BLASTX nr result

ID: Coptis23_contig00020228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020228
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254...   353   5e-95
ref|XP_002519663.1| conserved hypothetical protein [Ricinus comm...   340   3e-91
ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|2...   339   6e-91
ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791...   336   5e-90
ref|XP_002890852.1| hypothetical protein ARALYDRAFT_473232 [Arab...   333   4e-89

>ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254825 [Vitis vinifera]
           gi|147866339|emb|CAN79921.1| hypothetical protein
           VITISV_002110 [Vitis vinifera]
           gi|297740736|emb|CBI30918.3| unnamed protein product
           [Vitis vinifera]
          Length = 318

 Score =  353 bits (905), Expect = 5e-95
 Identities = 170/283 (60%), Positives = 208/283 (73%), Gaps = 1/283 (0%)
 Frame = +1

Query: 151 SKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYAXXXXXXXXXXXXSSFFENHLSAQ 330
           S    G++P +  Y+G+V+HER+RPV H+FRY VRYA             +   +HLS  
Sbjct: 41  SSAATGEDP-VSLYEGTVWHERRRPVHHSFRYAVRYALVDIDSAP-----NVLPDHLSGD 94

Query: 331 QARQITITTGPVFLLTIPPSVGYEQNPLSVYYCYDREGSAPRLKKCIAEVTNTPWGERVS 510
           +AR+I  TTGPVFLLTIPPSVGYEQNPLS+YYCYD   S   LK+CIAEVTNTPWGERV+
Sbjct: 95  EARRIAGTTGPVFLLTIPPSVGYEQNPLSLYYCYDLAASTQNLKQCIAEVTNTPWGERVT 154

Query: 511 FVFNPDSDLVAKPLHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARK 690
           FVFNP+ DLVAKPLHVSPFMDM GNWS++AN PGDNL +AI+V+HPKLG++FTATLTA+K
Sbjct: 155 FVFNPNFDLVAKPLHVSPFMDMYGNWSIKANVPGDNLLVAITVQHPKLGNYFTATLTAKK 214

Query: 691 VSSG-APSPSIFFWMMPQKVALGIYWQALKLWWKNVQFMQHPRYFCPKYREEARLRNRIL 867
           VSS       +FFW+MP KVA+ IYW ALKLWWKNVQF+ HP+   P YREEA +R+R L
Sbjct: 215 VSSSLVVDRELFFWLMPHKVAIWIYWHALKLWWKNVQFIHHPKCSNPAYREEASVRDRKL 274

Query: 868 QCCQTTEENENSRLKVDRSHSNGLADGDMVGRWCVWRDAQWPW 996
           +CCQ +   E+  + V  S  + +AD     RW  WRDA+WPW
Sbjct: 275 KCCQASGLGEDEHMLVGGSGPDFVADNYEEDRWFSWRDAKWPW 317


>ref|XP_002519663.1| conserved hypothetical protein [Ricinus communis]
           gi|223541080|gb|EEF42636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score =  340 bits (873), Expect = 3e-91
 Identities = 168/286 (58%), Positives = 202/286 (70%), Gaps = 10/286 (3%)
 Frame = +1

Query: 169 QNPELVFYQGSVYHERKRPVRHAFRYDVRYAXXXXXXXXXXXXSSFFENHLSAQQARQIT 348
           Q+  +  Y+G+V+HER+ PVRH+F+Y VRYA                  HLSA  AR+I 
Sbjct: 42  QSDSISLYEGTVWHERRHPVRHSFQYSVRYALFDLDRSPSTPVG-----HLSAHDARRIA 96

Query: 349 ITTGPVFLLTIPPSVGYEQNPLSVYYCYDREGSAPRLKKCIAEVTNTPWGERVSFVFNPD 528
            + GPV+LLTIPPSVGYEQNPLS+YYCY+ EGS   L KCIAEVTNTPWGERV+FVFNP 
Sbjct: 97  DSNGPVYLLTIPPSVGYEQNPLSLYYCYEVEGSINHLTKCIAEVTNTPWGERVTFVFNPS 156

