BLASTX nr result

ID: Coptis23_contig00020326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020326
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264843.1| PREDICTED: uncharacterized protein LOC100258...   253   2e-65
emb|CBI31143.3| unnamed protein product [Vitis vinifera]              247   2e-63
emb|CAQ58623.1| unknown gene [Vitis vinifera]                         242   6e-62
ref|XP_002323105.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|NP_001060654.1| Os07g0681500 [Oryza sativa Japonica Group] g...   168   1e-39

>ref|XP_002264843.1| PREDICTED: uncharacterized protein LOC100258764 [Vitis vinifera]
          Length = 1330

 Score =  253 bits (647), Expect = 2e-65
 Identities = 128/245 (52%), Positives = 176/245 (71%), Gaps = 1/245 (0%)
 Frame = -3

Query: 734 MSTESTRFENRVLETVKRCQERKDSPLIWGMEVCKCLREAELKTPSVELGEVLVSNLCFK 555
           M++ +T FE RV E +KRCQER++ PLIW  E+ KCL  A L  PSVELG+VLVS LCF 
Sbjct: 1   MASNATLFEERVKEALKRCQERREPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFA 60

Query: 554 NNNPYLWKFIEQAISSGILSSFHVLALLSSRVIPHRRTQPEAYRLYLELVVRYTFSSTRM 375
           +N P +WKF++ A+SS +LS  HVL+LL+SR+IPHR +QPEAYRLYLEL+ RY FS   +
Sbjct: 61  HNCPSMWKFLDHALSSRLLSPLHVLSLLTSRIIPHRWSQPEAYRLYLELLSRYAFSFHPV 120

Query: 374 D-NVCKKKIAKSVDDTLQLSQTYEIPIVEFGHALALYFFSMIIGLIDCTLKDWGLQHSST 198
           + +  K++I KSVD  LQLS+TY++ ++E GH + L+FFS+++GL+D TL DWGL  +  
Sbjct: 121 EPDASKERIIKSVDAALQLSKTYQVHVLELGHTMVLFFFSIVVGLLDSTLDDWGLPVTFL 180

Query: 197 DKLSGVFGDGGCQIMDVESKLDHQDMRTDLHDRLHRMNSTRTVEVLGELTENRKAVVLLH 18
           D+ SGV   G    MD++SK +    +++  +++ R NS   +EVLG L ENRKA VLL 
Sbjct: 181 DRASGVARSGDYLNMDIDSKGNKNFKQSEHREQMRRTNSFLAMEVLGTLMENRKAKVLLR 240

Query: 17  LMLLN 3
           L+ LN
Sbjct: 241 LVHLN 245


>emb|CBI31143.3| unnamed protein product [Vitis vinifera]
          Length = 1342

 Score =  247 bits (630), Expect = 2e-63
 Identities = 125/240 (52%), Positives = 170/240 (70%), Gaps = 1/240 (0%)
 Frame = -3

Query: 719 TRFENRVLETVKRCQERKDSPLIWGMEVCKCLREAELKTPSVELGEVLVSNLCFKNNNPY 540
           T F  RV+E +K CQER++ PLIW  EV +C+  A L  PSVELG+VLVS LCF  N+P 
Sbjct: 17  TLFNQRVVEALKSCQERREPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPS 76

Query: 539 LWKFIEQAISSGILSSFHVLALLSSRVIPHRRTQPEAYRLYLELVVRYTFSSTRMD-NVC 363
            WKF++ AIS G+LS FHVL+ L+SR+IPHR +QPEAYRLYLEL+ RY FS   ++ +  
Sbjct: 77  RWKFLDHAISCGLLSHFHVLSQLTSRIIPHRWSQPEAYRLYLELLSRYAFSFHPVEPDAS 136

