BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020298
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   432   e-119
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12...   414   e-113
ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12...   413   e-113
ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12...   413   e-113

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
           vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score =  432 bits (1112), Expect = e-119
 Identities = 195/266 (73%), Positives = 227/266 (85%)
 Frame = +1

Query: 7   VNSKGVESDTSLHIATASKDRTVRLWKFDAEEHYNQPRKITAYKVLKGHTAAVQSVVSHP 186
           ++ KG+ES  +  +ATASKDRT+RLWKFDA E ++ P KI A+K+L GH A+VQSV   P
Sbjct: 161 IDPKGLESVNNSVVATASKDRTLRLWKFDAGERHDLPLKIRAFKILHGHNASVQSVAVQP 220

Query: 187 SGDMVCSGSWDSTINLWRTNDSEAEGDLASIKKRKVGTDAKESQLEGEAVSTFVGHTQCV 366
           +G+MVCSGSWD TINLWRT++ + EGDL S+KKRKV  +A+ESQ EGEAVST VGHTQCV
Sbjct: 221 TGNMVCSGSWDCTINLWRTDEFDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQCV 280

Query: 367 SSVVWPEREDIYSASWDHSIRRWDIETGKDTLNVFTGKVLNCVDVGGEGSSLIAAGGSDP 546
           SSV+WP+ E IYSASWDHS+RRWD+ETGKD+ N+F GK LNC+DVGGE S+LIAAGGSD 
Sbjct: 281 SSVIWPQHETIYSASWDHSVRRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSDT 340

Query: 547 VLRIWDPRRPGNVAPTFQFSSHSSWIMACKWHKKSWFHLLSASYDGKVMLWDLRTAWPLA 726
            LRIWDPR+PG + P FQFSSH+SWI ACKWH KSWFHLLSASYDGKVMLWDLRTAWPLA
Sbjct: 341 TLRIWDPRKPGTLTPVFQFSSHTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAWPLA 400

Query: 727 VIDSHKDKVLCADWWKDDCVISGGAD 804
           VIDSH +KVLCADWWK D V+SGGAD
Sbjct: 401 VIDSHNNKVLCADWWKGDSVVSGGAD 426


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  422 bits (1085), Expect = e-116
 Identities = 194/268 (72%), Positives = 223/268 (83%)
 Frame = +1

Query: 1   SLVNSKGVESDTSLHIATASKDRTVRLWKFDAEEHYNQPRKITAYKVLKGHTAAVQSVVS 180
           S+VNS+G +S T   +ATASKD T+RLWKFD EEH +QP KI A+K+L+GH A VQSV +
Sbjct: 157 SVVNSEGTDSVT---VATASKDETLRLWKFDTEEHLDQPSKIRAFKILRGHNAPVQSVAA 213

Query: 181 HPSGDMVCSGSWDSTINLWRTNDSEAEGDLASIKKRKVGTDAKESQLEGEAVSTFVGHTQ 360
             SG M+CSGSWD TINLWRTN+S+ E DL SIKKRKV   A ESQLEG A+ST VGHTQ
Sbjct: 214 EASGSMICSGSWDCTINLWRTNESDTESDLVSIKKRKVKNKAGESQLEGGALSTLVGHTQ 273

Query: 361 CVSSVVWPEREDIYSASWDHSIRRWDIETGKDTLNVFTGKVLNCVDVGGEGSSLIAAGGS 540
           CVSSV WPE   IYSASWDHS+RRWD+E GKD  N+F GK L+C+ VGGEGS+LIAAGGS
Sbjct: 274 CVSSVYWPEPNTIYSASWDHSVRRWDVEMGKDLSNIFCGKALHCLHVGGEGSALIAAGGS 333

Query: 541 DPVLRIWDPRRPGNVAPTFQFSSHSSWIMACKWHKKSWFHLLSASYDGKVMLWDLRTAWP 720
           DP+LR+WDPR+PG  AP +QFSSH+SWI ACKWH +S FHLLSASYDGK+MLWDLRTAWP
Sbjct: 334 DPILRVWDPRKPGTSAPIYQFSSHNSWISACKWHSESLFHLLSASYDGKLMLWDLRTAWP 393

Query: 721 LAVIDSHKDKVLCADWWKDDCVISGGAD 804
           LA+IDSH+DKVLCADWWK D VISGG D
Sbjct: 394 LAIIDSHEDKVLCADWWKGDSVISGGVD 421


>ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 427

 Score =  414 bits (1064), Expect = e-113
 Identities = 191/268 (71%), Positives = 224/268 (83%)
 Frame = +1

Query: 1   SLVNSKGVESDTSLHIATASKDRTVRLWKFDAEEHYNQPRKITAYKVLKGHTAAVQSVVS 180
           S++N KG E+ T   +ATASKDRT+RLWK + E+  N P ++ AYK+L+GH ++VQSV  
Sbjct: 152 SIINPKGAETVT---VATASKDRTLRLWKLNTEDPVNHPMRVRAYKILRGHKSSVQSVAV 208

Query: 181 HPSGDMVCSGSWDSTINLWRTNDSEAEGDLASIKKRKVGTDAKESQLEGEAVSTFVGHTQ 360
             SG+MVCSGSWD TINLW+TND  AE D  S KKRKVG   +ESQLEGEA +T VGHTQ
Sbjct: 209 QTSGEMVCSGSWDCTINLWQTNDFNAEDDQVS-KKRKVGGQVEESQLEGEAFTTLVGHTQ 267

