BLASTX nr result

ID: Coptis23_contig00020271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020271
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531083.1| ATP binding protein, putative [Ricinus commu...   372   e-100
ref|XP_002265228.1| PREDICTED: uncharacterized protein LOC100246...   357   3e-96
ref|XP_002303066.1| predicted protein [Populus trichocarpa] gi|2...   356   1e-95
ref|XP_004149770.1| PREDICTED: uncharacterized protein LOC101208...   343   9e-92
gb|AFK38535.1| unknown [Medicago truncatula]                          323   9e-86

>ref|XP_002531083.1| ATP binding protein, putative [Ricinus communis]
            gi|223529329|gb|EEF31297.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 419

 Score =  372 bits (956), Expect = e-100
 Identities = 199/388 (51%), Positives = 250/388 (64%), Gaps = 7/388 (1%)
 Frame = -1

Query: 1356 VSSDSSETELLHLRRRKDYEEIMHGYDSFKARVQNLDEAKRKLLSYKPGDWTQEVGGMKI 1177
            +S  S E E    ++ K ++E++  YD  ++R ++LDEAK K+LSY PG W ++VGGMK+
Sbjct: 60   LSPTSLEVEANQRKKWKAFKELLQSYDQLRSRAESLDEAKSKILSYTPGGWKEKVGGMKL 119

Query: 1176 NNYDVPKTTSLILLGPRGSGKSSLVNRISRVFEDDSVTSERAQVSYNSSVGHGTLFLNEY 997
            ++Y+VPKTT+L+L+GPRGSGKSSLVNRIS+VF+DD    ERAQVSYN S G GT FL EY
Sbjct: 120  SDYNVPKTTTLLLVGPRGSGKSSLVNRISKVFDDDKFAPERAQVSYNPSAGEGTYFLQEY 179

Query: 996  MIPSGSTSFCLYDTRSLSENSCDNSEMIKSWMTKGVRHGELVLRDSDSSCVRKLMKCKAQ 817
            MIP  STSFCLYDTR   +NS DN EM+K WMT+GV HGEL +R  D S +R  MKCK +
Sbjct: 180  MIPGCSTSFCLYDTRGFFDNSYDNIEMLKYWMTRGVCHGELTVRKCDDSSLRTRMKCKVR 239

Query: 816  -KTCCSKDRRMVNFVILVVNAHSVLKSMSGEDDM--QYTRLLEETFSCLYLSCKDDKPVV 646
                 SK  R VNFVI VVN  +VLKSM  E +   QYT ++   F+C Y S KDDKPVV
Sbjct: 240  YNGSQSKKNRTVNFVIFVVNGLAVLKSMGSEVEKGNQYTDMIASAFNCPYASFKDDKPVV 299

Query: 645  VCTHGDILSHTDRARVRIHLGELLGIPPAKQIFDIPDKCDPETNLAVVDMLTYSLMHADK 466
            V THGD+LS +DR R+R+HLGELLGIPPAKQIFDIP+ CDP T L ++DML YSL HAD 
Sbjct: 300  VVTHGDLLSLSDRTRIRVHLGELLGIPPAKQIFDIPESCDPVTELTIIDMLRYSLEHADN 359

Query: 465  NLPGKT--RSPHKXXXXXXXXXXXXXXLFAFWSTYHSFKLGHWHATWHLW--RNSTASSE 298
            NLP  T     H+                          +G  +A  HL+        S 
Sbjct: 360  NLPQDTVAEKVHRV-------------------------IGSLYACVHLFIMLGIAILSI 394

Query: 297  SPETYHAIPKTESGEAIHIAWHEIRHIW 214
            + +  H  P+ +     H+AW  IRH+W
Sbjct: 395  NIQQMHREPEQD-----HVAWSSIRHLW 417


>ref|XP_002265228.1| PREDICTED: uncharacterized protein LOC100246086 [Vitis vinifera]
            gi|297741779|emb|CBI33051.3| unnamed protein product
            [Vitis vinifera]
          Length = 384

 Score =  357 bits (917), Expect = 3e-96
 Identities = 195/375 (52%), Positives = 242/375 (64%), Gaps = 5/375 (1%)
 Frame = -1

Query: 1323 HLRRRK-DYEEIMHGYDSFKARVQNLDEAKRKLLSYKPGDWTQEVGGMKINNYDVPKTTS 1147
            H RRR   Y +I+  YD  + R   L++AK ++LSY PG W +  GGMK ++Y+VP+TTS
Sbjct: 27   HQRRRSLVYSQILQSYDDVRIRTNALEKAKSRILSYTPGAWIEMSGGMKFSDYNVPETTS 86

Query: 1146 LILLGPRGSGKSSLVNRISRVFEDDSVTSERAQVSYNSSVGHGTLFLNEYMIPSGSTSFC 967
            LIL+GP+GSGKSSL+N+ISRVFEDD    ERAQVSYN SVG GT FL EYMIP GSTSFC
Sbjct: 87   LILVGPKGSGKSSLINKISRVFEDDKFAPERAQVSYNLSVGDGTYFLQEYMIPRGSTSFC 146

