BLASTX nr result

ID: Coptis23_contig00020182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020182
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531649.1| PREDICTED: ABC transporter G family member 3...    99   3e-19
ref|XP_003530098.1| PREDICTED: ABC transporter G family member 3...    99   3e-19
ref|XP_002278313.2| PREDICTED: ABC transporter G family member 2...    99   5e-19
emb|CBI36070.3| unnamed protein product [Vitis vinifera]               99   5e-19
gb|AFN42938.1| pleiotropic drug resistance transporter 5b [Nicot...    97   1e-18

>ref|XP_003531649.1| PREDICTED: ABC transporter G family member 36-like [Glycine max]
          Length = 1445

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/83 (61%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -1

Query: 245 STSISRNMSKTNWGMEDVFVST--SRKSTAINEDEEALVWAALEKLPTYDRLRTGIMKSF 72
           S SISR++S+++W ME+VF S   SR+++ ++EDEEAL WAA+EKLPTYDRLRT I+++F
Sbjct: 7   SRSISRSISRSSWKMEEVFASGRYSRRTSHVDEDEEALKWAAIEKLPTYDRLRTSIIQTF 66

Query: 71  MENESHDKLVHKEIDVRKLDVND 3
            E +     VHKEIDVRKLDVND
Sbjct: 67  AEGDQAG--VHKEIDVRKLDVND 87


>ref|XP_003530098.1| PREDICTED: ABC transporter G family member 36-like [Glycine max]
          Length = 1482

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/84 (60%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
 Frame = -1

Query: 248 MSTSISRNMSKTNWGMEDVFVST--SRKSTAINEDEEALVWAALEKLPTYDRLRTGIMKS 75
           +S SISR++S+++W ME+VF S   SR+++ + EDEEAL WAA+EKLPTYDRLRT I+++
Sbjct: 6   ISRSISRSISRSSWKMEEVFASGRYSRRTSHVEEDEEALKWAAIEKLPTYDRLRTSIIQT 65

Query: 74  FMENESHDKLVHKEIDVRKLDVND 3
           F E +     VHKEIDVRKLDVND
Sbjct: 66  FAEGDQTG--VHKEIDVRKLDVND 87


>ref|XP_002278313.2| PREDICTED: ABC transporter G family member 29-like [Vitis vinifera]
          Length = 1438

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/83 (61%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 ISRNMSKTNWGMEDVFVSTSRKSTAIN--EDEEALVWAALEKLPTYDRLRTGIMKSFMEN 63
           +SR+ S+ +WG+EDVF S SR+S   N  +DEEAL WAALEKLPTYDRLRT I+KSF +N
Sbjct: 12  VSRSRSRGSWGVEDVF-SASRRSRRSNLDDDEEALRWAALEKLPTYDRLRTSIIKSFEDN 70

Query: 62  ESH---DKLVHKEIDVRKLDVND 3
           + +   +++VHKE+DVRKLD+ND
Sbjct: 71  DHNNQGNRVVHKEVDVRKLDIND 93


>emb|CBI36070.3| unnamed protein product [Vitis vinifera]
          Length = 1493

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/83 (61%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 ISRNMSKTNWGMEDVFVSTSRKSTAIN--EDEEALVWAALEKLPTYDRLRTGIMKSFMEN 63
           +SR+ S+ +WG+EDVF S SR+S   N  +DEEAL WAALEKLPTYDRLRT I+KSF +N
Sbjct: 12  VSRSRSRGSWGVEDVF-SASRRSRRSNLDDDEEALRWAALEKLPTYDRLRTSIIKSFEDN 70

Query: 62  ESH---DKLVHKEIDVRKLDVND 3
           + +   +++VHKE+DVRKLD+ND
Sbjct: 71  DHNNQGNRVVHKEVDVRKLDIND 93


>gb|AFN42938.1| pleiotropic drug resistance transporter 5b [Nicotiana tabacum]
          Length = 1498

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/86 (58%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
 Frame = -1

Query: 248 MSTSISRNMSKTNWGMEDVF-VSTSRKSTAINEDEEALVWAALEKLPTYDRLRTGIMKSF 72
           MS ++SR+ S+ NW +EDVF    SR+ST   EDEEAL WAALEKLPTYDRLR  ++KS 
Sbjct: 17  MSRTMSRSRSRANWNVEDVFNPMPSRRSTRGEEDEEALTWAALEKLPTYDRLRKTVLKSV 76

Query: 71  ME---NESHDKLVHKEIDVRKLDVND 3
           ME   N+ + K+VHKE+DVR L +N+
Sbjct: 77  MESENNQGNKKVVHKEVDVRNLGMNE 102


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