BLASTX nr result

ID: Coptis23_contig00020303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020303
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea ma...   167   2e-39
ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [R...   167   4e-39
ref|XP_002452409.1| hypothetical protein SORBIDRAFT_04g025220 [S...   165   1e-38
ref|NP_001047360.1| Os02g0602800 [Oryza sativa Japonica Group] g...   164   2e-38

>ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|222861891|gb|EEE99433.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  167 bits (424), Expect = 2e-39
 Identities = 84/129 (65%), Positives = 93/129 (72%)
 Frame = -3

Query: 922 EITEQKKVXXXXXXXXXXXXXXXXXXXFDRGLIALGNILSLSGVALLLGWRSTWQLFTKR 743
           EI E KK+                   FDRGL+ALGNI  LSGVA+LLGWRSTW+LFT R
Sbjct: 4   EINELKKIGLGLIGFGIFFTFLGALLFFDRGLLALGNIFWLSGVAILLGWRSTWKLFTNR 63

Query: 742 VNYKGSVPFLLGLFLIFVRWPIVGIIMEIYGSIILFSGFSPSIKVFLYQIPIVGWILQYP 563
            NYKGSV FLLGLF IFVRWP+VGII EIY  I LF GF PS+KVFLYQIP+VGWI+QYP
Sbjct: 64  ENYKGSVCFLLGLFFIFVRWPVVGIIFEIYSCIALFGGFWPSVKVFLYQIPVVGWIIQYP 123

Query: 562 FLLLDQLRK 536
             LLD LR+
Sbjct: 124 ITLLDYLRR 132


>ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea mays]
           gi|194693248|gb|ACF80708.1| unknown [Zea mays]
           gi|195623924|gb|ACG33792.1| golgi transport 1 protein B
           [Zea mays] gi|413922933|gb|AFW62865.1| golgi transport 1
           protein B isoform 1 [Zea mays]
           gi|413922934|gb|AFW62866.1| golgi transport 1 protein B
           isoform 2 [Zea mays]
          Length = 135

 Score =  167 bits (424), Expect = 2e-39
 Identities = 80/129 (62%), Positives = 95/129 (73%)
 Frame = -3

Query: 922 EITEQKKVXXXXXXXXXXXXXXXXXXXFDRGLIALGNILSLSGVALLLGWRSTWQLFTKR 743
           EI+E KK+                   FDRGL+ALGNI  L+GV LLLGW+S WQLFTK+
Sbjct: 4   EISEIKKIGIGLVGFGILFSFLGVILFFDRGLLALGNIFFLTGVGLLLGWQSMWQLFTKK 63

Query: 742 VNYKGSVPFLLGLFLIFVRWPIVGIIMEIYGSIILFSGFSPSIKVFLYQIPIVGWILQYP 563
            N KGSVPF +GLFL+FVRWP+ GIIME+YGS +LFSG+ P I+ FLYQIPI+GWILQYP
Sbjct: 64  ANLKGSVPFFIGLFLLFVRWPVAGIIMELYGSFVLFSGYGPPIQAFLYQIPIIGWILQYP 123

Query: 562 FLLLDQLRK 536
           F LL QLR+
Sbjct: 124 FQLLGQLRR 132


>ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [Ricinus communis]
           gi|223529400|gb|EEF31363.1| Vesicle transport protein
           GOT1B, putative [Ricinus communis]
          Length = 135

 Score =  167 bits (422), Expect = 4e-39
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -3

Query: 922 EITEQKKVXXXXXXXXXXXXXXXXXXXFDRGLIALGNILSLSGVALLLGWRSTWQLFTKR 743
           E+ EQKK+                   FDRGL+ALGNI  L+GVA+LLGW STW LFT R
Sbjct: 4   ELNEQKKIGLGLIGFGILFSFLGVLLFFDRGLLALGNIFWLTGVAILLGWHSTWNLFTNR 63

Query: 742 VNYKGSVPFLLGLFLIFVRWPIVGIIMEIYGSIILFSGFSPSIKVFLYQIPIVGWILQYP 563
            NYKG++ FLLGLF IFVRWPIVGI++EIYG I LF GF P++KVFLYQIP+VGWI+QYP
Sbjct: 64  ANYKGTISFLLGLFFIFVRWPIVGIVLEIYGCIALFGGFWPTVKVFLYQIPVVGWIIQYP 123

Query: 562 FLLLDQLR 539
            LLL +LR
Sbjct: 124 VLLLGRLR 131


>ref|XP_002452409.1| hypothetical protein SORBIDRAFT_04g025220 [Sorghum bicolor]
           gi|241932240|gb|EES05385.1| hypothetical protein
           SORBIDRAFT_04g025220 [Sorghum bicolor]
          Length = 135

 Score =  165 bits (418), Expect = 1e-38
 Identities = 79/129 (61%), Positives = 93/129 (72%)
 Frame = -3

Query: 922 EITEQKKVXXXXXXXXXXXXXXXXXXXFDRGLIALGNILSLSGVALLLGWRSTWQLFTKR 743
           EI+E KK+                   FDRGL+ALGNI  L+GV LLLGW+S WQLFTK+
Sbjct: 4   EISEIKKIGIGLVGFGILFSFLGVILFFDRGLLALGNIFFLTGVGLLLGWQSMWQLFTKK 63

Query: 742 VNYKGSVPFLLGLFLIFVRWPIVGIIMEIYGSIILFSGFSPSIKVFLYQIPIVGWILQYP 563
            N KGSVPF  GLFL+FVRWP+ GIIME+YGS +LFSG+ P I+ FLYQIPI+GWILQYP
Sbjct: 64  ANLKGSVPFFFGLFLLFVRWPVAGIIMELYGSFVLFSGYGPPIQAFLYQIPIIGWILQYP 123

Query: 562 FLLLDQLRK 536
           F L  QLR+
Sbjct: 124 FQLFGQLRR 132


>ref|NP_001047360.1| Os02g0602800 [Oryza sativa Japonica Group]
           gi|47497305|dbj|BAD19347.1| NFkB activating protein-like
           [Oryza sativa Japonica Group]
           gi|113536891|dbj|BAF09274.1| Os02g0602800 [Oryza sativa
           Japonica Group] gi|215695569|dbj|BAG90760.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 135

 Score =  164 bits (416), Expect = 2e-38
 Identities = 77/129 (59%), Positives = 93/129 (72%)
 Frame = -3

Query: 922 EITEQKKVXXXXXXXXXXXXXXXXXXXFDRGLIALGNILSLSGVALLLGWRSTWQLFTKR 743
           EI+E KK+                   FDRGL+ALGNI  L+G+ LLLGW+S WQLFTK+
Sbjct: 4   EISEIKKIGIGLVGFGILFSFFGVILFFDRGLLALGNIFFLTGIGLLLGWQSMWQLFTKK 63

Query: 742 VNYKGSVPFLLGLFLIFVRWPIVGIIMEIYGSIILFSGFSPSIKVFLYQIPIVGWILQYP 563
            N KGSVPF LGLFL+FVRWP+ GIIME+YGS +LFSG+ P I+ FLYQIP++GWILQYP
Sbjct: 64  ANIKGSVPFFLGLFLLFVRWPVAGIIMELYGSFVLFSGYGPPIQAFLYQIPVIGWILQYP 123

Query: 562 FLLLDQLRK 536
           F L  Q R+
Sbjct: 124 FQLFGQFRR 132


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