Query: 966  LYDTRSLSENSCDNSEMIKSWMTKGVRHGELVLRDSDSSCVRKLMKCKAQKTCCSKDR-R 790
            LYDTR LS+ S DN +M+K W+TKGVRHGEL +R+SDS  +R  MKCKA+++  +  + R
Sbjct: 147  LYDTRGLSDVSSDNMQMLKHWITKGVRHGELAIRNSDSPSIRARMKCKARQSGYNSSKTR 206

Query: 789  MVNFVILVVNAHSVLKSMSGEDD---MQYTRLLEETFSCLYLSCKDDKPVVVCTHGDILS 619
            +VNFVI VVN  SVLKS+   DD     Y + + E F C YLS +DD PVVV THGD+LS
Sbjct: 207  LVNFVIFVVNGLSVLKSIDSCDDGASQFYIQTIAEMFCCPYLSFRDDMPVVVVTHGDLLS 266

Query: 618  HTDRARVRIHLGELLGIPPAKQIFDIPDKCDPETNLAVVDMLTYSLMHADKNLPGKTRSP 439
             +DRARVR+HLGE LGI P KQIFDIP+ C   T L ++DML YSL HAD+NLP K    
Sbjct: 267  LSDRARVRVHLGEHLGISPGKQIFDIPESCGKATELTIIDMLRYSLEHADRNLPCKGWFL 326

Query: 438  HKXXXXXXXXXXXXXXLFAFWSTYHSFKLGHWHATWHLWRNSTASSESPETYHAIPKTES 259
             K              L   W +          A+ H++R     +      H    T+ 
Sbjct: 327  DK--GRVVPLMACIFLLIILWLSV---------ASTHIYRVHMRRA------HPKVHTDF 369

Query: 258  GEAIHIAWHEIRHIW 214
                HI WH IRH+W
Sbjct: 370  PPEFHIDWHAIRHLW 384


>ref|XP_002303066.1| predicted protein [Populus trichocarpa] gi|222844792|gb|EEE82339.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  356 bits (913), Expect = 1e-95
 Identities = 176/293 (60%), Positives = 222/293 (75%), Gaps = 3/293 (1%)
 Frame = -1

Query: 1302 YEEIMHGYDSFKARVQNLDEAKRKLLSYKPGDWTQEVGGMKINNYDVPKTTSLILLGPRG 1123
            Y E++  YD  K R ++L+E K K+LSY PG W + V GMK++++DVP TT L+++GP+G
Sbjct: 106  YREVLQSYDQLKDRSKSLEEGKSKILSYTPGGWMENVIGMKLSDFDVPNTTVLLVIGPKG 165

Query: 1122 SGKSSLVNRISRVFEDDSVTSERAQVSYNSSVGHGTLFLNEYMIPSGSTSFCLYDTRSLS 943
            SGKSSL+NRIS+VFEDD   SERAQVSYNSS   GT FL EYMIP  S+SFCLYDTR LS
Sbjct: 166  SGKSSLINRISKVFEDDKFASERAQVSYNSSAADGTYFLQEYMIPRSSSSFCLYDTRGLS 225

Query: 942  ENSCDNSEMIKSWMTKGVRHGELVLRDSDSSCVRKLMKCKAQ-KTCCSKDRRMVNFVILV 766
             +S D++ M+K+W+TKGV H EL++R SD+S +R  MKCKA+   C SK+ RMV FVI V
Sbjct: 226  YDSYDSANMLKNWITKGVHHRELIIRPSDNSHLRNQMKCKARGNGCQSKETRMVTFVIFV 285

Query: 765  VNAHSVLKSMSG--EDDMQYTRLLEETFSCLYLSCKDDKPVVVCTHGDILSHTDRARVRI 592
            V+  +VLKSM    ++  +YT+++ +TF C Y+S  DDKPVVV THGD+LS  DRARVR+
Sbjct: 286  VDGLAVLKSMDNLVDEGKKYTQMIAKTFDCPYISFNDDKPVVVVTHGDLLSLNDRARVRV 345

Query: 591  HLGELLGIPPAKQIFDIPDKCDPETNLAVVDMLTYSLMHADKNLPGKTRSPHK 433
            HLGELLGIPPAKQIFDIP+  DP T L +V+ML YSL HADKNLP K +   K
Sbjct: 346  HLGELLGIPPAKQIFDIPESHDPVTELTIVNMLHYSLEHADKNLPHKRQIAKK 398


>ref|XP_004149770.1| PREDICTED: uncharacterized protein LOC101208586 [Cucumis sativus]
            gi|449520910|ref|XP_004167475.1| PREDICTED:
            uncharacterized protein LOC101225331 [Cucumis sativus]
          Length = 436

 Score =  343 bits (879), Expect = 9e-92
 Identities = 172/303 (56%), Positives = 224/303 (73%), Gaps = 2/303 (0%)
 Frame = -1

