BLASTX nr result

ID: Coptis23_contig00020292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020292
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266022.1| PREDICTED: thioredoxin M-type, chloroplastic...   244   2e-62
ref|NP_001237660.1| uncharacterized protein LOC100305596 [Glycin...   225   6e-57
ref|XP_002520245.1| thioredoxin m(mitochondrial)-type, putative ...   223   3e-56
gb|ABK95335.1| unknown [Populus trichocarpa]                          222   7e-56
ref|XP_002302199.1| thioredoxin m [Populus trichocarpa] gi|22284...   221   1e-55

>ref|XP_002266022.1| PREDICTED: thioredoxin M-type, chloroplastic [Vitis vinifera]
           gi|302142749|emb|CBI19952.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  244 bits (622), Expect = 2e-62
 Identities = 124/183 (67%), Positives = 146/183 (79%), Gaps = 5/183 (2%)
 Frame = +1

Query: 136 MALEICFQVSTISTPRACVVRAHQPLPSHAKLNLPTHKGLTKTYNLCFPNXXXXXXXN-- 309
           MALE CFQVST+S  RA V+++H P  +  KLNLPT KG+ K   L F +       +  
Sbjct: 1   MALENCFQVSTVSCARAGVLQSHHPFSAKEKLNLPTCKGV-KPSILSFSSSPSSLDYSFH 59

Query: 310 ---RGSQIVCKAREAVDQVLVVTDSNWETSVISSETPVLVEFWAPWCGPCRMIAPVVDEL 480
              R S+IVCKAREAVD+V VVTDS+W   VI+SE PVLVEFWAPWCGPCRMIAPV+DEL
Sbjct: 60  RICRKSRIVCKAREAVDEVQVVTDSSWSNVVIASENPVLVEFWAPWCGPCRMIAPVIDEL 119

Query: 481 AKEYAGKLACYKLNTDDCPIIASEYGIRSIPTVLFFKNGEKKESVIGAVPKSSLSATIEK 660
           AKEYAGK+ C K+NTDDCP IA++YGIRSIPTVLFFKNGE+KESVIGAVPKS+L+ATIEK
Sbjct: 120 AKEYAGKIVCCKVNTDDCPNIATQYGIRSIPTVLFFKNGERKESVIGAVPKSTLTATIEK 179

Query: 661 YLE 669
           Y++
Sbjct: 180 YVD 182


>ref|NP_001237660.1| uncharacterized protein LOC100305596 [Glycine max]
           gi|255626027|gb|ACU13358.1| unknown [Glycine max]
          Length = 181

 Score =  225 bits (574), Expect = 6e-57
 Identities = 114/182 (62%), Positives = 136/182 (74%), Gaps = 3/182 (1%)
 Frame = +1

Query: 136 MALEICFQVSTISTPRACVVRAHQPLPSHAKLNLPTHKGLTKTYN---LCFPNXXXXXXX 306
           MALE C +V+T+ T          P  S  KL  PTH+G  K+     L +P        
Sbjct: 1   MALENCLRVTTVGTATPQCFSPFFP-SSRDKLVFPTHRGFKKSLQNSTLSYPYLYSTGAA 59

Query: 307 NRGSQIVCKAREAVDQVLVVTDSNWETSVISSETPVLVEFWAPWCGPCRMIAPVVDELAK 486
            R S+ VC AREAV++V VVTDS+W   VI+SETPVLVEFWAPWCGPCRMIAP +DELAK
Sbjct: 60  YRKSRFVCNAREAVNEVKVVTDSSWNNLVIASETPVLVEFWAPWCGPCRMIAPAIDELAK 119

Query: 487 EYAGKLACYKLNTDDCPIIASEYGIRSIPTVLFFKNGEKKESVIGAVPKSSLSATIEKYL 666
           EYAGK+AC+KLNTDD P IA++YGIRSIPTVLFFKNGEKKES+IGAVPKS+LSAT+EKY+
Sbjct: 120 EYAGKIACFKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATVEKYV 179

Query: 667 EA 672
           ++
Sbjct: 180 DS 181


>ref|XP_002520245.1| thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
           gi|223540464|gb|EEF42031.1| thioredoxin
           m(mitochondrial)-type, putative [Ricinus communis]
          Length = 183

 Score =  223 bits (568), Expect = 3e-56
 Identities = 113/184 (61%), Positives = 146/184 (79%), Gaps = 5/184 (2%)
 Frame = +1

Query: 136 MALEICFQVSTISTPRACVVRAHQP----LPSHAK-LNLPTHKGLTKTYNLCFPNXXXXX 300
           MA++ CFQVST+S+ RA VV+        LP++ K LN+ ++  L+ + +   P      
Sbjct: 1   MAMKNCFQVSTVSSARAGVVQCFHVDKIYLPTYCKGLNI-SNLSLSSSASSSSPFFPHLR 59