Query: 529 SDLVAKPLHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSS-GA 705
           SDLVAKPLHVSPFMDMLGNW ++AN PGD+L + ISV+HP+ GD+F ATL A+++ S  A
Sbjct: 157 SDLVAKPLHVSPFMDMLGNWRIKANAPGDSLSVIISVQHPEFGDYFVATLEAKRLPSLLA 216

Query: 706 PSPSIFFWMMPQKVALGIYWQALKLWWKNVQFMQHPRYFCPKYREEARLRNRILQCCQTT 885
              S FFW+MPQKVAL IYW ALKLWWKNVQF+QHPRY  P+YREEA LR++ LQCC+  
Sbjct: 217 SDHSFFFWLMPQKVALWIYWHALKLWWKNVQFIQHPRYGNPRYREEAVLRDQKLQCCRAP 276

Query: 886 EENENSRLK---------VDRSHSNGLADGDMVGRWCVWRDAQWPW 996
             NE+  L+         VDRSH           R   W+DA+WPW
Sbjct: 277 TRNEDKHLEDRGFCPGSSVDRSHGE---------RQFKWKDAKWPW 313


>ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|222859776|gb|EEE97323.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  339 bits (870), Expect = 6e-91
 Identities = 164/269 (60%), Positives = 200/269 (74%)
 Frame = +1

Query: 190 YQGSVYHERKRPVRHAFRYDVRYAXXXXXXXXXXXXSSFFENHLSAQQARQITITTGPVF 369
           YQG+V+HER+RPV H+F Y VRYA                 +HLSA +ARQ+  TTGPVF
Sbjct: 46  YQGTVWHERRRPVHHSFLYSVRYALFDLDHAHAPP------DHLSADEARQVAQTTGPVF 99

Query: 370 LLTIPPSVGYEQNPLSVYYCYDREGSAPRLKKCIAEVTNTPWGERVSFVFNPDSDLVAKP 549
           LLTIPPSVGYEQNPLS+YYCYD +GSA  LKKCIAEVTNTPWGERV F+F P+SD+VAKP
Sbjct: 100 LLTIPPSVGYEQNPLSLYYCYDMDGSARLLKKCIAEVTNTPWGERVVFIFYPNSDVVAKP 159

Query: 550 LHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSSGAPSPSIFFW 729
           LHVSPFMDMLGNW+++AN+P D+L + ISV+HP+LGD+F A+L A+++SS     ++FFW
Sbjct: 160 LHVSPFMDMLGNWNIKANDPTDSLSVFISVQHPELGDYFVASLKAKRLSS-VSDHAMFFW 218

Query: 730 MMPQKVALGIYWQALKLWWKNVQFMQHPRYFCPKYREEARLRNRILQCCQTTEENENSRL 909
           +MP KVAL IYW ALKLWWKNV F+QHPRY  P YREEA +R++ LQC Q    +  + L
Sbjct: 219 LMPHKVALWIYWHALKLWWKNVHFIQHPRYTNPTYREEAMIRDKKLQCNQALAWDRGNCL 278

Query: 910 KVDRSHSNGLADGDMVGRWCVWRDAQWPW 996
           + D  H   LAD     RW  WRDA+ PW
Sbjct: 279 QADGHHPGNLADRK---RWFKWRDAKRPW 304


>ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791856 [Glycine max]
          Length = 318

 Score =  336 bits (862), Expect = 5e-90
 Identities = 157/271 (57%), Positives = 200/271 (73%), Gaps = 1/271 (0%)
 Frame = +1

Query: 190 YQGSVYHERKRPVRHAFRYDVRYAXXXXXXXXXXXXSSFFENHLSAQQARQITITTGPVF 369
           Y+G+V+H+R+ PV H+F+Y VRYA                 +HLS  +ARQIT T GP+ 
Sbjct: 53  YEGTVWHQRRHPVNHSFQYQVRYALIDLDRAPHAP-----HDHLSLDEARQITDTNGPIL 107