Query: 1353 SSDSSETELLHLRRRKDYEEIMHGYDSFKARVQNLDEAKRKLLSYKPGDWTQEVGGMKIN 1174
            SS + + ++  +RR + + EI+  YD  + R +NL++AK+K+LSY PG W ++VGGMK++
Sbjct: 71   SSAALDVDICRMRRNRVHREIIESYDQLRIRSENLNQAKQKILSYSPGAWIEQVGGMKLS 130

Query: 1173 NYDVPKTTSLILLGPRGSGKSSLVNRISRVFEDDSVTSERAQVSYNSSVGHGTLFLNEYM 994
            +YD+P+TTSLIL+GP+GSGKSSL+NRIS+VFE+D    ERAQVS NSS   GT FL+EYM
Sbjct: 131  DYDIPQTTSLILIGPKGSGKSSLINRISKVFEEDHFAPERAQVSCNSSGEDGTFFLHEYM 190

Query: 993  IPSGSTSFCLYDTRSLSENSCDNSEMIKSWMTKGVRHGELVLRDSDSSCVRKLMKCKAQK 814
            I   S SFCLYDTR LS +  DN EM+K WM+KGV HG+LV R SD+S +   M+CKA++
Sbjct: 191  ILRKSKSFCLYDTRGLSNDPSDNIEMLKQWMSKGVHHGKLVTRKSDASSLINRMRCKARQ 250

Query: 813  TC-CSKDRRMVNFVILVVNAHSVLKSMSGEDDMQ-YTRLLEETFSCLYLSCKDDKPVVVC 640
            +   S+  R++NFVI VV+  SVLKS+ G+D  + Y R++   F+C YLS  DDKPVVV 
Sbjct: 251  SFPRSRVVRIINFVIFVVDGLSVLKSIDGDDKQKDYDRVITTAFNCPYLSYGDDKPVVVL 310

Query: 639  THGDILSHTDRARVRIHLGELLGIPPAKQIFDIPDKCDPETNLAVVDMLTYSLMHADKNL 460
            THGD+LS  +  RVR HLG LLGIP  KQIFDIPD+ DP T L ++DML Y L HADKNL
Sbjct: 311  THGDLLSFAENVRVRGHLGNLLGIPSTKQIFDIPDRYDPVTELTIIDMLHYCLEHADKNL 370

Query: 459  PGK 451
            P K
Sbjct: 371  PPK 373


>gb|AFK38535.1| unknown [Medicago truncatula]
          Length = 474

 Score =  323 bits (827), Expect = 9e-86
 Identities = 172/332 (51%), Positives = 230/332 (69%), Gaps = 5/332 (1%)
 Frame = -1

Query: 1413 DHTTREFFDANEGFIDKTWVSSDSSETELLHLRRRKD-YEEIMHGYDSFKARVQNLDEAK 1237
            D++  E  + + G + +  V++ S+   ++  R+R   Y+EI+  YD+ K   +NL EAK
Sbjct: 43   DNSVNEKNELDFGEVSEESVATSSAADSVIGERKRLGIYQEILQSYDALKIDSKNLKEAK 102

Query: 1236 RKLLSYKPGDWTQEVGGMKINNYDVPKTTSLILLGPRGSGKSSLVNRISRVFEDDSVTSE 1057
             K+LSY+PG WT++  G+K+ +YDVP+TT L+L+GP GSGKSSL+NRIS+VF++D     
Sbjct: 103  EKILSYRPGTWTEKAKGLKLCDYDVPETTCLLLVGPSGSGKSSLINRISKVFDEDKFAPA 162

Query: 1056 RAQVSYNSSVGHGTLFLNEYMIPSGSTSFCLYDTRSLSENSCDNSEMIKSWMTKGVRHGE 877
            RAQVSYNS  G+GT FL EYMIP  S S CLYDTRSLS++S +N++M+K+WMTKGVRHGE
Sbjct: 163  RAQVSYNSIRGNGTCFLREYMIPRDSNSICLYDTRSLSDDSHENNKMLKNWMTKGVRHGE 222

Query: 876  LVLRDSDSSCVRKLMKCKA-QKTCCSKDRRMVNFVILVVNAHSVL---KSMSGEDDMQYT 709
            LV R  D   + K +K K  +K   S   R VN+VI V+N  SVL   ++  G  +  Y 
Sbjct: 223  LVARGMDDKRLSKNLKLKGDKKGFFSSKSRKVNYVICVLNGLSVLNVIENAGGALEEWYI 282

Query: 708  RLLEETFSCLYLSCKDDKPVVVCTHGDILSHTDRARVRIHLGELLGIPPAKQIFDIPDKC 529
            + +  TF+C +LS KDDKPV+V THGD+LS +DRARVR +LGELLGIPP KQIFDIPD  
Sbjct: 283  QQIVSTFNCPFLSFKDDKPVLVLTHGDLLSLSDRARVRAYLGELLGIPPTKQIFDIPDCD 342

Query: 528  DPETNLAVVDMLTYSLMHADKNLPGKTRSPHK 433
            D  T  A+V ML Y+L HAD N P K+   +K
Sbjct: 343  DLVTESAIVGMLRYTLEHADGNFPQKSNVMNK 374


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