BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020323
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   111   5e-23
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               109   2e-22
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   109   3e-22
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   109   3e-22
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   4e-22

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/139 (42%), Positives = 81/139 (58%)
 Frame = -3

Query: 417 ENQILTACPSDDDIWHVVKKLGSLKSPGPDGFQGIFYQQCWDVVGKSITDCVKDFFINGK 238
           +N  LT+  S ++I + V  L   KSPGPDGF   F+Q+ W ++GKS+   V+ FF +G 
Sbjct: 436 DNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGY 495

Query: 237 MNPRLNDTFLTLIPKISNPDHVSKFRPISLCNFCYXXXXXXXXXXXXXXINKIVSPFQGA 58
           M   +N TFL LIPK+  P + + FRPISLC+  Y              + KI+ P QGA
Sbjct: 496 MLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGA 555

Query: 57  FIKGRSIGDNIGLACEIFN 1
           FI  R I DNI +A E+F+
Sbjct: 556 FIPERLIQDNILIAHEVFH 574


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/138 (41%), Positives = 77/138 (55%)
 Frame = -3

Query: 414 NQILTACPSDDDIWHVVKKLGSLKSPGPDGFQGIFYQQCWDVVGKSITDCVKDFFINGKM 235
           N  LT    D +I+  + ++G  K+PGPDG    FY+QCWD+VG  +   VK FF +  M
Sbjct: 42  NSELTQDFRDSEIFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHM 101

Query: 234 NPRLNDTFLTLIPKISNPDHVSKFRPISLCNFCYXXXXXXXXXXXXXXINKIVSPFQGAF 55
              +N T + +IPKI NP  +S +RPI+LCN  Y              +N IVS  Q AF
Sbjct: 102 KTSVNHTNICMIPKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAF 161

Query: 54  IKGRSIGDNIGLACEIFN 1
           I GR I DN+ +A EI +
Sbjct: 162 IPGRIINDNVMIAHEIMH 179


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/138 (41%), Positives = 78/138 (56%)
 Frame = -3

Query: 414 NQILTACPSDDDIWHVVKKLGSLKSPGPDGFQGIFYQQCWDVVGKSITDCVKDFFINGKM 235
           N  LT   SD +I+  + ++G  K+PGPDG    FY+ CWD+VG  +   VK FF    M
Sbjct: 577 NLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFM 636

Query: 234 NPRLNDTFLTLIPKISNPDHVSKFRPISLCNFCYXXXXXXXXXXXXXXINKIVSPFQGAF 55
            P +N T + +IPKI+NP  +S +RPI+LCN  Y              +N IVS  Q AF
Sbjct: 637 KPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAF 696

Query: 54  IKGRSIGDNIGLACEIFN 1
           I GR I DN+ +A E+ +
Sbjct: 697 IPGRIINDNVMIAHEVMH 714


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/138 (41%), Positives = 78/138 (56%)
 Frame = -3

Query: 414  NQILTACPSDDDIWHVVKKLGSLKSPGPDGFQGIFYQQCWDVVGKSITDCVKDFFINGKM 235
            N  LT   SD +I+  + ++G  K+PGPDG    FY+ CWD+VG  +   VK FF    M
Sbjct: 803  NLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFM 862

Query: 234  NPRLNDTFLTLIPKISNPDHVSKFRPISLCNFCYXXXXXXXXXXXXXXINKIVSPFQGAF 55
             P +N T + +IPKI+NP  +S +RPI+LCN  Y              +N IVS  Q AF
Sbjct: 863  KPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAF 922

Query: 54   IKGRSIGDNIGLACEIFN 1
            I GR I DN+ +A E+ +
Sbjct: 923  IPGRIINDNVMIAHEVMH 940


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/128 (41%), Positives = 74/128 (57%)
 Frame = -3

Query: 384 DDIWHVVKKLGSLKSPGPDGFQGIFYQQCWDVVGKSITDCVKDFFINGKMNPRLNDTFLT 205
           +++ +VV ++GSLK+PGPDG   IFYQ+ W +VG+ I   V  FF  G +    N T + 
Sbjct: 444 EEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNIC 503

Query: 204 LIPKISNPDHVSKFRPISLCNFCYXXXXXXXXXXXXXXINKIVSPFQGAFIKGRSIGDNI 25
           LIPK+  P+   +FRPISLCN  Y              +  IV+P+Q AF+ GR I DN 
Sbjct: 504 LIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDNC 563

Query: 24  GLACEIFN 1
            +A E+ N
Sbjct: 564 LIAHEVVN 571