BLASTX nr result

ID: Coptis23_contig00020297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020297
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec...   190   8e-46
dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]         186   9e-45
emb|CBI23997.3| unnamed protein product [Vitis vinifera]              186   9e-45
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   186   1e-44
emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]   185   2e-44

>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865805|gb|EEF02936.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 883

 Score =  190 bits (482), Expect = 8e-46
 Identities = 109/297 (36%), Positives = 164/297 (55%), Gaps = 5/297 (1%)
 Frame = -3

Query: 1235 TITAKRSLSVDFSRPYTNGGIAMLVPKAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 1056
            TI   RS  VDF+ PYT  G++M+VP     S    +F  P TW +W TS   FI +  +
Sbjct: 516  TIVFNRSQYVDFTLPYTESGVSMIVPIVDNNSKNAWVFLRPLTWDLWVTSFCFFIFIGFV 575

Query: 1055 RWYFQAVIMYEIPKVGRIIFIVTTFFSSLLLEPFGTKVVDGLRTAPNFILKIFLAPFCFF 876
             W  +  I  +           + +FS      F   V     T  + + ++ +  +CF 
Sbjct: 576  IWVLEHRINEDFRGPASHQAGTSFWFS------FSIMVFAQRETVVSNLSRVVVIIWCFV 629

Query: 875  MIWIYCDLYMKNLND----DSGQLMAVDVKDLIRNGDYVGYQKDSLVEKVLMDLKFDESK 708
            ++ I    Y  +L+        +    DV +LI+ G+YVGYQ+ S V+ +L+DL FDESK
Sbjct: 630  VL-ILTQSYTASLSSLLTVHQLRPTVTDVHELIKKGEYVGYQEGSFVKGILLDLGFDESK 688

Query: 707  LRVYDSLEEYEEALDKGSKNGGVAAIFDEMPYIKLLLTKFGYKYRTVGPIYQLDGFGFGF 528
            L VY++ E++++ L KGS NGG+AA FDE+PY +L L+K+  KY  + P ++ D  GFGF
Sbjct: 689  LIVYNTTEQWDDLLSKGSGNGGIAAAFDEVPYTRLFLSKYCSKYAVIDPTFKTD--GFGF 746

Query: 527  VFPRGSHLTADVSRAILPVLE-EKLVQIETAWLGSEKAWSDQNKELRPNTLPLKKMW 360
             FP+GS L  DVSRA+L + E +K+ +IE+AW G +    D +  +  N+L LK  W
Sbjct: 747  AFPKGSPLVPDVSRAVLNITEGDKMTKIESAWFGKQSNCPDSSTSVTSNSLSLKSFW 803


>dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]
          Length = 908

 Score =  186 bits (473), Expect = 9e-45
 Identities = 117/302 (38%), Positives = 163/302 (53%), Gaps = 10/302 (3%)
 Frame = -3

Query: 1235 TITAKRSLSVDFSRPYTNGGIAMLVPKAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 1056
            TI A RS  VDF+ PYT  G+ M+VP   +  +   +F  P TW +W TS   F+ +  +
Sbjct: 490  TIVANRSQFVDFTLPYTESGVTMMVPIKDDNRDNTWVFLKPLTWELWLTSFCSFVFIGFV 549

Query: 1055 RWYFQAVIMYEIP-----KVGRIIFIVTTFFSSLLLEPFGTKVVDGLRTAPNFILKIFLA 891
             W  +  +  +       +VG I +    F  S ++     ++V  L     F+L I+  
Sbjct: 550  IWLLEHRVNEDFRGPFWHQVGMIFW----FSFSTMVFAQKERIVSNLA---RFVLIIW-- 600

Query: 890  PFCFFMIWIYCDLYMKNLND----DSGQLMAVDVKDLIRNGDYVGYQKDSLVEKVLMDLK 723
               F ++ I    Y  +L      +  Q    DVK+L+ + DYVGYQ  S V  +L  + 
Sbjct: 601  ---FLVLLILTSSYTASLTSMLTVEKLQPTVKDVKELLNSKDYVGYQPGSFVVGLLRKMN 657

Query: 722  FDESKLRVYDSLEEYEEALDKGSKNGGVAAIFDEMPYIKLLLTKFGYKYRTVGPIYQLDG 543
            FDE +L+ Y++ EE  E L KGS NGG+AA+FDE+PY+KL L  +  K+ T+GP Y+ D 
Sbjct: 658  FDEDRLKAYNTPEECVELLAKGSSNGGIAAVFDEIPYVKLFLANYCLKFTTIGPTYKTD- 716

Query: 542  FGFGFVFPRGSHLTADVSRAILPVLE-EKLVQIETAWLGSEKAWSDQNKELRPNTLPLKK 366
             GFGF FP GS L  DVSRA+L V E EK+VQIE AW G E   SD +  L  N+L L  
Sbjct: 717  -GFGFAFPIGSPLVPDVSRAVLNVTEGEKMVQIERAWFG-ESTCSDLSSSLSSNSLGLDS 774

