Frame = -1

Query: 511 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 332
           LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF
Sbjct: 131 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 190

Query: 331 WIRQNNSIRSNKYLASELRNSMARIFSILLFITCVYYLGRIPSPIVXXXXXXXXXXXXXX 152
           WIRQNNSIRSNKYL SELRNSMARIFSILLFITCVYYLGRIPSPIV              
Sbjct: 191 WIRQNNSIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIV---------TKKLK 241

Query: 151 XXXXXTDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDEME 2
                TDVEIETT ETKGT+QEQEGSTEEDPSPSLCSEEKEDPDKIDE E
Sbjct: 242 ETSEETDVEIETTYETKGTEQEQEGSTEEDPSPSLCSEEKEDPDKIDETE 291


>gb|AEK71687.1| hypothetical chloroplast RF1 [Trochodendron aralioides]
          Length = 478

 Score =  284 bits (727), Expect = 5e-75
 Identities = 148/176 (84%), Positives = 148/176 (84%), Gaps = 6/176 (3%)
 Frame = -1

Query: 511 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 332
           LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF
Sbjct: 131 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 190

Query: 331 WIRQNNS------IRSNKYLASELRNSMARIFSILLFITCVYYLGRIPSPIVXXXXXXXX 170
           WIRQNNS      IRSNKYL SEL NSMARIFSILLFITCVYYLGRIPSPIV        
Sbjct: 191 WIRQNNSIRSNVLIRSNKYLVSELTNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 169 XXXXXXXXXXXTDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDEME 2
                      TDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDE E
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDETE 306


>gb|ADD30924.1| putative RF1 protein [Trochodendron aralioides]
          Length = 1896

 Score =  284 bits (727), Expect = 5e-75
 Identities = 148/176 (84%), Positives = 148/176 (84%), Gaps = 6/176 (3%)
 Frame = -1

Query: 511 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 332
           LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF
Sbjct: 131 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 190

Query: 331 WIRQNNS------IRSNKYLASELRNSMARIFSILLFITCVYYLGRIPSPIVXXXXXXXX 170
           WIRQNNS      IRSNKYL SEL NSMARIFSILLFITCVYYLGRIPSPIV        
Sbjct: 191 WIRQNNSIRSNVLIRSNKYLVSELTNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 169 XXXXXXXXXXXTDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDEME 2
                      TDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDE E
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDETE 306


>ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla]
           gi|182702240|sp|A6MM95.1|YCF1_BUXMI RecName:
           Full=Putative membrane protein ycf1; Short=RF1
           gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1
           [Buxus microphylla]
          Length = 1859

 Score =  279 bits (714), Expect = 1e-73
 Identities = 144/176 (81%), Positives = 147/176 (83%), Gaps = 6/176 (3%)
 Frame = -1

Query: 511 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 332
           LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF
Sbjct: 131 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 190

Query: 331 WIRQNNS------IRSNKYLASELRNSMARIFSILLFITCVYYLGRIPSPIVXXXXXXXX 170
           WIRQN+S      IRSNKYL SELRNSMARIFSILLFITCVYYLGR+P+PIV        
Sbjct: 191 WIRQNHSIKSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPAPIVTKKLKETS 250

Query: 169 XXXXXXXXXXXTDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDEME 2
                       DVEIETTSETKGTKQEQE STEEDPSPSLCSEEKEDPDKIDE E
Sbjct: 251 KTEERGESEEERDVEIETTSETKGTKQEQERSTEEDPSPSLCSEEKEDPDKIDETE 306


>ref|YP_001294231.1| hypothetical chloroplast RF1 [Buxus microphylla]
           gi|146762332|gb|ABQ45296.1| hypothetical chloroplast RF1
           [Buxus microphylla]
          Length = 399

 Score =  279 bits (714), Expect = 1e-73
 Identities = 144/176 (81%), Positives = 147/176 (83%), Gaps = 6/176 (3%)
 Frame = -1

Query: 511 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 332
           LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF
Sbjct: 131 LNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLVLF 190

Query: 331 WIRQNNS------IRSNKYLASELRNSMARIFSILLFITCVYYLGRIPSPIVXXXXXXXX 170
           WIRQN+S      IRSNKYL SELRNSMARIFSILLFITCVYYLGR+P+PIV        
Sbjct: 191 WIRQNHSIKSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPAPIVTKKLKETS 250

Query: 169 XXXXXXXXXXXTDVEIETTSETKGTKQEQEGSTEEDPSPSLCSEEKEDPDKIDEME 2
                       DVEIETTSETKGTKQEQE STEEDPSPSLCSEEKEDPDKIDE E
Sbjct: 251 KTEERGESEEERDVEIETTSETKGTKQEQERSTEEDPSPSLCSEEKEDPDKIDETE 306