Query: 361 CVSSVVWPEREDIYSASWDHSIRRWDIETGKDTLNVFTGKVLNCVDVGGEGSSLIAAGGS 540
           CVSSVVWP+RE IYSASWDHSIR+WD+E GK+  ++F GKVLNC+D+GGEGS+LIAAGGS
Sbjct: 268 CVSSVVWPQRELIYSASWDHSIRKWDVEIGKNLTDIFCGKVLNCLDIGGEGSALIAAGGS 327

Query: 541 DPVLRIWDPRRPGNVAPTFQFSSHSSWIMACKWHKKSWFHLLSASYDGKVMLWDLRTAWP 720
           DPVLRIWDPR+PG  AP FQF+SH+SW+ ACKWH +SWFHLLSASYDGKVMLWDLRTAWP
Sbjct: 328 DPVLRIWDPRKPGTSAPVFQFASHTSWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWP 387

Query: 721 LAVIDSHKDKVLCADWWKDDCVISGGAD 804
           L+VI+SH DKVL ADWWK D VISGGAD
Sbjct: 388 LSVIESHSDKVLSADWWKSDSVISGGAD 415


>ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  413 bits (1061), Expect = e-113
 Identities = 188/268 (70%), Positives = 224/268 (83%)
 Frame = +1

Query: 1   SLVNSKGVESDTSLHIATASKDRTVRLWKFDAEEHYNQPRKITAYKVLKGHTAAVQSVVS 180
           S++N KG E+ T   +ATASKDRT+RLWK +A +H N P ++ AYK+L+GH ++VQ V  
Sbjct: 160 SIINPKGEETVT---VATASKDRTLRLWKLNAGDHVNNPMRVRAYKILRGHKSSVQCVAV 216

Query: 181 HPSGDMVCSGSWDSTINLWRTNDSEAEGDLASIKKRKVGTDAKESQLEGEAVSTFVGHTQ 360
             +G+MVCS SWD TINLW+TND  AE DL S KKRK+G   +ESQLEGEA +T VGHTQ
Sbjct: 217 QTAGEMVCSASWDCTINLWQTNDFNAEDDLVS-KKRKIGAQVEESQLEGEAFTTLVGHTQ 275

Query: 361 CVSSVVWPEREDIYSASWDHSIRRWDIETGKDTLNVFTGKVLNCVDVGGEGSSLIAAGGS 540
           CVS+VVWP+RE IYSASWDHSIR+WD+ETGK+  ++F GKVLNC+D+GGEGS+LIAAGGS
Sbjct: 276 CVSAVVWPQRESIYSASWDHSIRKWDVETGKNLTDLFCGKVLNCLDIGGEGSTLIAAGGS 335

Query: 541 DPVLRIWDPRRPGNVAPTFQFSSHSSWIMACKWHKKSWFHLLSASYDGKVMLWDLRTAWP 720
           DPV+RIWDPR+PG  AP FQFSSH SW+ ACKWH +SWFHLLSASYDGKVMLWDLRTAWP
Sbjct: 336 DPVIRIWDPRKPGTSAPVFQFSSHMSWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWP 395

Query: 721 LAVIDSHKDKVLCADWWKDDCVISGGAD 804
           L+VI+SH DKVL ADWWK + VISGGAD
Sbjct: 396 LSVIESHSDKVLSADWWKSNSVISGGAD 423


>ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  413 bits (1061), Expect = e-113
 Identities = 188/268 (70%), Positives = 224/268 (83%)
 Frame = +1

Query: 1   SLVNSKGVESDTSLHIATASKDRTVRLWKFDAEEHYNQPRKITAYKVLKGHTAAVQSVVS 180
           S++N KG E+ T   +ATASKDRT+RLWK +A +H N P ++ AYK+L+GH ++VQ V  
Sbjct: 160 SIINPKGEETVT---VATASKDRTLRLWKLNAGDHVNNPMRVRAYKILRGHKSSVQCVAV 216

Query: 181 HPSGDMVCSGSWDSTINLWRTNDSEAEGDLASIKKRKVGTDAKESQLEGEAVSTFVGHTQ 360
             +G+MVCS SWD TINLW+TND  AE DL S KKRK+G   +ESQLEGEA +T VGHTQ
Sbjct: 217 QTAGEMVCSASWDCTINLWQTNDFNAEDDLVS-KKRKIGAQVEESQLEGEAFTTLVGHTQ 275

Query: 361 CVSSVVWPEREDIYSASWDHSIRRWDIETGKDTLNVFTGKVLNCVDVGGEGSSLIAAGGS 540
           CVS+VVWP+RE IYSASWDHSIR+WD+ETGK+  ++F GKVLNC+D+GGEGS+LIAAGGS
Sbjct: 276 CVSAVVWPQRESIYSASWDHSIRKWDVETGKNLTDLFCGKVLNCLDIGGEGSTLIAAGGS 335

Query: 541 DPVLRIWDPRRPGNVAPTFQFSSHSSWIMACKWHKKSWFHLLSASYDGKVMLWDLRTAWP 720
           DPV+RIWDPR+PG  AP FQFSSH SW+ ACKWH +SWFHLLSASYDGKVMLWDLRTAWP
Sbjct: 336 DPVIRIWDPRKPGTSAPVFQFSSHMSWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWP 395

Query: 721 LAVIDSHKDKVLCADWWKDDCVISGGAD 804
           L+VI+SH DKVL ADWWK + VISGGAD
Sbjct: 396 LSVIESHSDKVLSADWWKSNSVISGGAD 423