BLASTX nr result

ID: Coptis23_contig00020245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020245
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62229.1| hypothetical protein VITISV_010990 [Vitis vinifera]    46   1e-08
emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]    46   2e-08
emb|CAN73460.1| hypothetical protein VITISV_033905 [Vitis vinifera]    44   3e-08
emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]    45   3e-08
emb|CAN70399.1| hypothetical protein VITISV_023214 [Vitis vinifera]    42   3e-08

>emb|CAN62229.1| hypothetical protein VITISV_010990 [Vitis vinifera]
          Length = 1404

 Score = 46.2 bits (108), Expect(2) = 1e-08
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 26/95 (27%)
 Frame = +2

Query: 140  VNSSLLSKWIW---CD*RQVW----VRRNGLVQYG-----------CSLWKGIMKYK--- 256
            +N +LL KWIW   C+    W      + G   YG             +WK IMK     
Sbjct: 1230 LNRALLGKWIWRFACEKNNFWNQVITTKYGQEDYGWRPKKVSGAAGVGVWKEIMKESDWC 1289

Query: 257  -----YVSSYERETILFWEDRWCSKIPLKVCFKEL 346
                 ++   +   I FW+DRWC+ IPL  CF +L
Sbjct: 1290 WENLAFIVG-KGSKIKFWKDRWCTDIPLSQCFNQL 1323



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 1    LSLLIIPISVAEVLKKMMRDFLWGTTNDAQRYHLIVW 111
            LS+  +P SVA+ ++K  RDFLWG  N   + HL+ W
Sbjct: 1174 LSIFRMPKSVAKRVEKTQRDFLWGGGNLEGKVHLVKW 1210


>emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]
          Length = 1856

 Score = 45.8 bits (107), Expect(2) = 2e-08
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 26/95 (27%)
 Frame = +2

Query: 140  VNSSLLSKWIW---CD*RQVW----VRRNGLVQYG-----------CSLWKGIMKYK--- 256
            +N +LL KWIW   C+    W      + G   YG             +WK IMK     
Sbjct: 1730 LNRALLGKWIWRFACEKNNFWNQVITTKYGQEDYGWRPKKVSGAAGVXVWKEIMKESDWC 1789

Query: 257  -----YVSSYERETILFWEDRWCSKIPLKVCFKEL 346
                 ++   +   I FW+DRWC+ IPL  CF +L
Sbjct: 1790 WENLAFIVG-KGSKIKFWKDRWCTDIPLSQCFNQL 1823



 Score = 37.7 bits (86), Expect(2) = 2e-08
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 1    LSLLIIPISVAEVLKKMMRDFLWGTTNDAQRYHLIVW 111
            LS+  +P SVA+ ++K  RDFLWG  N   + HL+ W
Sbjct: 1674 LSIFRMPKSVAKRVEKTQRDFLWGGGNLEGKVHLVKW 1710


>emb|CAN73460.1| hypothetical protein VITISV_033905 [Vitis vinifera]
          Length = 735

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 26/95 (27%)
 Frame = +2

Query: 140 VNSSLLSKWIW---CD*RQVW----VRRNGLVQYG-----------CSLWKGIMKYK--- 256
           +N +LL KWIW   C+    W      + G   YG             +WK IMK     
Sbjct: 215 LNRALLGKWIWRFACEKNNFWNQVITTKYGQEDYGWRPKKVRGAAGAGVWKEIMKESDWC 274

Query: 257 -----YVSSYERETILFWEDRWCSKIPLKVCFKEL 346
                +V   +   I FW+DRWC+ IPL  C  +L
Sbjct: 275 WENLAFVVG-KGSKIKFWKDRWCTDIPLSQCXNQL 308



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 1   LSLLIIPISVAEVLKKMMRDFLWGTTNDAQRYHLIVW 111
           LS+  +P SVA+ ++K  RDFLWG  N   + HL+ W
Sbjct: 159 LSIFCMPKSVAKRVEKSQRDFLWGGGNLEGKVHLVKW 195


>emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]
          Length = 1168

 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 25/94 (26%)
 Frame = +2

Query: 140  VNSSLLSKWIW---CD*RQVWVR----RNGLVQYG-----------CSLWKGIMK----- 250
            +N +LL KWIW   C+   +W +    + G   YG             +WK IMK     
Sbjct: 822  LNRALLGKWIWRFACERDNLWKQVISTKYGQEDYGWRAKKVSGAAGVGVWKEIMKESDWC 881

Query: 251  YKYVSSY--ERETILFWEDRWCSKIPLKVCFKEL 346
            ++ +S    +   I FW+DRWC+  PL  CF  L
Sbjct: 882  WENLSFLVGKGSKIKFWKDRWCTDTPLSQCFNHL 915



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 1   LSLLIIPISVAEVLKKMMRDFLWGTTNDAQRYHLIVW 111
           +S+  +P SVA  ++K+ RDFLWG  N   + HL+ W
Sbjct: 766 MSIFRMPKSVARRVEKIQRDFLWGGGNLGGKIHLVKW 802


>emb|CAN70399.1| hypothetical protein VITISV_023214 [Vitis vinifera]
          Length = 844

 Score = 42.0 bits (97), Expect(2) = 3e-08
 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 25/94 (26%)
 Frame = +2

Query: 140  VNSSLLSKWIWC------------------D*RQVWVRRNGLVQYGCSLWKGI-MKYKYV 262
            +N +LL+KW W                   + R  W  R     +G  LWKGI M +K V
Sbjct: 737  LNKALLAKWNWRFANERKALWNQVIRGKYGEDRGGWCSREVREAHGMGLWKGIRMDWKLV 796

Query: 263  SSY------ERETILFWEDRWCSKIPLKVCFKEL 346
            S+           + FW DRWC   PL + F  L
Sbjct: 797  SNRLAFIVGNGRRVSFWRDRWCXDSPLCMSFPSL 830



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = +1

Query: 1   LSLLIIPISVAEVLKKMMRDFLWGTTNDAQRYHLIVW 111
           +SLL +P SV   L+K+ RDFLWG  N  ++ HL+ W
Sbjct: 681 MSLLCLPSSVRRRLEKIQRDFLWGGGNLERKPHLVRW 717


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