BLASTX nr result

ID: Coptis23_contig00020338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020338
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19119.3| unnamed protein product [Vitis vinifera]              204   6e-51
emb|CBI21453.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|NP_001234609.1| prephenate aminotransferase [Solanum lycoper...   194   5e-48
ref|XP_002277000.1| PREDICTED: bifunctional aspartate aminotrans...   192   2e-47
ref|XP_002284240.2| PREDICTED: uncharacterized protein LOC100242...   192   2e-47

>emb|CBI19119.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  204 bits (519), Expect = 6e-51
 Identities = 111/178 (62%), Positives = 130/178 (73%), Gaps = 5/178 (2%)
 Frame = -1

Query: 519 QGSCISNLSLKYPL---QDSEFFRLPSFFPQSKNLLFK--KKCLRENSIKMSAVNGANDT 355
           QGSC S     + L    D +  R  SF  Q  NL FK  +K      ++M  +  A   
Sbjct: 6   QGSCSSTRPAIHSLGVSSDGDTSRSISFSSQLNNLCFKSLEKRFHVKRLRMGTLVRAESI 65

Query: 354 PDVITVDTTLSLRVNSVKPSRTVAITDQATALFQAGVPVILLAAGEPDFDTPSVIAEAGI 175
              + VD +LS RVNSVKPS+T+A+TD ATAL QAGVPVI LAAGEPDFDTP+V+AEAGI
Sbjct: 66  SKQVEVDISLSPRVNSVKPSKTIAVTDLATALVQAGVPVIRLAAGEPDFDTPTVVAEAGI 125

Query: 174 NAIREGHTRYTPNSGTFELRKAICHKLEEENGISYTPDQILVSNGAKQSVLQGLLAVC 1
           NAIREG+TRYTPN+GT ELR AICHKL+EENG++YTPDQILVSNGAKQSVLQ +LAVC
Sbjct: 126 NAIREGYTRYTPNAGTLELRTAICHKLKEENGLTYTPDQILVSNGAKQSVLQAVLAVC 183


>emb|CBI21453.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  202 bits (513), Expect = 3e-50
 Identities = 105/157 (66%), Positives = 125/157 (79%)
 Frame = -1

Query: 471 SEFFRLPSFFPQSKNLLFKKKCLRENSIKMSAVNGANDTPDVITVDTTLSLRVNSVKPSR 292
           SE FR  SF  +  +L   +   +  S ++  +  A  T + + VD +LS RVNSVKPS+
Sbjct: 25  SECFRSVSFPSRFHSLKSLESTRQVQSSRLDVIVRAGGTSEKMEVDISLSPRVNSVKPSK 84

Query: 291 TVAITDQATALFQAGVPVILLAAGEPDFDTPSVIAEAGINAIREGHTRYTPNSGTFELRK 112
           TVAITDQATAL QAGVPVI LAAGEPDFDTP+VIAEAGINAIREG+TRYTPN+GT E+R 
Sbjct: 85  TVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGYTRYTPNAGTLEVRS 144

Query: 111 AICHKLEEENGISYTPDQILVSNGAKQSVLQGLLAVC 1
           AICHKL+EENG+SYTPD+ILVSNGAKQS+LQ +LAVC
Sbjct: 145 AICHKLKEENGLSYTPDEILVSNGAKQSILQAVLAVC 181


>ref|NP_001234609.1| prephenate aminotransferase [Solanum lycopersicum]
           gi|311700557|gb|ADQ00383.1| prephenate aminotransferase
           [Solanum lycopersicum]
          Length = 480

 Score =  194 bits (494), Expect = 5e-48
 Identities = 96/117 (82%), Positives = 107/117 (91%)
 Frame = -1

Query: 351 DVITVDTTLSLRVNSVKPSRTVAITDQATALFQAGVPVILLAAGEPDFDTPSVIAEAGIN 172
           D + VD +LS RVNSVKPS+TVAITDQATAL QAGVPVI LAAGEPDFDTP+ IAEAGIN
Sbjct: 69  DRVEVDLSLSPRVNSVKPSKTVAITDQATALVQAGVPVIRLAAGEPDFDTPAPIAEAGIN 128

Query: 171 AIREGHTRYTPNSGTFELRKAICHKLEEENGISYTPDQILVSNGAKQSVLQGLLAVC 1
           AIREGHTRYTPN+GT ELR AICHKL+EENG+SYTPDQI+VSNGAKQS++Q +LAVC
Sbjct: 129 AIREGHTRYTPNAGTMELRSAICHKLKEENGLSYTPDQIVVSNGAKQSIVQAVLAVC 185


>ref|XP_002277000.1| PREDICTED: bifunctional aspartate aminotransferase and
           glutamate/aspartate-prephenate aminotransferase [Vitis
           vinifera]
          Length = 410

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/113 (84%), Positives = 106/113 (93%)
 Frame = -1

Query: 339 VDTTLSLRVNSVKPSRTVAITDQATALFQAGVPVILLAAGEPDFDTPSVIAEAGINAIRE 160
           VD +LS RVNSVKPS+TVAITDQATAL QAGVPVI LAAGEPDFDTP+VIAEAGINAIRE
Sbjct: 3   VDISLSPRVNSVKPSKTVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGINAIRE 62

Query: 159 GHTRYTPNSGTFELRKAICHKLEEENGISYTPDQILVSNGAKQSVLQGLLAVC 1
           G+TRYTPN+GT E+R AICHKL+EENG+SYTPD+ILVSNGAKQS+LQ +LAVC
Sbjct: 63  GYTRYTPNAGTLEVRSAICHKLKEENGLSYTPDEILVSNGAKQSILQAVLAVC 115


>ref|XP_002284240.2| PREDICTED: uncharacterized protein LOC100242012 [Vitis vinifera]
          Length = 1249

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/130 (73%), Positives = 111/130 (85%)
 Frame = -1

Query: 390  IKMSAVNGANDTPDVITVDTTLSLRVNSVKPSRTVAITDQATALFQAGVPVILLAAGEPD 211
            ++M  +  A      + VD +LS RVNSVKPS+T+A+TD ATAL QAGVPVI LAAGEPD
Sbjct: 825  LRMGTLVRAESISKQVEVDISLSPRVNSVKPSKTIAVTDLATALVQAGVPVIRLAAGEPD 884

Query: 210  FDTPSVIAEAGINAIREGHTRYTPNSGTFELRKAICHKLEEENGISYTPDQILVSNGAKQ 31
            FDTP+V+AEAGINAIREG+TRYTPN+GT ELR AICHKL+EENG++YTPDQILVSNGAKQ
Sbjct: 885  FDTPTVVAEAGINAIREGYTRYTPNAGTLELRTAICHKLKEENGLTYTPDQILVSNGAKQ 944

Query: 30   SVLQGLLAVC 1
            SVLQ +LAVC
Sbjct: 945  SVLQAVLAVC 954


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