BLASTX nr result

ID: Coptis23_contig00020387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020387
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529980.1| calmodulin binding protein, putative [Ricinu...    59   5e-07
emb|CAN76669.1| hypothetical protein VITISV_042862 [Vitis vinifera]    56   3e-06
ref|XP_002265121.1| PREDICTED: protein IQ-DOMAIN 14 [Vitis vinif...    56   3e-06
ref|XP_002444923.1| hypothetical protein SORBIDRAFT_07g001510 [S...    55   6e-06
ref|XP_002317060.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002529980.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223530542|gb|EEF32423.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 545

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +1

Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRREDPDQ 291
           MGKKGG+SW TAVKRAFRSPTK   D ++ +SRRRED DQ
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPTK---DADKRSSRRREDHDQ 37


>emb|CAN76669.1| hypothetical protein VITISV_042862 [Vitis vinifera]
          Length = 537

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = +1

Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRRED 282
           MGKKGG+SW TAVKRAFRSP KDN  K   +SRRRED
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPXKDNEKK---SSRRRED 34


>ref|XP_002265121.1| PREDICTED: protein IQ-DOMAIN 14 [Vitis vinifera]
           gi|296089000|emb|CBI38703.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +1

Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRREDPDQ 291
           MGKKGG+SW TAVKRAFRSPTK+ TDK   + RRRE+ DQ
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPTKE-TDKR--SGRRREEHDQ 37


>ref|XP_002444923.1| hypothetical protein SORBIDRAFT_07g001510 [Sorghum bicolor]
           gi|241941273|gb|EES14418.1| hypothetical protein
           SORBIDRAFT_07g001510 [Sorghum bicolor]
          Length = 574

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/40 (67%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = +1

Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDK-NRPTSRRREDPD 288
           MGKKGG SW TAVKRAFRSP+KD++    R  SR RED D
Sbjct: 1   MGKKGGTSWLTAVKRAFRSPSKDDSSSPTRKASRLREDAD 40


>ref|XP_002317060.1| predicted protein [Populus trichocarpa] gi|222860125|gb|EEE97672.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +1

Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRREDPDQ 291
           MGKKGG SW T VKRAFRSP+K+N  K   +SRRRE+ DQ
Sbjct: 1   MGKKGGTSWLTIVKRAFRSPSKENEKK---SSRRREEHDQ 37


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