BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020220
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510145.1| F-box protein GID2, putative [Ricinus commun...   150   2e-34
ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33
ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vi...   143   3e-32
ref|XP_004141280.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   140   2e-31

>ref|XP_002510145.1| F-box protein GID2, putative [Ricinus communis]
           gi|223550846|gb|EEF52332.1| F-box protein GID2, putative
           [Ricinus communis]
          Length = 179

 Score =  150 bits (379), Expect = 2e-34
 Identities = 85/173 (49%), Positives = 104/173 (60%), Gaps = 13/173 (7%)
 Frame = +3

Query: 69  MKRPLEEHQTVVIDNKSKKKMKTEEQGGCEQA------TVFTNLGEDLLFEVLKHADPKT 230
           MKR LE     +     K K K + QG  + A      T F NL E+LL+EVLKH D +T
Sbjct: 1   MKRSLETQTENITGQDIKMKKKIKHQGEEKFADEEISGTGFVNLDENLLYEVLKHVDART 60

Query: 231 LASAACVSKQWSKTAQDERLWEMIYTRHWASKTFNSNPKKLRSMVLSMGGFRRIYSQSLW 410
           L  AACVSKQW +TAQDERLWE+I TRHWA+       ++LRS+VL++GGFRR++SQ LW
Sbjct: 61  LGRAACVSKQWHRTAQDERLWELICTRHWAN--IGCGNQQLRSVVLALGGFRRLHSQYLW 118

Query: 411 XXXXXXXXXXXXXXXXTAP-------KMPTHWGKDEVHLSLSLLSIRYFQNMN 548
                           + P       K P  WGKDEVHLSLSLLSIRY++ MN
Sbjct: 119 PLSKPQSSTSAASSSSSWPSFPPIRSKPPARWGKDEVHLSLSLLSIRYYEKMN 171


>ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|222835498|gb|EEE73933.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  146 bits (368), Expect = 4e-33
 Identities = 85/179 (47%), Positives = 105/179 (58%), Gaps = 19/179 (10%)
 Frame = +3

Query: 69  MKRPLEEHQTV--VIDNKSKKKMKTEE-------QGGCEQATVFTNLGEDLLFEVLKHAD 221
           MKRPL+    +    D K KKK   EE       +      T F NL E+LLFEVLKH D
Sbjct: 1   MKRPLDTGPEIHNKTDMKMKKKRHQEEGEIKEEIESETNTGTGFMNLDENLLFEVLKHVD 60

Query: 222 PKTLASAACVSKQWSKTAQDERLWEMIYTRHWASKTFNSNPKKLRSMVLSMGGFRRIYSQ 401
            +TL  A+CVSKQW +T QDERLWE+I T+HWA+       ++LRS+VL++GGFRR++SQ
Sbjct: 61  ARTLGRASCVSKQWHRTVQDERLWELICTKHWAN--IGCGNQQLRSVVLALGGFRRLHSQ 118

Query: 402 SLWXXXXXXXXXXXXXXXXTA-----PKM-----PTHWGKDEVHLSLSLLSIRYFQNMN 548
            LW                 +     PKM     P  WGKDEVHLSLSLLSIRY++ MN
Sbjct: 119 YLWPLSKPHSTPAPSSSSSPSAWNPFPKMIGNKPPARWGKDEVHLSLSLLSIRYYEKMN 177


>ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|222842886|gb|EEE80433.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  144 bits (364), Expect = 1e-32
 Identities = 82/178 (46%), Positives = 104/178 (58%), Gaps = 18/178 (10%)
 Frame = +3

Query: 69  MKRPLEEH--QTVVIDNKSKKKM------KTEEQGGCEQATVFTNLGEDLLFEVLKHADP 224
           MKRPL+        ID K KKK       K E +      + F NL E+LLFEVLKH D 
Sbjct: 1   MKRPLDTDPGNQNKIDIKMKKKRYQEDENKEEIESAVNTGSGFMNLDENLLFEVLKHVDA 60

Query: 225 KTLASAACVSKQWSKTAQDERLWEMIYTRHWASKTFNSNPKKLRSMVLSMGGFRRIYSQS 404
           +TL SAACVSKQW +T QDERLWE++ T+HW +       +++RS+VL++GGFRR++SQ 
Sbjct: 61  RTLGSAACVSKQWHRTVQDERLWELVCTKHWGN--MGCGNQQMRSVVLALGGFRRLHSQY 118

Query: 405 LWXXXXXXXXXXXXXXXXTAP----------KMPTHWGKDEVHLSLSLLSIRYFQNMN 548
           LW                ++           K P  WGKDEVHLSLSLLSIRY++ MN
Sbjct: 119 LWPLSKPQSNSAGSASTSSSAWNPFSPMIGNKPPARWGKDEVHLSLSLLSIRYYEKMN 176


>ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  143 bits (361), Expect = 3e-32
 Identities = 76/154 (49%), Positives = 94/154 (61%), Gaps = 17/154 (11%)
 Frame = +3

Query: 138 EEQGGCEQATVFTNLGEDLLFEVLKHADPKTLASAACVSKQWSKTAQDERLWEMIYTRHW 317
           EE G     T F NL EDLLFEVLKH D +TLA+AACVS+QW +TA DERLWEMI TRHW
Sbjct: 27  EEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERLWEMICTRHW 86

Query: 318 ASKTFNSNPKKLRSMVLSMGGFRRIYSQSLWXXXXXXXXXXXXXXXXT------------ 461
           A+       ++LRS+VL++GGFRR+++  LW                T            
Sbjct: 87  AN--VGCGTQQLRSVVLALGGFRRLHALCLWPLLKSPPSSSSSPSPYTTSSHSPQSSPFS 144

Query: 462 -----APKMPTHWGKDEVHLSLSLLSIRYFQNMN 548
                + K PT WGKDEVHLSLSLLSIR+++ M+
Sbjct: 145 PPVVPSKKAPTRWGKDEVHLSLSLLSIRFYEKMS 178


>ref|XP_004141280.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein GID2-like [Cucumis
           sativus]
          Length = 185

 Score =  140 bits (354), Expect = 2e-31
 Identities = 81/171 (47%), Positives = 97/171 (56%), Gaps = 24/171 (14%)
 Frame = +3

Query: 108 DNKSKKKMKTEEQ------GG--CEQATVFTNLGEDLLFEVLKHADPKTLASAACVSKQW 263
           D K  KK K E Q      GG  C   T F NL ++LLFEV KH D +TLA AACVSKQW
Sbjct: 11  DRKMGKKPKAETQDFTRGGGGEDCSDKTGFMNLDDNLLFEVFKHVDARTLAMAACVSKQW 70

Query: 264 SKTAQDERLWEMIYTRHWASKTFNSNPKKLRSMVLSMGGFRRIYSQSLW----------- 410
            KTA+DERLWE+I TRHWA+       ++LRS+VL++GGFRR++S  +W           
Sbjct: 71  HKTAEDERLWELICTRHWANT--GCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSS 128

Query: 411 -----XXXXXXXXXXXXXXXXTAPKMPTHWGKDEVHLSLSLLSIRYFQNMN 548
                                   K P  WGKDEVHLSLSLLSIRY++ MN
Sbjct: 129 SSSHLHPSSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMN 179