BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020302
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   114   3e-23
ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   110   5e-22
ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   107   4e-21
ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   104   3e-20

>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score =  114 bits (285), Expect = 3e-23
 Identities = 72/215 (33%), Positives = 93/215 (43%), Gaps = 48/215 (22%)
 Frame = +1

Query: 229 WNLAXXXXXXXXXXCTLSEYTTTPIRIWIGVYAFLCVVHVTLISVE-------------- 366
           WN+A          CT SE+ TTPIR+WI  YA  C+VHV L+ +E              
Sbjct: 76  WNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSRSGSQ 135

Query: 367 ---------------------------TYYSSIGKIWKTLLTAASFAWWIVGIYWIVSGG 465
                                      T  S   K  ++L T  SF WWIVG YW+VSGG
Sbjct: 136 RARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCESLNTGVSFLWWIVGFYWVVSGG 195

Query: 466 YLLQHYAPRLYWLVVVFLAMRAVFYLVAXXXXXXXXXXXXXXXSYI-------GGQEGAT 624
            +L   APRLYWL VVFLA    F +                   I        GQEGA+
Sbjct: 196 DILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGAS 255

Query: 625 ESDVGVLTKYTYQTSDNAEELYAGAGSTVPVAGKS 729
           E+D+ +L KY ++   + ++   GAGS VP+   S
Sbjct: 256 EADLSMLPKYKFRILSDVDKPSGGAGSMVPIETSS 290


>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score =  110 bits (275), Expect = 5e-22
 Identities = 72/209 (34%), Positives = 92/209 (44%), Gaps = 42/209 (20%)
 Frame = +1

Query: 229 WNLAXXXXXXXXXXCTLSEYTTTPIRIWIGVYAFLCVVHVTLISVETY------------ 372
           WN+A          CT +E   TPIR+WI  YA  C+VHV L+ +E              
Sbjct: 77  WNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSHHGQR 136

Query: 373 --------------YS---------SIGKIWKTLLTAASFAWWIVGIYWIVSGGYLLQHY 483
                         YS         S  K  + L T  SF WWIVG YW+VSGG +L   
Sbjct: 137 ARDVESDAGSGDEDYSDDRDWSSGYSFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQD 196

Query: 484 APRLYWLVVVFLAMRAVFYLVAXXXXXXXXXXXXXXXSYI-------GGQEGATESDVGV 642
           APRLYWLVVVFLA    F +                   I        GQEGA+E+D+ +
Sbjct: 197 APRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSM 256

Query: 643 LTKYTYQTSDNAEELYAGAGSTVPVAGKS 729
           L KY ++   + ++   GAGS VP+   S
Sbjct: 257 LPKYRFRILSDEDKPSGGAGSMVPIETSS 285


>ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
           max]
          Length = 334

 Score =  107 bits (267), Expect = 4e-21
 Identities = 68/195 (34%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
 Frame = +1

Query: 229 WNLAXXXXXXXXXXCTLSEYTTTPIRIWIGVYAFLCVVHVTLISVE-------------- 366
           WN+A          CT+ E   TPIR WI  YA  C+VHV L+ +E              
Sbjct: 69  WNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESA 128

Query: 367 --TYYSSIG---------KIWKTLLTAASFAWWIVGIYWIVSGGYLLQHYAPRLYWLVVV 513
               Y  +          K   +L T  S  WW+VG YW+VSGG +L   APRLYWL VV
Sbjct: 129 ASLQYDDVNDSDEDARFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVV 188

Query: 514 FLAMRAVFYLVAXXXXXXXXXXXXXXXSYI-------GGQEGATESDVGVLTKYTYQTSD 672
           FLA    F +                   I        GQEGA+ESD+ +L KY +Q   
Sbjct: 189 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLS 248

Query: 673 NAEELYAGAGSTVPV 717
           N E    G GS +P+
Sbjct: 249 NEETPGEGGGSMIPM 263


>ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|222863822|gb|EEF00953.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  105 bits (263), Expect = 1e-20
 Identities = 68/187 (36%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
 Frame = +1

Query: 229 WNLAXXXXXXXXXXCTLSEYTTTPIRIWIGVYAFLCVVHVTLISVETYYSS--------- 381
           WN A           T  E   TPIR+WI  Y+  C+VHV L+ +E    +         
Sbjct: 45  WNAAFVVVSVTMLVVTAKERPNTPIRLWICGYSLQCLVHVILVWLEYRRRNTRRGRDVES 104

Query: 382 ---IGKIWKTLLTAASFAWWIVGIYWIVSGGYLLQHYAPRLYWLVVVFLAMRAVFYLVAX 552
                K  +++ T  SF WWIVG YW+VSGG  L   APRLYWL VVFLA    F +   
Sbjct: 105 EQHFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCV 164

Query: 553 XXXXXXXXXXXXXXSYI-------GGQEGATESDVGVLTKYTYQTSDNAEEL-YAGAGST 708
                           I        GQEGA+E+D+ +L KY Y    N E+    GAG  
Sbjct: 165 VLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEEKRPRVGAGKM 224

Query: 709 VPVAGKS 729
           VPV   S
Sbjct: 225 VPVETSS 231


>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
           max]
          Length = 344

 Score =  104 bits (259), Expect = 3e-20
 Identities = 68/205 (33%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
 Frame = +1

Query: 229 WNLAXXXXXXXXXXCTLSEYTTTPIRIWIGVYAFLCVVHVTLISVE-------------- 366
           WN+A          CT+ E   TPIR WI  YA  C+VHV L+ +E              
Sbjct: 69  WNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESA 128

Query: 367 ---------------------TYYSSIGKIWKTLLTAASFAWWIVGIYWIVSGGYLLQHY 483
                                +  S   K   +L T  S  WW+VG YW+VSGG +L   
Sbjct: 129 ASLQYDDVNDSDEDDVGTSGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQD 188

Query: 484 APRLYWLVVVFLAMRAVFYLVAXXXXXXXXXXXXXXXSYI-------GGQEGATESDVGV 642
           APRLYWL VVFLA    F +                   I        GQEGA+ESD+ +
Sbjct: 189 APRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSI 248

Query: 643 LTKYTYQTSDNAEELYAGAGSTVPV 717
           L KY +Q   N E    G GS +P+
Sbjct: 249 LPKYRFQLLSNEETPGEGGGSMIPM 273