BLASTX nr result

ID: Coptis23_contig00020278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020278
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 hom...   293   2e-77
ref|XP_003556214.1| PREDICTED: Golgi to ER traffic protein 4 hom...   285   5e-75
ref|XP_002315277.1| predicted protein [Populus trichocarpa] gi|2...   284   9e-75
ref|NP_001239772.1| uncharacterized protein LOC100780059 [Glycin...   281   6e-74
ref|XP_002312037.1| predicted protein [Populus trichocarpa] gi|2...   279   3e-73

>ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 homolog [Vitis vinifera]
          Length = 322

 Score =  293 bits (750), Expect = 2e-77
 Identities = 140/192 (72%), Positives = 170/192 (88%)
 Frame = -1

Query: 576 MARERSKKGALPPSQETIDKLDKTVSDGNYYGAQQMYKTMTARYVSAERYAEALDILESG 397
           M R+RS+KG LPP+QE IDKL+KTV+DG+YYGAQQMYK+++ARY SAER  EALDILESG
Sbjct: 1   MLRQRSRKGPLPPAQEHIDKLEKTVNDGDYYGAQQMYKSISARYASAERCYEALDILESG 60

Query: 396 ACVQLKHGQVTCGAELAVLFVENLVKRKVPYNEETLDRVRKIYLEFPQISVPHHLGEEDD 217
           AC+QL+ GQVTCGAELA+LFVE LVK K PY++ TLDRVRKIY  FPQISVP  L ++DD
Sbjct: 61  ACIQLEKGQVTCGAELAILFVETLVKGKFPYDDNTLDRVRKIYKNFPQISVPQQLEDDDD 120

Query: 216 VQKLTEALGAAKIRVDGCSSFLKAAIRWSAQFGGPKNGSPELHTMLAEYIYSESPELDMA 37
           +QKL+EALGAAK RV+ CSSFLKAA++WSA+FG  + GSPE+H MLAEY+YSESPELDM+
Sbjct: 121 MQKLSEALGAAKTRVEVCSSFLKAAMKWSAEFGFHRQGSPEIHDMLAEYLYSESPELDMS 180

Query: 36  KVSVHFVRGNDP 1
           ++S+HFVRGN+P
Sbjct: 181 RISLHFVRGNNP 192


>ref|XP_003556214.1| PREDICTED: Golgi to ER traffic protein 4 homolog [Glycine max]
          Length = 323

 Score =  285 bits (729), Expect = 5e-75
 Identities = 132/192 (68%), Positives = 169/192 (88%)
 Frame = -1

Query: 576 MARERSKKGALPPSQETIDKLDKTVSDGNYYGAQQMYKTMTARYVSAERYAEALDILESG 397
           M+R+RS++  LPP+QE I+KL+K V+DGNYYGAQQMYK+++ARYVSA+RY+EALDIL SG
Sbjct: 1   MSRQRSRRAELPPAQENIEKLEKVVNDGNYYGAQQMYKSVSARYVSAQRYSEALDILHSG 60

Query: 396 ACVQLKHGQVTCGAELAVLFVENLVKRKVPYNEETLDRVRKIYLEFPQISVPHHLGEEDD 217
           AC+QL HGQVTCGAELA+LFVE L K K+PY+EE L+R++KIY  FP++S+P +L + DD
Sbjct: 61  ACIQLSHGQVTCGAELALLFVETLGKGKIPYDEEILERLKKIYKSFPRVSLPQNLWDVDD 120

Query: 216 VQKLTEALGAAKIRVDGCSSFLKAAIRWSAQFGGPKNGSPELHTMLAEYIYSESPELDMA 37
           +Q+L+E +G+AK RV+GCSSFLKAAI+WSA+ G   NGSPELH MLAEYI+SESPE+DMA
Sbjct: 121 MQQLSENIGSAKTRVEGCSSFLKAAIKWSAEHGANNNGSPELHIMLAEYIFSESPEVDMA 180

Query: 36  KVSVHFVRGNDP 1
           KV+ HFVRGN+P
Sbjct: 181 KVTYHFVRGNNP 192


>ref|XP_002315277.1| predicted protein [Populus trichocarpa] gi|222864317|gb|EEF01448.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  284 bits (727), Expect = 9e-75
 Identities = 132/192 (68%), Positives = 167/192 (86%)
 Frame = -1

Query: 576 MARERSKKGALPPSQETIDKLDKTVSDGNYYGAQQMYKTMTARYVSAERYAEALDILESG 397
           M+RER ++  LPP++E I KL+  +++GNYYGAQQMYK+++ARYVSA+R++EALDIL SG
Sbjct: 1   MSRERPRRATLPPAEENIKKLENVINEGNYYGAQQMYKSISARYVSAQRHSEALDILHSG 60

