BLASTX nr result

ID: Coptis23_contig00020246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020246
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244...   135   5e-30
ref|XP_002874600.1| hypothetical protein ARALYDRAFT_911277 [Arab...   129   2e-28
ref|NP_567349.1| thioredoxin family protein [Arabidopsis thalian...   129   3e-28
dbj|BAH19637.1| AT4G10000 [Arabidopsis thaliana]                      129   3e-28
emb|CAB39624.1| putative protein [Arabidopsis thaliana] gi|72676...   129   3e-28

>ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244724 [Vitis vinifera]
           gi|297741048|emb|CBI31360.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  135 bits (339), Expect = 5e-30
 Identities = 67/97 (69%), Positives = 77/97 (79%)
 Frame = -2

Query: 291 TENQQSTSFLSLLCPLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGTRSIYGNSPDP 112
           T    STSFLS+LCPLLK+F+A DPSQERN  LEVATSSLS+L+RFPWG+RS+  +S   
Sbjct: 82  TGTTPSTSFLSVLCPLLKLFSAGDPSQERNYLLEVATSSLSTLSRFPWGSRSLSDSSQSE 141

Query: 111 EIAAEYPQVHLQLFEFEACPFCRRVREALTELDLSVQ 1
           E     P   LQLFEFEACPFCRRVREA+TELDLSV+
Sbjct: 142 EATTVDPPTRLQLFEFEACPFCRRVREAITELDLSVE 178


>ref|XP_002874600.1| hypothetical protein ARALYDRAFT_911277 [Arabidopsis lyrata subsp.
           lyrata] gi|297320437|gb|EFH50859.1| hypothetical protein
           ARALYDRAFT_911277 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  129 bits (324), Expect = 2e-28
 Identities = 72/143 (50%), Positives = 98/143 (68%), Gaps = 5/143 (3%)
 Frame = -2

Query: 414 FPSCKLYCFPNKKSKN-----HYKIVAAKSSNSEENGHLKTAPLLETENQQSTSFLSLLC 250
           F S + + F N+ S N       + ++ KSSNSE   +  +    ++ +  ++SFLS LC
Sbjct: 22  FHSHRPHRFSNRISGNGSWVRERRRLSVKSSNSEAKSNESSQ---KSSSNNTSSFLSFLC 78

Query: 249 PLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGTRSIYGNSPDPEIAAEYPQVHLQLF 70
           PLLKVF+  DPSQ RN  LEVATSSL+S+AR PWG+R   G+  + ++++  P + LQLF
Sbjct: 79  PLLKVFSGGDPSQRRNHALEVATSSLASVARLPWGSRVSTGSIDNQDVSSN-PPLRLQLF 137

Query: 69  EFEACPFCRRVREALTELDLSVQ 1
           EFEACPFCRRVREA+TELDLSV+
Sbjct: 138 EFEACPFCRRVREAMTELDLSVE 160


>ref|NP_567349.1| thioredoxin family protein [Arabidopsis thaliana]
           gi|30681283|ref|NP_849353.1| thioredoxin family protein
           [Arabidopsis thaliana] gi|332657427|gb|AEE82827.1|
           thioredoxin family protein [Arabidopsis thaliana]
           gi|332657428|gb|AEE82828.1| thioredoxin family protein
           [Arabidopsis thaliana]
          Length = 333

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 7/151 (4%)
 Frame = -2

Query: 432 CQVSFHFPSCKLYC--FPNKKSKN-----HYKIVAAKSSNSEENGHLKTAPLLETENQQS 274
           C  +  FPS  ++   F  + S N       + +  KSSNSE     K     ++ +  +
Sbjct: 11  CHPTASFPSSMVHSNRFSKRISGNGNWVRERRRLYVKSSNSEGK---KEEAAQKSSSNNT 67

Query: 273 TSFLSLLCPLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGTRSIYGNSPDPEIAAEY 94
           +SFLS LCPLLKVF+  DPSQ+RN  LEVATSSL+S+AR PWG+R   G+  + ++++  
Sbjct: 68  SSFLSFLCPLLKVFSGGDPSQQRNHALEVATSSLASVARLPWGSRVSTGSIDNQDVSSN- 126

Query: 93  PQVHLQLFEFEACPFCRRVREALTELDLSVQ 1
           P + LQLFEFEACPFCRRVREA+TELDLSV+
Sbjct: 127 PPLRLQLFEFEACPFCRRVREAMTELDLSVE 157


>dbj|BAH19637.1| AT4G10000 [Arabidopsis thaliana]
          Length = 333

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 7/151 (4%)
 Frame = -2

Query: 432 CQVSFHFPSCKLYC--FPNKKSKN-----HYKIVAAKSSNSEENGHLKTAPLLETENQQS 274
           C  +  FPS  ++   F  + S N       + +  KSSNSE     K     ++ +  +
Sbjct: 11  CHPTASFPSSMVHSNRFSKRISGNGNWVRERRRLYVKSSNSEGK---KEEAAQKSSSNNT 67

Query: 273 TSFLSLLCPLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGTRSIYGNSPDPEIAAEY 94
           +SFLS LCPLLKVF+  DPSQ+RN  LEVATSSL+S+AR PWG+R   G+  + ++++  
Sbjct: 68  SSFLSFLCPLLKVFSGGDPSQQRNHALEVATSSLASVARLPWGSRVSTGSIDNQDVSSN- 126

Query: 93  PQVHLQLFEFEACPFCRRVREALTELDLSVQ 1
           P + LQLFEFEACPFCRRVREA+TELDLSV+
Sbjct: 127 PPLRLQLFEFEACPFCRRVREAMTELDLSVE 157


>emb|CAB39624.1| putative protein [Arabidopsis thaliana] gi|7267696|emb|CAB78123.1|
           putative protein [Arabidopsis thaliana]
          Length = 327

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 7/151 (4%)
 Frame = -2

Query: 432 CQVSFHFPSCKLYC--FPNKKSKN-----HYKIVAAKSSNSEENGHLKTAPLLETENQQS 274
           C  +  FPS  ++   F  + S N       + +  KSSNSE     K     ++ +  +
Sbjct: 11  CHPTASFPSSMVHSNRFSKRISGNGNWVRERRRLYVKSSNSEGK---KEEAAQKSSSNNT 67

Query: 273 TSFLSLLCPLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGTRSIYGNSPDPEIAAEY 94
           +SFLS LCPLLKVF+  DPSQ+RN  LEVATSSL+S+AR PWG+R   G+  + ++++  
Sbjct: 68  SSFLSFLCPLLKVFSGGDPSQQRNHALEVATSSLASVARLPWGSRVSTGSIDNQDVSSN- 126

Query: 93  PQVHLQLFEFEACPFCRRVREALTELDLSVQ 1
           P + LQLFEFEACPFCRRVREA+TELDLSV+
Sbjct: 127 PPLRLQLFEFEACPFCRRVREAMTELDLSVE 157


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