BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020372
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]    67   2e-09
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    63   3e-08
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = -1

Query: 564 LFTEFYLMTHSMDLALKFMGLGTPYLRKSEREMY--QKMVHEFLKYFEEERNVCGAKELC 391
           LF +FYL  H +DLA+K++ +G         + +  ++ +  FL+YFEE ++V  A++ C
Sbjct: 383 LFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFC 442

Query: 390 NILKQVDFLDLEVYAFLLCNNIPFERKERQAPQIMRGNGVEIISESE 250
             ++++  LD ++Y  LL   I   ++E    + M+ +G+EI SE+E
Sbjct: 443 ETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETE 489


>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = -1

Query: 564 LFTEFYLMTHSMDLALKFMGLGTPYLRKSEREMY--QKMVHEFLKYFEEERNVCGAKELC 391
           LF +FYL  H +DLA+K++ +G         + +  ++ +  FL+YFEE ++V  A++ C
Sbjct: 379 LFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFC 438

Query: 390 NILKQVDFLDLEVYAFLLCNNIPFERKERQAPQIMRGNGVEIISESE 250
             ++++  LD ++Y  LL   I   ++E    + M+ +G+EI SE+E
Sbjct: 439 ETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETE 485


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/105 (36%), Positives = 56/105 (53%)
 Frame = -1

Query: 564 LFTEFYLMTHSMDLALKFMGLGTPYLRKSEREMYQKMVHEFLKYFEEERNVCGAKELCNI 385
           +F  F+L  H +DLALK M      +++ E +   K V  F  YFE+E++V GA+ LC I
Sbjct: 361 MFMVFFLKNHQLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKI 420

Query: 384 LKQVDFLDLEVYAFLLCNNIPFERKERQAPQIMRGNGVEIISESE 250
           LK ++ LD   Y  LL   I   +   +  Q +  +G+EI  E E
Sbjct: 421 LKHINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELE 465


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 34/103 (33%), Positives = 56/103 (54%)
 Frame = -1

Query: 564 LFTEFYLMTHSMDLALKFMGLGTPYLRKSEREMYQKMVHEFLKYFEEERNVCGAKELCNI 385
           +F   +L    +D ALK+M      ++ +E +   + V  FLKYFEEE++V GA++ C I
Sbjct: 395 MFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKI 454

Query: 384 LKQVDFLDLEVYAFLLCNNIPFERKERQAPQIMRGNGVEIISE 256
           LK +  LD   Y  LL   +   R E +  + M+ + +E+ S+
Sbjct: 455 LKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEVDSK 497


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/112 (34%), Positives = 55/112 (49%)
 Frame = -1

Query: 564 LFTEFYLMTHSMDLALKFMGLGTPYLRKSEREMYQKMVHEFLKYFEEERNVCGAKELCNI 385
           +F  F+L  H  DLALK M       ++ E +  QK V  FL YFE+ ++V GA+ LC I
Sbjct: 363 MFMVFFLKNHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAERLCKI 422

Query: 384 LKQVDFLDLEVYAFLLCNNIPFERKERQAPQIMRGNGVEIISESETT*ARPS 229
            KQ++ L+   Y  LL       R   +  Q +  + +EI  E E    R S
Sbjct: 423 WKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERVS 474