BLASTX nr result

ID: Coptis23_contig00020377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020377
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndr...    87   1e-15
ref|NP_564447.1| uncharacterized protein [Arabidopsis thaliana] ...    87   1e-15
ref|XP_002891103.1| hypothetical protein ARALYDRAFT_473598 [Arab...    87   1e-15
dbj|BAE99576.1| hypothetical protein [Arabidopsis thaliana]            87   1e-15
ref|XP_002874581.1| hypothetical protein ARALYDRAFT_327146 [Arab...    86   2e-15

>ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein,
           putative [Ricinus communis] gi|223531545|gb|EEF33375.1|
           Non-imprinted in Prader-Willi/Angelman syndrome region
           protein, putative [Ricinus communis]
          Length = 345

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/75 (62%), Positives = 49/75 (65%)
 Frame = -3

Query: 226 QSWTLAYKGMSSDNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXXYEP 47
           QSW  +YKGMSSDNIKGLVLALSSSFFIGASFIV                       YEP
Sbjct: 4   QSWRDSYKGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGLRAGSGGYSYLYEP 63

Query: 46  LWWAGMITMVVGEIA 2
           LWW GMITM+VGEIA
Sbjct: 64  LWWVGMITMIVGEIA 78


>ref|NP_564447.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8778257|gb|AAF79266.1|AC023279_15 F12K21.21
           [Arabidopsis thaliana]
           gi|12323864|gb|AAG51905.1|AC023913_13 hypothetical
           protein; 4619-2435 [Arabidopsis thaliana]
           gi|89000981|gb|ABD59080.1| At1g34470 [Arabidopsis
           thaliana] gi|332193596|gb|AEE31717.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 368

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/80 (58%), Positives = 49/80 (61%)
 Frame = -3

Query: 241 MAETAQSWTLAYKGMSSDNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXX 62
           MA  + SW  AYKGMSSDNIKGLVLALSSS FIGASFIV                     
Sbjct: 1   MASLSGSWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYS 60

Query: 61  XXYEPLWWAGMITMVVGEIA 2
              EPLWW GMITM+VGEIA
Sbjct: 61  YLLEPLWWVGMITMIVGEIA 80


>ref|XP_002891103.1| hypothetical protein ARALYDRAFT_473598 [Arabidopsis lyrata subsp.
           lyrata] gi|297336945|gb|EFH67362.1| hypothetical protein
           ARALYDRAFT_473598 [Arabidopsis lyrata subsp. lyrata]
          Length = 368

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/80 (58%), Positives = 49/80 (61%)
 Frame = -3

Query: 241 MAETAQSWTLAYKGMSSDNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXX 62
           MA  + SW  AYKGMSSDNIKGLVLALSSS FIGASFIV                     
Sbjct: 1   MASLSGSWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYS 60

Query: 61  XXYEPLWWAGMITMVVGEIA 2
              EPLWW GMITM+VGEIA
Sbjct: 61  YLLEPLWWVGMITMIVGEIA 80


>dbj|BAE99576.1| hypothetical protein [Arabidopsis thaliana]
          Length = 106

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/80 (58%), Positives = 49/80 (61%)
 Frame = -3

Query: 241 MAETAQSWTLAYKGMSSDNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXX 62
           MA  + SW  AYKGMSSDNIKGLVLALSSS FIGASFIV                     
Sbjct: 1   MASLSGSWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYS 60

Query: 61  XXYEPLWWAGMITMVVGEIA 2
              EPLWW GMITM+VGEIA
Sbjct: 61  YLLEPLWWVGMITMIVGEIA 80


>ref|XP_002874581.1| hypothetical protein ARALYDRAFT_327146 [Arabidopsis lyrata subsp.
           lyrata] gi|297320418|gb|EFH50840.1| hypothetical protein
           ARALYDRAFT_327146 [Arabidopsis lyrata subsp. lyrata]
          Length = 381

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/80 (56%), Positives = 50/80 (62%)
 Frame = -3

Query: 241 MAETAQSWTLAYKGMSSDNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXX 62
           M +++ SW  AYKGMSSDN+KGLVLALSSS FIGASFIV                     
Sbjct: 1   MVDSSGSWRDAYKGMSSDNVKGLVLALSSSLFIGASFIVKKKGLKKAGASGLRAGSGGYS 60

Query: 61  XXYEPLWWAGMITMVVGEIA 2
              EPLWW GMITM+VGEIA
Sbjct: 61  YLLEPLWWIGMITMIVGEIA 80


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