Query: 362 KKKIAKSVDDTLQLSQTYEIPIVEFGHALALYFFSMIIGLIDCTLKDWGLQHSSTDKLSG 183
           K++I KSVD  LQLS+TY++ ++E GH + L+FFS+++GL+D TL DWGL  +  D+ SG
Sbjct: 137 KERIIKSVDAALQLSKTYQVHVLELGHTMVLFFFSIVVGLLDSTLDDWGLPVTFLDRASG 196

Query: 182 VFGDGGCQIMDVESKLDHQDMRTDLHDRLHRMNSTRTVEVLGELTENRKAVVLLHLMLLN 3
           V   G    MD++SK +    +++  +++ R NS   +EVLG L ENRKA VLL L+ LN
Sbjct: 197 VARSGDYLNMDIDSKGNKNFKQSEHREQMRRTNSFLAMEVLGTLMENRKAKVLLRLVHLN 256


>emb|CAQ58623.1| unknown gene [Vitis vinifera]
          Length = 1472

 Score =  242 bits (618), Expect = 6e-62
 Identities = 122/235 (51%), Positives = 168/235 (71%), Gaps = 1/235 (0%)
 Frame = -3

Query: 704 RVLETVKRCQERKDSPLIWGMEVCKCLREAELKTPSVELGEVLVSNLCFKNNNPYLWKFI 525
           R++E +K CQER++ PLIW  EV +C+  A L  PSVELG+VLVS LCF  N+P  WKF+
Sbjct: 104 RMVEALKSCQERREPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPSRWKFL 163

Query: 524 EQAISSGILSSFHVLALLSSRVIPHRRTQPEAYRLYLELVVRYTFSSTRMD-NVCKKKIA 348
           + AIS G+LS FHVL+ L+SR+IPHR +QPEAYRLYLEL+ RY FS   ++ +  K++I 
Sbjct: 164 DHAISCGLLSHFHVLSQLTSRIIPHRWSQPEAYRLYLELLSRYAFSFHPVEPDASKERII 223

Query: 347 KSVDDTLQLSQTYEIPIVEFGHALALYFFSMIIGLIDCTLKDWGLQHSSTDKLSGVFGDG 168
           KSVD  LQLS+TY++ ++E GH + L+FFS+++GL+D TL DWGL  +  D+ SGV   G
Sbjct: 224 KSVDAALQLSKTYQVHVLELGHTMVLFFFSIVVGLLDSTLDDWGLPVTFLDRASGVARSG 283

Query: 167 GCQIMDVESKLDHQDMRTDLHDRLHRMNSTRTVEVLGELTENRKAVVLLHLMLLN 3
               MD++SK +    +++  +++ R NS   +EVLG L ENRKA VLL L+ LN
Sbjct: 284 DYLNMDIDSKGNKNFKQSEHREQMRRTNSFLAMEVLGTLMENRKAKVLLRLVHLN 338



 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 35/59 (59%), Positives = 45/59 (76%)
 Frame = -3

Query: 632 KCLREAELKTPSVELGEVLVSNLCFKNNNPYLWKFIEQAISSGILSSFHVLALLSSRVI 456
           KCL  A L  PSVELG+VLVS LCF +N P +WKF++ A+SS +LS  HVL+LL+SR +
Sbjct: 3   KCLDSAGLGLPSVELGQVLVSQLCFAHNCPSMWKFLDHALSSCLLSPLHVLSLLTSRFL 61


>ref|XP_002323105.1| predicted protein [Populus trichocarpa] gi|222867735|gb|EEF04866.1|
           predicted protein [Populus trichocarpa]
          Length = 1331

 Score =  238 bits (606), Expect = 1e-60
 Identities = 126/250 (50%), Positives = 170/250 (68%), Gaps = 7/250 (2%)
 Frame = -3

Query: 731 STESTRFENRVLETVKRC------QERKDSPLIWGMEVCKCLREAELKTPSVELGEVLVS 570
           S ES R +  +LE VK C      Q R++SPL+W MEV KCL+  +++ PS +L E+LVS
Sbjct: 15  SEESERRKLILLEKVKECLSQRQDQRREESPLVWAMEVVKCLKSLKMEMPSPDLAEILVS 74

