BLASTX nr result

ID: Coptis23_contig00020304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020304
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307528.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_003536394.1| PREDICTED: uncharacterized protein LOC100793...   146   2e-33
ref|XP_002531980.1| conserved hypothetical protein [Ricinus comm...   145   5e-33
ref|NP_001235784.1| uncharacterized protein LOC100500538 [Glycin...   141   1e-31
ref|XP_002300893.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_002307528.1| predicted protein [Populus trichocarpa] gi|222856977|gb|EEE94524.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  147 bits (370), Expect = 2e-33
 Identities = 76/145 (52%), Positives = 89/145 (61%)
 Frame = +3

Query: 102 IDPLSSDATILNQPVEVSGIAPNLTSHITVNSHAVYEYMQXXXXXXXXXXXXXXXIGILG 281
           +D   S   I  +P  +  +  N+   I   S A    +Q               +GILG
Sbjct: 63  VDLAMSHGDISGEPFSIPEVVGNINVGIPKTSDATSNLIQRLMLADLDPAAAKSAVGILG 122

Query: 282 PLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPTRKLIXXXXXXXXXXXXW 461
           P  SAFSFLFI+RIVMSWYPKLPVGKFPY+L YAPTEP+LIPTRKLI            W
Sbjct: 123 PFLSAFSFLFILRIVMSWYPKLPVGKFPYVLVYAPTEPLLIPTRKLIPPLGGVDVTPVVW 182

Query: 462 FGLISFLSEILVGPQGLLKLLSQQV 536
           FGL+SFL+EILVGPQGLL LLSQQ+
Sbjct: 183 FGLLSFLNEILVGPQGLLVLLSQQI 207


>ref|XP_003536394.1| PREDICTED: uncharacterized protein LOC100793885 [Glycine max]
          Length = 218

 Score =  146 bits (369), Expect = 2e-33
 Identities = 82/163 (50%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
 Frame = +3

Query: 60  CSTYLPLG----FMTSSLIDPLSSDATILNQPVEVSGIAPNLTSHITVNSHAVYEYMQXX 227
           CS Y  +G       SSL+D  ++  + LN  V+++ +  ++       SHA  ++M   
Sbjct: 60  CSCYTEVGASAGITISSLVDAATTQIS-LNSDVDLNTLKLSMPE----TSHASSDFMTRL 114

Query: 228 XXXXXXXXXXXXXIGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIP 407
                        IG LGP  S F FLFIVRIVMSWYPKLPVGKFPY++AYAPTEP+LIP
Sbjct: 115 VLADLDPATAKLAIGFLGPFLSVFGFLFIVRIVMSWYPKLPVGKFPYVIAYAPTEPLLIP 174

Query: 408 TRKLIXXXXXXXXXXXXWFGLISFLSEILVGPQGLLKLLSQQV 536
           TRK+I            WFGLISFL+EILVGPQGLL LLSQQV
Sbjct: 175 TRKVIAPLAGVDVTPVVWFGLISFLNEILVGPQGLLVLLSQQV 217


>ref|XP_002531980.1| conserved hypothetical protein [Ricinus communis]
           gi|223528377|gb|EEF30416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  145 bits (366), Expect = 5e-33
 Identities = 75/142 (52%), Positives = 91/142 (64%)
 Frame = +3

Query: 111 LSSDATILNQPVEVSGIAPNLTSHITVNSHAVYEYMQXXXXXXXXXXXXXXXIGILGPLF 290
           L + ATI  +P+       N+  ++   S A  +++Q               IG LGP  
Sbjct: 61  LPTYATISERPLNSFEDVQNINLNVVKTSEATSKFIQSSVVADLDPATAKLAIGFLGPFL 120

Query: 291 SAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPTRKLIXXXXXXXXXXXXWFGL 470
           SAF FLFI+RIVMSWYPKLPVGKFPY++AYAPTEPIL+PTRK+I            WFGL
Sbjct: 121 SAFGFLFILRIVMSWYPKLPVGKFPYVIAYAPTEPILVPTRKVIPPVGGVDVTPVVWFGL 180

Query: 471 ISFLSEILVGPQGLLKLLSQQV 536
           ISFL+EIL+GPQGLL LLSQQV
Sbjct: 181 ISFLNEILLGPQGLLVLLSQQV 202


>ref|NP_001235784.1| uncharacterized protein LOC100500538 [Glycine max]
           gi|255630585|gb|ACU15652.1| unknown [Glycine max]
          Length = 218

 Score =  141 bits (355), Expect = 1e-31
 Identities = 82/162 (50%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
 Frame = +3

Query: 60  CSTYLPLGFMTSSLIDPLSSDATI---LNQPVEVSGIAPNLTSHITVNSHAVYEYMQXXX 230
           CS Y  +G      I  L + AT    LN  V+++     L   I   S A  + M    
Sbjct: 60  CSCYTEVGASAGITISSLVNAATTHISLNSDVDLN----TLKLSIQETSPASTDLMTRLV 115

Query: 231 XXXXXXXXXXXXIGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPT 410
                       IG LGP  S F FLFI+RIVMSWYPKLPVGKFPY++AYAPTEP+LIPT
Sbjct: 116 LADLDPDTAKLAIGFLGPFLSVFGFLFILRIVMSWYPKLPVGKFPYVIAYAPTEPLLIPT 175

Query: 411 RKLIXXXXXXXXXXXXWFGLISFLSEILVGPQGLLKLLSQQV 536
           RK+I            WFGLISFL+EILVGPQGLL LLSQQV
Sbjct: 176 RKVIPPLAGMDVTPVVWFGLISFLNEILVGPQGLLVLLSQQV 217


>ref|XP_002300893.1| predicted protein [Populus trichocarpa] gi|222842619|gb|EEE80166.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = +3

Query: 267 IGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPTRKLIXXXXXXXX 446
           IGILGP  SAFSFLF++RIVMSWYPKLPVGKFPY++AYAPTEP+LIPTRKLI        
Sbjct: 14  IGILGPFLSAFSFLFVLRIVMSWYPKLPVGKFPYVIAYAPTEPLLIPTRKLIPPLGGVDV 73

Query: 447 XXXXWFGLISFLSEILVGPQGLLKLLSQQV 536
               WFGL SFL+EILVGPQGLL LLSQQ+
Sbjct: 74  TPVVWFGLSSFLNEILVGPQGLLVLLSQQI 103


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