BLASTX nr result

ID: Coptis23_contig00020215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020215
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312230.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_002516415.1| conserved hypothetical protein [Ricinus comm...   174   1e-41
ref|XP_002264966.2| PREDICTED: uncharacterized protein LOC100245...   167   7e-40
emb|CBI24152.3| unnamed protein product [Vitis vinifera]              167   7e-40
ref|XP_004159179.1| PREDICTED: uncharacterized LOC101214150 [Cuc...   159   2e-37

>ref|XP_002312230.1| predicted protein [Populus trichocarpa] gi|222852050|gb|EEE89597.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  182 bits (462), Expect = 3e-44
 Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
 Frame = -3

Query: 370 YVPSPTIYIPSPSGYTPSP-VFQXXXXXXXXXXXXXXXXPHY-ALWCVVKPSVPDPIIQE 197
           Y+PSP I++PSP+G+ PSP +F                   Y ALWCV KPSVPDPIIQE
Sbjct: 170 YIPSPPIFVPSPTGFVPSPRIFHPPVVYPPPTGPPSPRTSPYTALWCVAKPSVPDPIIQE 229

Query: 196 AMNYACGSGANCESIQPSGSCYQPDTLYAHASYAFNSYWQRTKVAGGTCDFGGTGMLVTV 17
           AMNYACGSGA+C+SIQPSGSC++P+TL+AHASYAFNSYWQRTKVAGGTC FGGT MLVTV
Sbjct: 230 AMNYACGSGADCDSIQPSGSCFEPNTLFAHASYAFNSYWQRTKVAGGTCSFGGTAMLVTV 289

Query: 16  DPS 8
           DPS
Sbjct: 290 DPS 292


>ref|XP_002516415.1| conserved hypothetical protein [Ricinus communis]
           gi|223544450|gb|EEF45970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score =  174 bits (440), Expect = 1e-41
 Identities = 80/124 (64%), Positives = 92/124 (74%), Gaps = 3/124 (2%)
 Frame = -3

Query: 370 YVPSPTIYIPSPSGYTPSPVF---QXXXXXXXXXXXXXXXXPHYALWCVVKPSVPDPIIQ 200
           Y+PSP  ++PSP+G+ PSP                         ALWCV KPSVPDPIIQ
Sbjct: 131 YIPSPPSFVPSPTGFVPSPTVFLPPIVYPPPIAPPPPPSKGAPQALWCVAKPSVPDPIIQ 190

Query: 199 EAMNYACGSGANCESIQPSGSCYQPDTLYAHASYAFNSYWQRTKVAGGTCDFGGTGMLVT 20
           EAMNYACGSGA+C+S+QPSG C++P+TL+AHASYAFNSYWQRTKVAGGTC FGGT MLVT
Sbjct: 191 EAMNYACGSGADCDSLQPSGPCFEPNTLFAHASYAFNSYWQRTKVAGGTCSFGGTAMLVT 250

Query: 19  VDPS 8
           VDPS
Sbjct: 251 VDPS 254


>ref|XP_002264966.2| PREDICTED: uncharacterized protein LOC100245083 [Vitis vinifera]
          Length = 533

 Score =  167 bits (424), Expect = 7e-40
 Identities = 80/128 (62%), Positives = 93/128 (72%), Gaps = 7/128 (5%)
 Frame = -3

Query: 370 YVPSPTIYIPSP------SGYTPSPVFQXXXXXXXXXXXXXXXXP-HYALWCVVKPSVPD 212
           +VPSP  Y+P+P       G+ P+P FQ                  ++ LWCV KP+VPD
Sbjct: 397 FVPSPPHYVPTPRGPGGPGGFVPTPPFQPPVVFPPPTVPPPPHKGPNFPLWCVAKPTVPD 456

Query: 211 PIIQEAMNYACGSGANCESIQPSGSCYQPDTLYAHASYAFNSYWQRTKVAGGTCDFGGTG 32
           PII+EAMNYACGSGA+C SI  SGSC+QPDTL+AHASYAFNSYWQRTKVAGGTCDFGGT 
Sbjct: 457 PIIEEAMNYACGSGADCASIGSSGSCFQPDTLFAHASYAFNSYWQRTKVAGGTCDFGGTA 516

Query: 31  MLVTVDPS 8
           MLV+VDPS
Sbjct: 517 MLVSVDPS 524


>emb|CBI24152.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  167 bits (424), Expect = 7e-40
 Identities = 80/128 (62%), Positives = 93/128 (72%), Gaps = 7/128 (5%)
 Frame = -3

Query: 370 YVPSPTIYIPSP------SGYTPSPVFQXXXXXXXXXXXXXXXXP-HYALWCVVKPSVPD 212
           +VPSP  Y+P+P       G+ P+P FQ                  ++ LWCV KP+VPD
Sbjct: 232 FVPSPPHYVPTPRGPGGPGGFVPTPPFQPPVVFPPPTVPPPPHKGPNFPLWCVAKPTVPD 291

Query: 211 PIIQEAMNYACGSGANCESIQPSGSCYQPDTLYAHASYAFNSYWQRTKVAGGTCDFGGTG 32
           PII+EAMNYACGSGA+C SI  SGSC+QPDTL+AHASYAFNSYWQRTKVAGGTCDFGGT 
Sbjct: 292 PIIEEAMNYACGSGADCASIGSSGSCFQPDTLFAHASYAFNSYWQRTKVAGGTCDFGGTA 351

Query: 31  MLVTVDPS 8
           MLV+VDPS
Sbjct: 352 MLVSVDPS 359


>ref|XP_004159179.1| PREDICTED: uncharacterized LOC101214150 [Cucumis sativus]
          Length = 266

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/119 (62%), Positives = 87/119 (73%)
 Frame = -3

Query: 364 PSPTIYIPSPSGYTPSPVFQXXXXXXXXXXXXXXXXPHYALWCVVKPSVPDPIIQEAMNY 185
           PSPT+++PSP  + P  ++                  + ALWCV KPSVPDPIIQEAMNY
Sbjct: 144 PSPTVFVPSPPVFQPPVIYPPPSVPPPPHSAP-----NIALWCVAKPSVPDPIIQEAMNY 198

Query: 184 ACGSGANCESIQPSGSCYQPDTLYAHASYAFNSYWQRTKVAGGTCDFGGTGMLVTVDPS 8
           ACG+ A+C+SI PSG C+ P+TL AHASYAFNSYWQRTKV GGTC+FGGT MLVTVDPS
Sbjct: 199 ACGTVADCDSILPSGPCFMPNTLIAHASYAFNSYWQRTKVGGGTCEFGGTAMLVTVDPS 257


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