Query: 365  MW 360
             W
Sbjct: 775  FW 776


>emb|CBI23997.3| unnamed protein product [Vitis vinifera]
          Length = 1316

 Score =  186 bits (473), Expect = 9e-45
 Identities = 116/300 (38%), Positives = 161/300 (53%), Gaps = 8/300 (2%)
 Frame = -3

Query: 1235 TITAKRSLSVDFSRPYTNGGIAMLVPKAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 1056
            TI A RS  VDF+ PYT  G++M+VP    KS    IF  P TWG+W TS   F+ +  +
Sbjct: 903  TIVANRSNYVDFTLPYTESGVSMIVPIKDNKSKRAWIFLKPLTWGLWVTSACFFVFIGFV 962

Query: 1055 RWYFQAVIMYEI--PKVGRIIFIVTTFFSSLLLEPFGTKVVDGLRTAPNFILKIFLAPFC 882
             W  +  I  +   P   +   I    FS+++      ++V  L     F++ I+     
Sbjct: 963  IWVLEHRINEDFRGPPSHQAGTIFWFSFSTMVFAQ-KERIVSNLA---RFVMIIW----- 1013

Query: 881  FFMIWIYCDLYMKNLND----DSGQLMAVDVKDLIRNGDYVGYQKDSLVEKVLMDLKFDE 714
            FF++ I    Y  +L         Q    D+K+L   G+YVGYQ+ S V   L  + FDE
Sbjct: 1014 FFVVLILTQSYTASLTSMLTVQQLQPTVTDIKELRAKGEYVGYQQGSFVLGFLKRMNFDE 1073

Query: 713  SKLRVYDSLEEYEEALDKGSKNGGVAAIFDEMPYIKLLLTKFGYKYRTVGPIYQLDGFGF 534
            SK R+Y+S E+  E L KGS NGG+AA FDE+PY+KL + +   KY  V P Y+ D  GF
Sbjct: 1074 SKFRIYNSSEKLAELLSKGSANGGIAAAFDEIPYMKLFIAQHCSKYTMVQPTYKYD--GF 1131

Query: 533  GFVFPRGSHLTADVSRAILPVLE-EKLVQIETAWLGSEKAWSDQN-KELRPNTLPLKKMW 360
            GF FPRGS L  DVSRA+L V E +++V+IE  W G + + SD N   +  N + L   W
Sbjct: 1132 GFAFPRGSPLVQDVSRAVLNVTEGDEMVKIEKEWFGKKTSCSDDNGSSISSNNISLDSFW 1191



 Score =  165 bits (418), Expect = 2e-38
 Identities = 109/302 (36%), Positives = 155/302 (51%), Gaps = 10/302 (3%)
 Frame = -3

Query: 1235 TITAKRSLSVDFSRPYTNGGIAMLVPKAYEKSNMF--MIFFAPFTWGVWFTSGALFISMV 1062
            TI A RSL VDF+ PYT  G++M+VP    +S      +F  P TW +W TS   F+ + 
Sbjct: 463  TILASRSLYVDFTLPYTESGVSMIVPIIDNRSKSVGAWVFLKPLTWDLWVTSACFFVFIG 522

Query: 1061 LLRWYFQAVIMYEI--PKVGRIIFIVTTFFSSLLLEPFGTKVVDGLRTAPNFILKIFLAP 888
            L+ W  +  I  +   P+  ++  I    FS+L+      ++V  L      IL      
Sbjct: 523  LVIWTLEHRINEDFRGPRSHQVGTIFWFSFSTLVFAQ-KERIVSNLARIVVIIL------ 575

Query: 887  FCFFMIWIYCDLYMKNLND----DSGQLMAVDVKDLIRNGDYVGYQKDSLV-EKVLMDLK 723
              FF++ I    Y  +L              D+ +LI+ G+ VGYQ  S V E ++  +K
Sbjct: 576  --FFVVLILTQTYTASLTSMLTVQQLNPTITDINELIKKGERVGYQYGSFVYEFLIKSMK 633

Query: 722  FDESKLRVYDSLEEYEEALDKGSKNGGVAAIFDEMPYIKLLLTKFGYKYRTVGPIYQLDG 543
            FDES L  Y+S EE +E   KG    G+ A FDE+PY+K+ L K+  KY  VGP Y+ D 
Sbjct: 634  FDESNLVKYESPEELDELFSKG----GITAAFDEIPYMKIFLAKYCSKYTAVGPTYKFD- 688

Query: 542  FGFGFVFPRGSHLTADVSRAILPVLE-EKLVQIETAWLGSEKAWSDQNKELRPNTLPLKK 366
             GFGFVF +GS L ADVSR +L V E  KL++ E AW G   +  +    +  N++ L  
Sbjct: 689  -GFGFVFRKGSPLVADVSRKVLSVTEGAKLLEFEKAWFGQTTSCPELTSSVSSNSIGLNS 747

