BLASTX nr result

ID: Coptis23_contig00020214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020214
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...    83   3e-14
emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]    83   3e-14
ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796...    79   5e-13
ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801...    76   3e-12

>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/86 (47%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
 Frame = -3

Query: 253 ASNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQ 83
           AS+I + ++++ G+  SD+I+ Q+ ASKDPGK SY S++++EP   FSSY+ KR SERLQ
Sbjct: 647 ASSIVKGSNRNGGMALSDIIT-QIQASKDPGKLSYRSNMTSEPLSAFSSYSAKRVSERLQ 705

Query: 82  DGSHIEENTDMRINR*YLNTHTDRQY 5
           +   +E+N+++R  R Y+N  +DRQY
Sbjct: 706 ERGSLEDNSEIREARRYMNQQSDRQY 731


>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
          Length = 1135

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/86 (47%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
 Frame = -3

Query: 253 ASNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQ 83
           AS+I + ++++ G+  SD+I+ Q+ ASKDPGK SY S++++EP   FSSY+ KR SERLQ
Sbjct: 342 ASSIVKGSNRNGGMALSDIIT-QIQASKDPGKLSYRSNMTSEPLSAFSSYSAKRVSERLQ 400

Query: 82  DGSHIEENTDMRINR*YLNTHTDRQY 5
           +   +E+N+++R  R Y+N  +DRQY
Sbjct: 401 ERGSLEDNSEIREARRYMNQQSDRQY 426


>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
           gi|223539723|gb|EEF41305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1384

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = -3

Query: 250 SNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQD 80
           ++IS+ ++++ GL+ SD+I+ Q+ ASKD  K SY S+ + E    FSSYT KR SERL +
Sbjct: 587 TSISKGSNRNGGLVLSDIIT-QIQASKDSAKLSYQSTAAAESLPAFSSYTAKRASERLHE 645

Query: 79  GSHIEENTDMRINR*YLNTHTDRQYL 2
            S  EEN D+R  R + ++HTDRQY+
Sbjct: 646 RSSFEENNDIREARRFAHSHTDRQYI 671


>ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796697 [Glycine max]
          Length = 1440

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/83 (49%), Positives = 60/83 (72%)
 Frame = -3

Query: 250 SNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEPFSSYTTKRTSERLQDGSH 71
           S I++ ++++ GL  SD+I+ Q+ ASKD  K SY S++  EP SSY++KR SER Q+ S 
Sbjct: 649 SGINKGSNRNGGLGLSDIIT-QIQASKDSAKLSYRSNVGIEPLSSYSSKRASER-QERSS 706

Query: 70  IEENTDMRINR*YLNTHTDRQYL 2
           +++N DMR  R Y+N +TDRQYL
Sbjct: 707 LDDNHDMRETRRYMNPNTDRQYL 729


>ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max]
          Length = 1428

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/87 (43%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
 Frame = -3

Query: 253 ASNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQ 83
           A+  ++A+++  GL  SD+I+ Q+ ASKD G+ SY++++  EP   FSS+++KR +E+LQ
Sbjct: 648 AAGANKASNRHGGLGLSDIIT-QIQASKDSGRLSYNTNVGIEPLSAFSSFSSKRATEKLQ 706

Query: 82  DGSHIEENTDMRINR*YLNTHTDRQYL 2
           +   I+EN+DMR  R Y+N + DRQY+
Sbjct: 707 ERGSIDENSDMRETRRYMNPNIDRQYM 733


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