Query: 301 XXNRGSQIVCKAREAVDQVLVVTDSNWETSVISSETPVLVEFWAPWCGPCRMIAPVVDEL 480
             ++ S+IVCKAREA+D+V  VTDS WE+ VI+SE PVLVEFWAPWCGPCRMIAPV++EL
Sbjct: 60  SRSQNSRIVCKAREALDEVQAVTDSGWESLVIASENPVLVEFWAPWCGPCRMIAPVINEL 119

Query: 481 AKEYAGKLACYKLNTDDCPIIASEYGIRSIPTVLFFKNGEKKESVIGAVPKSSLSATIEK 660
           AKEYAGK+AC+K+NTD+CP IA++YGIRSIPTVLFF  GEKKESVIGAVPK++LS+TIEK
Sbjct: 120 AKEYAGKIACFKVNTDECPNIANKYGIRSIPTVLFFNKGEKKESVIGAVPKTTLSSTIEK 179

Query: 661 YLEA 672
           Y++A
Sbjct: 180 YVDA 183


>gb|ABK95335.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  222 bits (565), Expect = 7e-56
 Identities = 113/182 (62%), Positives = 136/182 (74%), Gaps = 3/182 (1%)
 Frame = +1

Query: 136 MALEICFQVSTISTPRACVVRAHQPLPSHAKLNLPTHKGLTKTYNLCFPNXXXXXXX--- 306
           MAL     +ST+ST RA V+ ++    S  KL LPT +GL ++ +L FP+          
Sbjct: 1   MALHASMNMSTMSTTRAGVLCSNHVACSKEKLKLPTGRGLRRSSSLSFPSSFSSSYASVK 60

Query: 307 NRGSQIVCKAREAVDQVLVVTDSNWETSVISSETPVLVEFWAPWCGPCRMIAPVVDELAK 486
           N  S IVCKA+EAV  V VVTDS+W++ VI  E PVLVEFWAPWCGPCRMI PV+DELA 
Sbjct: 61  NHKSTIVCKAQEAVGVVQVVTDSSWDSLVIGCEIPVLVEFWAPWCGPCRMITPVIDELAA 120

Query: 487 EYAGKLACYKLNTDDCPIIASEYGIRSIPTVLFFKNGEKKESVIGAVPKSSLSATIEKYL 666
           EYAGK+AC+K+NTDDCP IAS+Y IRSIPTVL FKNGEKKE VIGAVPK++L+A IEKY+
Sbjct: 121 EYAGKIACFKVNTDDCPNIASQYAIRSIPTVLMFKNGEKKEGVIGAVPKATLAAAIEKYV 180

Query: 667 EA 672
           EA
Sbjct: 181 EA 182


>ref|XP_002302199.1| thioredoxin m [Populus trichocarpa] gi|222843925|gb|EEE81472.1|
           thioredoxin m [Populus trichocarpa]
          Length = 179

 Score =  221 bits (563), Expect = 1e-55
 Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 5/183 (2%)
 Frame = +1

Query: 136 MALEICFQVSTISTPRACVVRAHQPLPSHAKLNLPTHKGLTKTYNLCFPNXXXXXXXN-- 309
           MA++ CFQVS++ST RA V     P+    KL LPT KGL  T NL   +       +  
Sbjct: 1   MAMKNCFQVSSVSTTRAGVCHPFAPVE---KLQLPTSKGLN-TSNLLLSSPSSSFPPSLR 56

Query: 310 ---RGSQIVCKAREAVDQVLVVTDSNWETSVISSETPVLVEFWAPWCGPCRMIAPVVDEL 480
              + S+IVCKAREAVD V V TD++W+ +VI  +TPVLVEFWAPWCGPC+MIAPV++EL
Sbjct: 57  SRCQESRIVCKAREAVDAVQVATDASWD-AVIGGDTPVLVEFWAPWCGPCKMIAPVIEEL 115

Query: 481 AKEYAGKLACYKLNTDDCPIIASEYGIRSIPTVLFFKNGEKKESVIGAVPKSSLSATIEK 660
           A+EYAGK+ACYK+NTDDCP IA++YGIRSIPTVLFFK GEKKESVIGAVPK++LS++IEK
Sbjct: 116 AQEYAGKIACYKVNTDDCPSIATKYGIRSIPTVLFFKKGEKKESVIGAVPKTTLSSSIEK 175

Query: 661 YLE 669
           Y++
Sbjct: 176 YID 178


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