Query: 396 ACVQLKHGQVTCGAELAVLFVENLVKRKVPYNEETLDRVRKIYLEFPQISVPHHLGEEDD 217
           AC+QLK+GQVTCG+ELAV++VE LVK KVPY+++ LD +RKIY  FPQI +P  LGE++D
Sbjct: 61  ACLQLKNGQVTCGSELAVIYVETLVKAKVPYDDDVLDCIRKIYKTFPQIPLPQDLGEDED 120

Query: 216 VQKLTEALGAAKIRVDGCSSFLKAAIRWSAQFGGPKNGSPELHTMLAEYIYSESPELDMA 37
           +Q+L EALGAAKIRVD C SFLKAAI+WSA+FG  +NGSPELH MLAEY+YSESPELDM 
Sbjct: 121 MQQLNEALGAAKIRVDCCLSFLKAAIKWSAEFGAHRNGSPELHVMLAEYVYSESPELDMT 180

Query: 36  KVSVHFVRGNDP 1
           +VS HFVRGN+P
Sbjct: 181 RVSYHFVRGNNP 192


>ref|NP_001239772.1| uncharacterized protein LOC100780059 [Glycine max]
           gi|255636423|gb|ACU18550.1| unknown [Glycine max]
          Length = 323

 Score =  281 bits (720), Expect = 6e-74
 Identities = 134/192 (69%), Positives = 167/192 (86%)
 Frame = -1

Query: 576 MARERSKKGALPPSQETIDKLDKTVSDGNYYGAQQMYKTMTARYVSAERYAEALDILESG 397
           M+R+RS++  LPP+QE I+KL+K V+DGNYYGAQQMYK+++ARYVSA+RY EALDIL SG
Sbjct: 1   MSRQRSRRVELPPAQENIEKLEKVVNDGNYYGAQQMYKSVSARYVSAQRYCEALDILHSG 60

Query: 396 ACVQLKHGQVTCGAELAVLFVENLVKRKVPYNEETLDRVRKIYLEFPQISVPHHLGEEDD 217
           AC+QL HGQVTCGAELA+LFVE L K K+PYNEE L+R+ KIY  FP++S+P +L + DD
Sbjct: 61  ACIQLSHGQVTCGAELALLFVETLGKGKIPYNEEILERLDKIYKSFPRVSLPQNLWDVDD 120

Query: 216 VQKLTEALGAAKIRVDGCSSFLKAAIRWSAQFGGPKNGSPELHTMLAEYIYSESPELDMA 37
           +Q+L+E +G+AK RV+GCSSFLKAAI+WSA  G  KNGSPELH MLAEYI+SESPE+DMA
Sbjct: 121 MQQLSENIGSAKTRVEGCSSFLKAAIKWSAGNGVNKNGSPELHIMLAEYIFSESPEVDMA 180

Query: 36  KVSVHFVRGNDP 1
           KV+ HFVRGN+P
Sbjct: 181 KVTHHFVRGNNP 192


>ref|XP_002312037.1| predicted protein [Populus trichocarpa] gi|222851857|gb|EEE89404.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  279 bits (714), Expect = 3e-73
 Identities = 130/192 (67%), Positives = 165/192 (85%)
 Frame = -1

Query: 576 MARERSKKGALPPSQETIDKLDKTVSDGNYYGAQQMYKTMTARYVSAERYAEALDILESG 397
           M+R+R  K  LPP++  I+KL+  +++GNYYGAQQMYK+++ARYVSA+R++EALDIL SG
Sbjct: 1   MSRQRPGKAPLPPAEVNIEKLENVINEGNYYGAQQMYKSISARYVSAQRHSEALDILHSG 60

Query: 396 ACVQLKHGQVTCGAELAVLFVENLVKRKVPYNEETLDRVRKIYLEFPQISVPHHLGEEDD 217
           AC+QLK+ QVTCG+ELAV+FVE LVK KVPY+++ LDR+RKIY  FPQI +P  LGE+DD
Sbjct: 61  ACLQLKNSQVTCGSELAVIFVETLVKAKVPYDDDVLDRIRKIYKTFPQIPLPQDLGEDDD 120

Query: 216 VQKLTEALGAAKIRVDGCSSFLKAAIRWSAQFGGPKNGSPELHTMLAEYIYSESPELDMA 37
           +Q+L EALGAAK RV+ C SFLKAAI+WSA+FG  +NGSPE+H MLAEY+YSESPELDM 
Sbjct: 121 MQQLNEALGAAKTRVECCLSFLKAAIKWSAEFGAHRNGSPEIHFMLAEYVYSESPELDMT 180

Query: 36  KVSVHFVRGNDP 1
           +VS HFVRGN+P
Sbjct: 181 RVSYHFVRGNNP 192


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