BLASTX nr result
ID: Coptis23_contig00020214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00020214 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi... 83 3e-14 emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera] 83 3e-14 ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm... 79 4e-13 ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796... 79 5e-13 ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801... 76 3e-12 >ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera] Length = 1440 Score = 82.8 bits (203), Expect = 3e-14 Identities = 41/86 (47%), Positives = 64/86 (74%), Gaps = 3/86 (3%) Frame = -3 Query: 253 ASNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQ 83 AS+I + ++++ G+ SD+I+ Q+ ASKDPGK SY S++++EP FSSY+ KR SERLQ Sbjct: 647 ASSIVKGSNRNGGMALSDIIT-QIQASKDPGKLSYRSNMTSEPLSAFSSYSAKRVSERLQ 705 Query: 82 DGSHIEENTDMRINR*YLNTHTDRQY 5 + +E+N+++R R Y+N +DRQY Sbjct: 706 ERGSLEDNSEIREARRYMNQQSDRQY 731 >emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera] Length = 1135 Score = 82.8 bits (203), Expect = 3e-14 Identities = 41/86 (47%), Positives = 64/86 (74%), Gaps = 3/86 (3%) Frame = -3 Query: 253 ASNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQ 83 AS+I + ++++ G+ SD+I+ Q+ ASKDPGK SY S++++EP FSSY+ KR SERLQ Sbjct: 342 ASSIVKGSNRNGGMALSDIIT-QIQASKDPGKLSYRSNMTSEPLSAFSSYSAKRVSERLQ 400 Query: 82 DGSHIEENTDMRINR*YLNTHTDRQY 5 + +E+N+++R R Y+N +DRQY Sbjct: 401 ERGSLEDNSEIREARRYMNQQSDRQY 426 >ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis] gi|223539723|gb|EEF41305.1| conserved hypothetical protein [Ricinus communis] Length = 1384 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 3/86 (3%) Frame = -3 Query: 250 SNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQD 80 ++IS+ ++++ GL+ SD+I+ Q+ ASKD K SY S+ + E FSSYT KR SERL + Sbjct: 587 TSISKGSNRNGGLVLSDIIT-QIQASKDSAKLSYQSTAAAESLPAFSSYTAKRASERLHE 645 Query: 79 GSHIEENTDMRINR*YLNTHTDRQYL 2 S EEN D+R R + ++HTDRQY+ Sbjct: 646 RSSFEENNDIREARRFAHSHTDRQYI 671 >ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796697 [Glycine max] Length = 1440 Score = 78.6 bits (192), Expect = 5e-13 Identities = 41/83 (49%), Positives = 60/83 (72%) Frame = -3 Query: 250 SNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEPFSSYTTKRTSERLQDGSH 71 S I++ ++++ GL SD+I+ Q+ ASKD K SY S++ EP SSY++KR SER Q+ S Sbjct: 649 SGINKGSNRNGGLGLSDIIT-QIQASKDSAKLSYRSNVGIEPLSSYSSKRASER-QERSS 706 Query: 70 IEENTDMRINR*YLNTHTDRQYL 2 +++N DMR R Y+N +TDRQYL Sbjct: 707 LDDNHDMRETRRYMNPNTDRQYL 729 >ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max] Length = 1428 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/87 (43%), Positives = 63/87 (72%), Gaps = 3/87 (3%) Frame = -3 Query: 253 ASNISRATSQSSGLITSDLISAQVHASKDPGKFSYHSSLSTEP---FSSYTTKRTSERLQ 83 A+ ++A+++ GL SD+I+ Q+ ASKD G+ SY++++ EP FSS+++KR +E+LQ Sbjct: 648 AAGANKASNRHGGLGLSDIIT-QIQASKDSGRLSYNTNVGIEPLSAFSSFSSKRATEKLQ 706 Query: 82 DGSHIEENTDMRINR*YLNTHTDRQYL 2 + I+EN+DMR R Y+N + DRQY+ Sbjct: 707 ERGSIDENSDMRETRRYMNPNIDRQYM 733