BLASTX nr result
ID: Coptis23_contig00020187
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00020187 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFG56393.1| Pinus taeda anonymous locus UMN_5889_01 genomic s... 98 8e-19 gb|AFG56391.1| Pinus taeda anonymous locus UMN_5889_01 genomic s... 97 2e-18 gb|ABK24764.1| unknown [Picea sitchensis] 92 3e-17 gb|ABK24579.1| unknown [Picea sitchensis] 92 3e-17 ref|XP_004154702.1| PREDICTED: probable polyamine transporter At... 90 2e-16 >gb|AFG56393.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence Length = 133 Score = 97.8 bits (242), Expect = 8e-19 Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 2/75 (2%) Frame = -1 Query: 221 SKNMDTYLDESKLEAN--QPDSKGGTKSKKLTMLPLMFLIYFAVSGGPFGEEPTVKAAGP 48 S N D + +EA + +S+ G+KSKKL ++PL+FLIYF VSGGPFGEEP VKAAGP Sbjct: 9 SSNDDEDQEHENIEAGGQRIESRSGSKSKKLKLIPLIFLIYFEVSGGPFGEEPAVKAAGP 68 Query: 47 LLAIIGFLVFPFIWS 3 LLAI GFLVFPF+WS Sbjct: 69 LLAIAGFLVFPFVWS 83 >gb|AFG56391.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence gi|383149053|gb|AFG56392.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence gi|383149055|gb|AFG56394.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence gi|383149056|gb|AFG56395.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence Length = 133 Score = 96.7 bits (239), Expect = 2e-18 Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 2/75 (2%) Frame = -1 Query: 221 SKNMDTYLDESKLEAN--QPDSKGGTKSKKLTMLPLMFLIYFAVSGGPFGEEPTVKAAGP 48 S N D + +EA + +S G+KSKKL ++PL+FLIYF VSGGPFGEEP VKAAGP Sbjct: 9 SSNDDEDQEHENIEAGGQRIESHSGSKSKKLKLIPLIFLIYFEVSGGPFGEEPAVKAAGP 68 Query: 47 LLAIIGFLVFPFIWS 3 LLAI GFLVFPF+WS Sbjct: 69 LLAIAGFLVFPFVWS 83 >gb|ABK24764.1| unknown [Picea sitchensis] Length = 487 Score = 92.4 bits (228), Expect = 3e-17 Identities = 41/55 (74%), Positives = 49/55 (89%) Frame = -1 Query: 167 DSKGGTKSKKLTMLPLMFLIYFAVSGGPFGEEPTVKAAGPLLAIIGFLVFPFIWS 3 +S+ G+KSKKL ++PL+FLIYF VSGGPFGEE VKAAGPLLAI GFL+FPF+WS Sbjct: 24 ESRSGSKSKKLKLIPLIFLIYFEVSGGPFGEETAVKAAGPLLAIAGFLIFPFVWS 78 >gb|ABK24579.1| unknown [Picea sitchensis] Length = 487 Score = 92.4 bits (228), Expect = 3e-17 Identities = 41/55 (74%), Positives = 49/55 (89%) Frame = -1 Query: 167 DSKGGTKSKKLTMLPLMFLIYFAVSGGPFGEEPTVKAAGPLLAIIGFLVFPFIWS 3 +S+ G+KSKKL ++PL+FLIYF VSGGPFGEE VKAAGPLLAI GFL+FPF+WS Sbjct: 24 ESRSGSKSKKLKLIPLIFLIYFEVSGGPFGEETAVKAAGPLLAIAGFLIFPFVWS 78 >ref|XP_004154702.1| PREDICTED: probable polyamine transporter At3g13620-like [Cucumis sativus] Length = 474 Score = 90.1 bits (222), Expect = 2e-16 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 2/78 (2%) Frame = -1 Query: 230 EQDSKNMDTYLDESK--LEANQPDSKGGTKSKKLTMLPLMFLIYFAVSGGPFGEEPTVKA 57 +Q + N D S L P + + KKLT++PL+FLIYF V+GGP+GEEPTV+A Sbjct: 6 QQSNSNQPATTDSSSQILPTTTPSTPPSVR-KKLTLIPLIFLIYFEVAGGPYGEEPTVQA 64 Query: 56 AGPLLAIIGFLVFPFIWS 3 AGPLLAIIGF+VFPFIWS Sbjct: 65 AGPLLAIIGFIVFPFIWS 82