BLASTX nr result

ID: Coptis23_contig00020344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020344
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139323.1| PREDICTED: nudix hydrolase 19, chloroplastic...    83   3e-14
ref|XP_002285069.1| PREDICTED: nudix hydrolase 19, chloroplastic...    82   6e-14
ref|XP_002308309.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002330502.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002524460.1| mutt/nudix hydrolase, putative [Ricinus comm...    71   1e-10

>ref|XP_004139323.1| PREDICTED: nudix hydrolase 19, chloroplastic-like [Cucumis sativus]
           gi|449520651|ref|XP_004167347.1| PREDICTED: nudix
           hydrolase 19, chloroplastic-like [Cucumis sativus]
          Length = 441

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/78 (61%), Positives = 58/78 (74%)
 Frame = +2

Query: 11  SFSSKTQVKFSAMSIINSELHAFAGNPLKVKSSKPSNDLFSPISALESLKNQLLNNTQQP 190
           S SS T +   ++S+ NS  HAFAGNP+K+K+ KP N  FS  SALESL +QLLNNT   
Sbjct: 30  SISSSTSIPTMSISL-NS--HAFAGNPIKLKTPKPENP-FSASSALESLNSQLLNNTHFS 85

Query: 191 SSPSFKVLPFKKGRPLAT 244
           SS +FKVLPFKKG+PLAT
Sbjct: 86  SSINFKVLPFKKGKPLAT 103


>ref|XP_002285069.1| PREDICTED: nudix hydrolase 19, chloroplastic-like [Vitis vinifera]
          Length = 441

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +2

Query: 11  SFSSKTQVKFSAMSIINSELHAFAGNPLKVKSSKPSNDLFSPISALESLKNQLLNNTQQP 190
           + ++KT     +    N + HAFAGNPL+  + KP + LFSPISA E+LK++LL N   P
Sbjct: 24  TLTTKTLSHLHSTMSTNLKTHAFAGNPLRSTTPKPES-LFSPISAFETLKSRLLENALLP 82

Query: 191 SSPSFKVLPFKKGRPLATS 247
           SSP FKVLPF+KGRPLA S
Sbjct: 83  SSPIFKVLPFRKGRPLAIS 101


>ref|XP_002308309.1| predicted protein [Populus trichocarpa] gi|222854285|gb|EEE91832.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/64 (59%), Positives = 52/64 (81%)
 Frame = +2

Query: 56  INSELHAFAGNPLKVKSSKPSNDLFSPISALESLKNQLLNNTQQPSSPSFKVLPFKKGRP 235
           I+ + HAFAGNPL+ K+ +P++ L SP  ALE+LK QL++N+ Q SS +FKVLPF+KGRP
Sbjct: 3   ISLQSHAFAGNPLRSKTPQPTHPL-SPALALETLKTQLVDNSHQSSSLNFKVLPFRKGRP 61

Query: 236 LATS 247
           LA+S
Sbjct: 62  LASS 65


>ref|XP_002330502.1| predicted protein [Populus trichocarpa] gi|222872436|gb|EEF09567.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/64 (62%), Positives = 48/64 (75%)
 Frame = +2

Query: 59  NSELHAFAGNPLKVKSSKPSNDLFSPISALESLKNQLLNNTQQPSSPSFKVLPFKKGRPL 238
           N + HAFAGNPL+ K+ K S D  SP  A E+LK QLL NT Q SS +FKVLPF+KGRPL
Sbjct: 4   NLQSHAFAGNPLRSKTPK-STDPLSPPLAFETLKTQLLGNTHQLSSLNFKVLPFRKGRPL 62

Query: 239 ATSA 250
           A+S+
Sbjct: 63  ASSS 66


>ref|XP_002524460.1| mutt/nudix hydrolase, putative [Ricinus communis]
           gi|223536248|gb|EEF37900.1| mutt/nudix hydrolase,
           putative [Ricinus communis]
          Length = 400

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = +2

Query: 56  INSELHAFAGNPLKVKSSKPSNDLFSPISALESLKNQLLN-NTQQPSSPSFKVLPFKKGR 232
           IN   HAFAGNPL  K+ KP++ L SP  ALE+LK+Q L+ N+ Q SS +FKVLPF+KGR
Sbjct: 3   INLRTHAFAGNPLLSKTLKPTDPL-SPNLALETLKSQFLDGNSHQLSSVNFKVLPFRKGR 61

Query: 233 PLATSA 250
           PLA+S+
Sbjct: 62  PLASSS 67


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