Query: 365  MW 360
             W
Sbjct: 748  FW 749


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  186 bits (472), Expect = 1e-44
 Identities = 116/300 (38%), Positives = 160/300 (53%), Gaps = 8/300 (2%)
 Frame = -3

Query: 1235 TITAKRSLSVDFSRPYTNGGIAMLVPKAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 1056
            TI A RS  VDF+ PYT  G++M+VP    KS    IF  P TWG+W TS   F+ +  +
Sbjct: 547  TIVANRSNYVDFTLPYTESGVSMIVPIKDNKSKSAWIFLKPLTWGLWVTSACFFVFIGFV 606

Query: 1055 RWYFQAVIMYEI--PKVGRIIFIVTTFFSSLLLEPFGTKVVDGLRTAPNFILKIFLAPFC 882
             W  +  I  +   P   +   I    FS+++      ++V  L     F++ I+     
Sbjct: 607  IWVLEHRINEDFRGPPSHQAGTIFWFSFSTMVFAQ-KERIVSNLA---RFVMIIW----- 657

Query: 881  FFMIWIYCDLYMKNLND----DSGQLMAVDVKDLIRNGDYVGYQKDSLVEKVLMDLKFDE 714
            FF++ I    Y  +L         Q    D+K+L   G+YVGYQ+ S V   L  + FDE
Sbjct: 658  FFVVLILTQSYTASLTSMLTVQQLQPTVTDIKELRAKGEYVGYQQGSFVLGFLKRMNFDE 717

Query: 713  SKLRVYDSLEEYEEALDKGSKNGGVAAIFDEMPYIKLLLTKFGYKYRTVGPIYQLDGFGF 534
            SK R+Y+S E   E L KGS NGG+AA FDE+PY+KL + +   KY  V P Y+ D  GF
Sbjct: 718  SKFRIYNSSENLAELLSKGSANGGIAAAFDEIPYMKLFIAQHCSKYTMVQPTYKYD--GF 775

Query: 533  GFVFPRGSHLTADVSRAILPVLE-EKLVQIETAWLGSEKAWSDQN-KELRPNTLPLKKMW 360
            GF FPRGS L  DVSRA+L V E +++V+IE  W G + + SD N   +  N + L   W
Sbjct: 776  GFAFPRGSPLVQDVSRAVLNVTEGDEMVKIEKEWFGKKTSCSDDNGSSISSNNISLDSFW 835


>emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]
          Length = 978

 Score =  185 bits (470), Expect = 2e-44
 Identities = 116/300 (38%), Positives = 161/300 (53%), Gaps = 8/300 (2%)
 Frame = -3

Query: 1235 TITAKRSLSVDFSRPYTNGGIAMLVPKAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 1056
            TI A RS  VDF+ PYT  G++M+VP    KS    IF  P TW +W TS   F+ +  +
Sbjct: 548  TIVANRSKYVDFTLPYTESGVSMIVPIKDNKSKSAWIFLKPLTWDLWVTSACFFVFIGFV 607

Query: 1055 RWYFQAVIMYEI--PKVGRIIFIVTTFFSSLLLEPFGTKVVDGLRTAPNFILKIFLAPFC 882
             W  +  I  +   P   +   I    FS+++      ++V  L     F++ I+     
Sbjct: 608  IWVLEHRINEDFRGPHSHQAGTIFWFSFSTMVFAQ-KERIVSNLA---RFVMIIW----- 658

Query: 881  FFMIWIYCDLYMKNLND----DSGQLMAVDVKDLIRNGDYVGYQKDSLVEKVLMDLKFDE 714
            FF++ I    Y  +L         +    D+K+L   G+YVGYQ+DS V + L  +KFDE
Sbjct: 659  FFVLLILTQSYTASLTSMLTVQKLRPTVTDIKELQAKGEYVGYQQDSFVLEFLKRMKFDE 718

Query: 713  SKLRVYDSLEEYEEALDKGSKNGGVAAIFDEMPYIKLLLTKFGYKYRTVGPIYQLDGFGF 534
            SK R+Y+S E+  E L KGS NGG+AA FDE+PY+KL + +   KY  V P Y+ D  GF
Sbjct: 719  SKFRIYNSSEKLAELLSKGSANGGIAAAFDEIPYMKLFIAQHCSKYTMVQPTYKFD--GF 776

Query: 533  GFVFPRGSHLTADVSRAILPVLE-EKLVQIETAWLGSEKAWSDQN-KELRPNTLPLKKMW 360
            GF FPRGS L  DVSRA+L V E  ++V+IE  W G + + SD N      N + L   W
Sbjct: 777  GFAFPRGSPLVPDVSRAVLIVTEGNEMVKIEKKWFGEKTSCSDDNGSSPSSNNISLDSFW 836


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