BLASTX nr result

ID: Coptis23_contig00020314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020314
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550028.1| PREDICTED: probable hexaprenyl pyrophosphate...   140   1e-31
gb|AEZ55677.1| geranyl diphosphate synthase [Salvia miltiorrhiza]     139   2e-31
emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]           139   2e-31
ref|XP_003525839.1| PREDICTED: probable hexaprenyl pyrophosphate...   138   4e-31
ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putat...   136   2e-30

>ref|XP_003550028.1| PREDICTED: probable hexaprenyl pyrophosphate synthase,
           mitochondrial-like [Glycine max]
          Length = 419

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/74 (95%), Positives = 73/74 (98%)
 Frame = +3

Query: 3   DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 182
           DVLDDADTRRGIGSLN+VMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT
Sbjct: 179 DVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 238

Query: 183 GETMQMTTTSEQHC 224
           GETMQMTTTS+Q C
Sbjct: 239 GETMQMTTTSDQRC 252


>gb|AEZ55677.1| geranyl diphosphate synthase [Salvia miltiorrhiza]
          Length = 424

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = +3

Query: 3   DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 182
           DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVV+L+A+VVEHLVT
Sbjct: 184 DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLIAQVVEHLVT 243

Query: 183 GETMQMTTTSEQHC 224
           GETMQMTTTSEQ C
Sbjct: 244 GETMQMTTTSEQRC 257


>emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]
          Length = 416

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/74 (95%), Positives = 72/74 (97%)
 Frame = +3

Query: 3   DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 182
           DVLDDADTRRGIGSLN+VMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT
Sbjct: 176 DVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 235

Query: 183 GETMQMTTTSEQHC 224
           GETMQMTTT EQ C
Sbjct: 236 GETMQMTTTCEQRC 249


>ref|XP_003525839.1| PREDICTED: probable hexaprenyl pyrophosphate synthase,
           mitochondrial-like [Glycine max]
          Length = 480

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = +3

Query: 3   DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 182
           DVLDDAD+RRGIGSLN+VMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT
Sbjct: 240 DVLDDADSRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 299

Query: 183 GETMQMTTTSEQHC 224
           GETMQMTTTS+Q C
Sbjct: 300 GETMQMTTTSDQRC 313


>ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate
           synthase, putative [Ricinus communis]
          Length = 417

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/74 (93%), Positives = 72/74 (97%)
 Frame = +3

Query: 3   DVLDDADTRRGIGSLNYVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVT 182
           DVLDDADTRRGIGSLN+VMGNK+AVLAGDFLLSRACVALASLKNTEVVSLLA VVEHLVT
Sbjct: 177 DVLDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVT 236

Query: 183 GETMQMTTTSEQHC 224
           GETMQMT+TSEQ C
Sbjct: 237 GETMQMTSTSEQRC 250


Top