Query: 569 NLCFKNNNPYLWKFIEQAISSGILSSFHVLALLSSRVIPHRRTQPEAYRLYLELVVRYTF 390
           +LCF NNN   WKF++QA+SS +LS  HVL+LLSSRVIP+RR+QPEAYRL+LEL  RY F
Sbjct: 75  HLCFDNNNASTWKFLQQALSSRLLSPLHVLSLLSSRVIPNRRSQPEAYRLFLELFSRYAF 134

Query: 389 S-STRMDNVCKKKIAKSVDDTLQLSQTYEIPIVEFGHALALYFFSMIIGLIDCTLKDWGL 213
           S  T +D+ C+ KI  SVD  LQLS+TYE+ + E G  L L+FF++ +GLID T  D GL
Sbjct: 135 SLDTAVDDACRDKIINSVDAALQLSRTYEVRLSELGQLLVLFFFTVFVGLIDSTFDDMGL 194

Query: 212 QHSSTDKLSGVFGDGGCQIMDVESKLDHQDMRTDLHDRLHRMNSTRTVEVLGELTENRKA 33
           Q  S+D   G  G    Q MD++S+ D+   R +  + L + N+  ++EVL +L E+RKA
Sbjct: 195 QIKSSDIQEGPLGTDNFQDMDMDSRGDYSVERNEHRELLRKKNTIMSMEVLAKLMESRKA 254

Query: 32  VVLLHLMLLN 3
           VVLL L+  N
Sbjct: 255 VVLLRLVHFN 264


>ref|NP_001060654.1| Os07g0681500 [Oryza sativa Japonica Group]
           gi|33146668|dbj|BAC80014.1| unknown protein [Oryza
           sativa Japonica Group] gi|113612190|dbj|BAF22568.1|
           Os07g0681500 [Oryza sativa Japonica Group]
          Length = 1315

 Score =  168 bits (425), Expect = 1e-39
 Identities = 92/238 (38%), Positives = 136/238 (57%), Gaps = 2/238 (0%)
 Frame = -3

Query: 710 ENRVLETVKRCQERKDSPLIWGMEVCKCLREAELKTPSVELGEVLVSNLCFKNNNPYLWK 531
           E RV+  +K  + R D PL+W +EV + +       PS +L  +LVSNLCF +N+P LWK
Sbjct: 12  ERRVMAALKASEARGDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSLWK 71

Query: 530 FIEQAISSGILSSFHVLALLSSRVIPHRRTQPEAYRLYLELVVRYTFSS--TRMDNVCKK 357
            +  A++S +L   HVLALL+ RV+P RR QPEAYRLYLEL+     SS  +      + 
Sbjct: 72  LVGHAVASRLLCPLHVLALLTPRVLPQRRAQPEAYRLYLELLRSNVTSSFLSMEAGPNRD 131

Query: 356 KIAKSVDDTLQLSQTYEIPIVEFGHALALYFFSMIIGLIDCTLKDWGLQHSSTDKLSGVF 177
           KI KS+DD LQLS+ Y    ++ GH +  +   +I  LIDCTL+D G     T++   ++
Sbjct: 132 KITKSIDDALQLSKIYGFSGIDNGHVIIFFMMFVITKLIDCTLEDCGFPSGLTEEQGSIY 191

Query: 176 GDGGCQIMDVESKLDHQDMRTDLHDRLHRMNSTRTVEVLGELTENRKAVVLLHLMLLN 3
              G Q MD++ K    + + +   +L R N+   ++VL  +  +RK    L L+ LN
Sbjct: 192 AIEGPQDMDLDVKGVSTEKQNEHRAQLRRKNTVMALDVLIMMVADRKIQSFLRLIFLN 249


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