Query: 370 LLTIPPSVGYEQNPLSVYYCYDREGSAPRLKKCIAEVTNTPWGERVSFVFNPDSDLVAKP 549
           LLTIPPSVGYEQNPLSVYYCY  EGS  RLKKCIAEVTNTPWGERVSFVFNP SDLVAK 
Sbjct: 108 LLTIPPSVGYEQNPLSVYYCYAVEGSTKRLKKCIAEVTNTPWGERVSFVFNPHSDLVAKA 167

Query: 550 LHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSSGAPSP-SIFF 726
           LHVSPFMDMLG+W+++AN+PG+NL ++ISV HP+ G++FTA+L A+K+ S   S  ++FF
Sbjct: 168 LHVSPFMDMLGSWNIKANDPGENLTISISVHHPEHGNYFTASLKAKKLCSSPESDHAVFF 227

Query: 727 WMMPQKVALGIYWQALKLWWKNVQFMQHPRYFCPKYREEARLRNRILQCCQTTEENENSR 906
           W+MP KVA+ IYW A+KLWWKNV+F+QHPRY  P Y++EA +R++ LQCC  +++N    
Sbjct: 228 WLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYSIPTYKDEALMRDKKLQCCGLSDDNRQHL 287

Query: 907 LKVDRSHSNGLADGDMVGRWCVWRDAQWPWN 999
            +        LA+     RW  WRDA+WPW+
Sbjct: 288 QQRGSDPGCCLAELSPQNRWFRWRDAKWPWS 318


>ref|XP_002890852.1| hypothetical protein ARALYDRAFT_473232 [Arabidopsis lyrata subsp.
           lyrata] gi|297336694|gb|EFH67111.1| hypothetical protein
           ARALYDRAFT_473232 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  333 bits (854), Expect = 4e-89
 Identities = 158/295 (53%), Positives = 211/295 (71%), Gaps = 1/295 (0%)
 Frame = +1

Query: 118 PFQYIYHLIFQSKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYAXXXXXXXXXXXX 297
           PF+++ H +  S+     +P + FY+G+V+H+R RPVRH+FRY VRYA            
Sbjct: 25  PFRFLLHRLLPSRA--AVDPNVSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAITTPP 82

Query: 298 SSFFENHLSAQQARQITITTGPVFLLTIPPSVGYEQNPLSVYYCYDREGSAPRLKKCIAE 477
                +HLSA +AR+++ TTGP++LLTIPPSVGYEQNPLS+YYCYD E S+ RL KCIA+
Sbjct: 83  -----DHLSADEARRVSHTTGPIYLLTIPPSVGYEQNPLSLYYCYDLEESSKRLSKCIAQ 137

Query: 478 VTNTPWGERVSFVFNPDSDLVAKPLHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLG 657
           VTNTPWGERV+FVF+P+SDLVAK L VSPFMDMLGNW +RANEPGD+L ++I  +HP LG
Sbjct: 138 VTNTPWGERVTFVFDPESDLVAKSLQVSPFMDMLGNWKIRANEPGDDLSVSIESQHPHLG 197

Query: 658 DFFTATLTARKVS-SGAPSPSIFFWMMPQKVALGIYWQALKLWWKNVQFMQHPRYFCPKY 834
           ++F+ATL A+++       P++FFW+MP KVA+ IYW ALKLWWK+V F+QHPRY  P Y
Sbjct: 198 NYFSATLKAKRIPLMRVSDPAVFFWLMPHKVAIWIYWHALKLWWKSVPFIQHPRYSNPSY 257

Query: 835 REEARLRNRILQCCQTTEENENSRLKVDRSHSNGLADGDMVGRWCVWRDAQWPWN 999
           REEA  R++ L+C +    + +  +K D   ++G +     G    WRDA WPW+
Sbjct: 258 REEAAKRDQELRCPRLDGSDSDKTIKFDGLKADGCS---FEGCRFAWRDANWPWS 309


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