BLASTX nr result

ID: Coptis23_contig00020335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020335
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36694.1| GATA domain class transcription factor [Malus x d...    92   4e-17
emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]    88   6e-16
emb|CBI17417.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Viti...    88   8e-16
gb|ABB45844.1| hypothetical protein [Eutrema halophilum]               84   2e-14

>gb|ADL36694.1| GATA domain class transcription factor [Malus x domestica]
          Length = 331

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/91 (59%), Positives = 61/91 (67%)
 Frame = +3

Query: 3   SELSVPADDVANLEWLSHFVEDSFSEFSLQHIVGKTELNPQTKNDKGSEMFIEAPGLGPV 182
           SELSVPADD+ NLEWLSHFVEDSFSEF+     G     P  K++K  +  +E P     
Sbjct: 103 SELSVPADDLENLEWLSHFVEDSFSEFTTALPAGFLPEKP--KSEKRPD--LETPFPEKP 158

Query: 183 GVATSVPAKARSKRSRTGGRVWSLGSLPLTD 275
              T VPAKARSKR RTGGRVWSLGS  LT+
Sbjct: 159 CFKTPVPAKARSKRRRTGGRVWSLGSPSLTE 189


>emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]
          Length = 338

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +3

Query: 3   SELSVPADDVANLEWLSHFVEDSFSEFSLQHIVGKTELNPQTKNDKGSEMFIEAPGLGPV 182
           +EL+VPADD+A+LEWLSHFVEDSFSE+S     G      Q + +   E   E P     
Sbjct: 109 TELTVPADDLADLEWLSHFVEDSFSEYSAPFPPGTLTEKAQNQTENPPEP--ETPLQIKS 166

Query: 183 GVATSVPAKARSKRSRTGGRVWSLGSLPLTD 275
            + T  PAKARSKR+RTGGRVWS+GS  LT+
Sbjct: 167 CLKTPFPAKARSKRARTGGRVWSMGSPSLTE 197


>emb|CBI17417.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +3

Query: 3   SELSVPADDVANLEWLSHFVEDSFSEFSLQHIVGKTELNPQTKNDKGSEMFIEAPGLGPV 182
           +EL+VPADD+A+LEWLSHFVEDSFSE+S     G      Q + +   E   E P     
Sbjct: 109 TELTVPADDLADLEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEP--ETPLQIKS 166

Query: 183 GVATSVPAKARSKRSRTGGRVWSLGSLPLTD 275
            + T  PAKARSKR+RTGGRVWS+GS  LT+
Sbjct: 167 CLKTPFPAKARSKRARTGGRVWSMGSPSLTE 197


>ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera]
          Length = 338

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +3

Query: 3   SELSVPADDVANLEWLSHFVEDSFSEFSLQHIVGKTELNPQTKNDKGSEMFIEAPGLGPV 182
           +EL+VPADD+A+LEWLSHFVEDSFSE+S     G      Q + +   E   E P     
Sbjct: 109 TELTVPADDLADLEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEP--ETPLQIKS 166

Query: 183 GVATSVPAKARSKRSRTGGRVWSLGSLPLTD 275
            + T  PAKARSKR+RTGGRVWS+GS  LT+
Sbjct: 167 CLKTPFPAKARSKRARTGGRVWSMGSPSLTE 197


>gb|ABB45844.1| hypothetical protein [Eutrema halophilum]
          Length = 332

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/86 (51%), Positives = 56/86 (65%)
 Frame = +3

Query: 3   SELSVPADDVANLEWLSHFVEDSFSEFSLQHIVGKTELNPQTKNDKGSEMFIEAPGLGPV 182
           SELSVPAD++ANLEWLSHFV+DSF E+S  ++ G +        D+   +    P     
Sbjct: 97  SELSVPADELANLEWLSHFVDDSFMEYSAPNLTGTSTKPAWLTGDRKHPV---TPATEES 153

Query: 183 GVATSVPAKARSKRSRTGGRVWSLGS 260
              + VPAKARSKR+R GG+VWSLGS
Sbjct: 154 CFNSPVPAKARSKRNRNGGKVWSLGS 179


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