BLASTX nr result

ID: Coptis23_contig00020362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020362
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26181.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002280269.1| PREDICTED: UPF0613 protein PB24D3.06c [Vitis...   149   2e-34
ref|XP_002311828.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002517152.1| catalytic, putative [Ricinus communis] gi|22...   145   3e-33
ref|XP_004169893.1| PREDICTED: UPF0613 protein PB24D3.06c-like [...   144   1e-32

>emb|CBI26181.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/109 (69%), Positives = 85/109 (77%)
 Frame = +1

Query: 58  DVSSGGGSVNPKKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPL 237
           D S  GG VN +KNQF G+LFKYGPK +QVAFKTG++KQQVIF+GGLTDG LATEYLEPL
Sbjct: 9   DPSGSGGPVN-RKNQFHGVLFKYGPKPVQVAFKTGNYKQQVIFIGGLTDGLLATEYLEPL 67

Query: 238 SVALEKEKWSLVQFXXXXXXXXXXXXXXKQDAMELDQLISYLINKEDSE 384
           ++ALE EKWSLVQ               KQDA+ELDQLISYLINKEDSE
Sbjct: 68  AMALENEKWSLVQLLLSSSYSGYGISSLKQDAVELDQLISYLINKEDSE 116


>ref|XP_002280269.1| PREDICTED: UPF0613 protein PB24D3.06c [Vitis vinifera]
          Length = 347

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/109 (69%), Positives = 85/109 (77%)
 Frame = +1

Query: 58  DVSSGGGSVNPKKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPL 237
           D S  GG VN +KNQF G+LFKYGPK +QVAFKTG++KQQVIF+GGLTDG LATEYLEPL
Sbjct: 51  DPSGSGGPVN-RKNQFHGVLFKYGPKPVQVAFKTGNYKQQVIFIGGLTDGLLATEYLEPL 109

Query: 238 SVALEKEKWSLVQFXXXXXXXXXXXXXXKQDAMELDQLISYLINKEDSE 384
           ++ALE EKWSLVQ               KQDA+ELDQLISYLINKEDSE
Sbjct: 110 AMALENEKWSLVQLLLSSSYSGYGISSLKQDAVELDQLISYLINKEDSE 158


>ref|XP_002311828.1| predicted protein [Populus trichocarpa] gi|222851648|gb|EEE89195.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/97 (75%), Positives = 80/97 (82%)
 Frame = +1

Query: 94  KNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPLSVALEKEKWSLV 273
           KNQFRG+LFKYGPK IQVAFKTGD+KQQVIF+GGLTDGFLATEYLEPL++AL+KEKWSLV
Sbjct: 1   KNQFRGVLFKYGPKPIQVAFKTGDYKQQVIFIGGLTDGFLATEYLEPLAIALDKEKWSLV 60

Query: 274 QFXXXXXXXXXXXXXXKQDAMELDQLISYLINKEDSE 384
           Q               KQDA ELDQL+SYLINKEDSE
Sbjct: 61  QLLMSSSYTGYGTTSLKQDASELDQLVSYLINKEDSE 97


>ref|XP_002517152.1| catalytic, putative [Ricinus communis] gi|223543787|gb|EEF45315.1|
           catalytic, putative [Ricinus communis]
          Length = 351

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/109 (66%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
 Frame = +1

Query: 64  SSGGGSVNP--KKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATEYLEPL 237
           SS   ++ P   KNQFRG+LFKYGPK+IQVAFKTG+ KQQV+F+GGLTDGFLATEYLEPL
Sbjct: 54  SSSSDNLGPIKAKNQFRGVLFKYGPKAIQVAFKTGEHKQQVVFIGGLTDGFLATEYLEPL 113

Query: 238 SVALEKEKWSLVQFXXXXXXXXXXXXXXKQDAMELDQLISYLINKEDSE 384
           ++AL+KEKWSLVQ               +QDAME+DQLISYLINKE+SE
Sbjct: 114 AIALDKEKWSLVQLLMSSSYSGYGTSSLQQDAMEIDQLISYLINKENSE 162


>ref|XP_004169893.1| PREDICTED: UPF0613 protein PB24D3.06c-like [Cucumis sativus]
          Length = 361

 Score =  144 bits (362), Expect = 1e-32
 Identities = 76/114 (66%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
 Frame = +1

Query: 58  DVSSG---GGSVNP--KKNQFRGLLFKYGPKSIQVAFKTGDFKQQVIFLGGLTDGFLATE 222
           + SSG   G S  P  KKN FRG LFKYGPK IQVAFKTGD+KQQVIF+GGLTDGF+ATE
Sbjct: 59  NTSSGSPVGDSPGPVVKKNHFRGFLFKYGPKPIQVAFKTGDYKQQVIFIGGLTDGFMATE 118

Query: 223 YLEPLSVALEKEKWSLVQFXXXXXXXXXXXXXXKQDAMELDQLISYLINKEDSE 384
           YLE L++AL+KEKWSLVQ               +QDA ELDQL+SYLINKEDSE
Sbjct: 119 YLESLAIALDKEKWSLVQILLSSSYSGYGTSSLQQDAKELDQLVSYLINKEDSE 172


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