BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020234
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...   270   3e-70
dbj|BAK07935.1| predicted protein [Hordeum vulgare subsp. vulgare]    249   5e-64
ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   248   2e-63
ref|NP_001061429.2| Os08g0274700 [Oryza sativa Japonica Group] g...   247   2e-63
gb|EAZ42139.1| hypothetical protein OsJ_26699 [Oryza sativa Japo...   247   2e-63

>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  270 bits (690), Expect = 3e-70
 Identities = 137/186 (73%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
 Frame = -3

Query: 718 MASYYXXXXXXXXXXXISTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHELHLRQ 539
           MA YY           +S VFQ  ANGVG+LDP AE N VEQG+KVELPFWLAHEL  RQ
Sbjct: 1   MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQ 60

Query: 538 AVAVTVPPCFNQKTRKEIQADAACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTG 359
           AV + VP CFNQKTRKEIQADA CVDL+SRC YFYELGCKVAPL+GDRTIGS LL AF  
Sbjct: 61  AVTIHVPACFNQKTRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAFLS 120

Query: 358 RYKEVLSKAHSAAFIMAPKFLTLLTKEETRLYEAARSSMTAFKKWRVGGPRFERASIL-R 182
           RYKEVLSKAH+AA    PK LTLLTKEET LYE A+SSM AFKKWR+GGPRF+RAS+L R
Sbjct: 121 RYKEVLSKAHTAASTPVPKVLTLLTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVLGR 180

Query: 181 KRKPTD 164
           KRKPTD
Sbjct: 181 KRKPTD 186


>dbj|BAK07935.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 194

 Score =  249 bits (636), Expect = 5e-64
 Identities = 123/184 (66%), Positives = 146/184 (79%), Gaps = 2/184 (1%)
 Frame = -3

Query: 718 MASYYXXXXXXXXXXXISTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHE-LHLR 542
           M  YY           IS VFQ+ ANGVGMLDPGAERN VE+GAKV+LPFWLAH  L L 
Sbjct: 1   MPCYYDVNDILMEEELISVVFQVTANGVGMLDPGAERNTVEKGAKVDLPFWLAHGMLSLE 60

Query: 541 QAVAVTVPPCFNQKTRKEIQADAACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFT 362
           QAV++ VPPCF QKTRKEIQADAACVDL+ RC YFYELGCK+ PL+GD++IG FL YAFT
Sbjct: 61  QAVSINVPPCFTQKTRKEIQADAACVDLRVRCPYFYELGCKIVPLVGDKSIGQFLRYAFT 120

Query: 361 GRYKEVLSKAHSAAFIMAPKFLTLLTKEETRLYEAARSSMTAFKKWRVGGPRFERASIL- 185
            RYKE+LSKAHS++ +  PKF T LTKEE +++E+AR SM++F+KWRVGG R ++ASIL 
Sbjct: 121 SRYKEILSKAHSSSTMTVPKFATRLTKEEAQVFESARESMSSFRKWRVGGARLQKASILG 180

Query: 184 RKRK 173
           RKRK
Sbjct: 181 RKRK 184


>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  248 bits (632), Expect = 2e-63
 Identities = 120/186 (64%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
 Frame = -3

Query: 718 MASYYXXXXXXXXXXXISTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHELHLRQ 539
           MA+YY           +S +FQ  A+GVG++DP +E + +E G+KVELPFWLAHEL LRQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 538 AVAVTVPPCFNQKTRKEIQADAACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTG 359
           AV+V VPPCFNQKTR EIQAD ACVDL+SRC YFYE GCK+AP++GDRTIG  LL AF  
Sbjct: 61  AVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120

Query: 358 RYKEVLSKAHSAAFIMAPKFLTLLTKEETRLYEAARSSMTAFKKWRVGGPRFERASIL-R 182
           RYKEVL+KAH+AA     KF T+LT EE  LYE A+S+M +FKKWR+GGPRF+ ASIL R
Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180

Query: 181 KRKPTD 164
           KRKPT+
Sbjct: 181 KRKPTE 186


>ref|NP_001061429.2| Os08g0274700 [Oryza sativa Japonica Group]
           gi|255678312|dbj|BAF23343.2| Os08g0274700, partial
           [Oryza sativa Japonica Group]
          Length = 203

 Score =  247 bits (631), Expect = 2e-63
 Identities = 122/184 (66%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
 Frame = -3

Query: 718 MASYYXXXXXXXXXXXISTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHEL-HLR 542
           M  YY           IS VFQ+ ANGVG+LDPGAERN VE+GAKV+LPFWLAH L  L 
Sbjct: 10  MPGYYDIDDILMEEEPISVVFQVSANGVGLLDPGAERNSVEKGAKVDLPFWLAHGLLSLE 69

Query: 541 QAVAVTVPPCFNQKTRKEIQADAACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFT 362
           QAV++ VPPCF QKTRKEIQADAACVDL+ RC YFYELGCK+ PL+ DR+IG FL YAFT
Sbjct: 70  QAVSINVPPCFTQKTRKEIQADAACVDLRIRCPYFYELGCKIVPLVNDRSIGLFLRYAFT 129

Query: 361 GRYKEVLSKAHSAAFIMAPKFLTLLTKEETRLYEAARSSMTAFKKWRVGGPRFERASIL- 185
            RYKE+LSK+HS++ +  PKF+  LTKEE +++E+AR SMTAFKKWR GG R ++ASIL 
Sbjct: 130 SRYKEILSKSHSSSMMTVPKFVPRLTKEEAQVFESARDSMTAFKKWRAGGVRLQKASILG 189

Query: 184 RKRK 173
           RKRK
Sbjct: 190 RKRK 193


>gb|EAZ42139.1| hypothetical protein OsJ_26699 [Oryza sativa Japonica Group]
           gi|215767849|dbj|BAH00078.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 194

 Score =  247 bits (631), Expect = 2e-63
 Identities = 122/184 (66%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
 Frame = -3

Query: 718 MASYYXXXXXXXXXXXISTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHEL-HLR 542
           M  YY           IS VFQ+ ANGVG+LDPGAERN VE+GAKV+LPFWLAH L  L 
Sbjct: 1   MPGYYDIDDILMEEEPISVVFQVSANGVGLLDPGAERNSVEKGAKVDLPFWLAHGLLSLE 60

Query: 541 QAVAVTVPPCFNQKTRKEIQADAACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFT 362
           QAV++ VPPCF QKTRKEIQADAACVDL+ RC YFYELGCK+ PL+ DR+IG FL YAFT
Sbjct: 61  QAVSINVPPCFTQKTRKEIQADAACVDLRIRCPYFYELGCKIVPLVNDRSIGLFLRYAFT 120

Query: 361 GRYKEVLSKAHSAAFIMAPKFLTLLTKEETRLYEAARSSMTAFKKWRVGGPRFERASIL- 185
            RYKE+LSK+HS++ +  PKF+  LTKEE +++E+AR SMTAFKKWR GG R ++ASIL 
Sbjct: 121 SRYKEILSKSHSSSMMTVPKFVPRLTKEEAQVFESARDSMTAFKKWRAGGVRLQKASILG 180

Query: 184 RKRK 173
           RKRK
Sbjct: 181 RKRK 184