BLASTX nr result
ID: Coptis23_contig00020387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00020387 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529980.1| calmodulin binding protein, putative [Ricinu... 59 5e-07 emb|CAN76669.1| hypothetical protein VITISV_042862 [Vitis vinifera] 56 3e-06 ref|XP_002265121.1| PREDICTED: protein IQ-DOMAIN 14 [Vitis vinif... 56 3e-06 ref|XP_002444923.1| hypothetical protein SORBIDRAFT_07g001510 [S... 55 6e-06 ref|XP_002317060.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002529980.1| calmodulin binding protein, putative [Ricinus communis] gi|223530542|gb|EEF32423.1| calmodulin binding protein, putative [Ricinus communis] Length = 545 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/40 (72%), Positives = 33/40 (82%) Frame = +1 Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRREDPDQ 291 MGKKGG+SW TAVKRAFRSPTK D ++ +SRRRED DQ Sbjct: 1 MGKKGGSSWLTAVKRAFRSPTK---DADKRSSRRREDHDQ 37 >emb|CAN76669.1| hypothetical protein VITISV_042862 [Vitis vinifera] Length = 537 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/37 (75%), Positives = 30/37 (81%) Frame = +1 Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRRED 282 MGKKGG+SW TAVKRAFRSP KDN K +SRRRED Sbjct: 1 MGKKGGSSWLTAVKRAFRSPXKDNEKK---SSRRRED 34 >ref|XP_002265121.1| PREDICTED: protein IQ-DOMAIN 14 [Vitis vinifera] gi|296089000|emb|CBI38703.3| unnamed protein product [Vitis vinifera] Length = 557 Score = 55.8 bits (133), Expect = 3e-06 Identities = 29/40 (72%), Positives = 33/40 (82%) Frame = +1 Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRREDPDQ 291 MGKKGG+SW TAVKRAFRSPTK+ TDK + RRRE+ DQ Sbjct: 1 MGKKGGSSWLTAVKRAFRSPTKE-TDKR--SGRRREEHDQ 37 >ref|XP_002444923.1| hypothetical protein SORBIDRAFT_07g001510 [Sorghum bicolor] gi|241941273|gb|EES14418.1| hypothetical protein SORBIDRAFT_07g001510 [Sorghum bicolor] Length = 574 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/40 (67%), Positives = 30/40 (75%), Gaps = 1/40 (2%) Frame = +1 Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDK-NRPTSRRREDPD 288 MGKKGG SW TAVKRAFRSP+KD++ R SR RED D Sbjct: 1 MGKKGGTSWLTAVKRAFRSPSKDDSSSPTRKASRLREDAD 40 >ref|XP_002317060.1| predicted protein [Populus trichocarpa] gi|222860125|gb|EEE97672.1| predicted protein [Populus trichocarpa] Length = 552 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/40 (67%), Positives = 31/40 (77%) Frame = +1 Query: 172 MGKKGGNSWFTAVKRAFRSPTKDNTDKNRPTSRRREDPDQ 291 MGKKGG SW T VKRAFRSP+K+N K +SRRRE+ DQ Sbjct: 1 MGKKGGTSWLTIVKRAFRSPSKENEKK---SSRRREEHDQ 37