BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020176
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002510983.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_003598401.1| F-box domain containing protein [Medicago tr...    70   2e-10
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
 Frame = +3

Query: 99  FLDCCNGMLLFFDQSSMQFYVCNPSTEQYIAIPNCPWSRFAPVDGALFFD----PHFKVV 266
           FLDCCNG+LLF +  ++Q+YVCNP+T+  +AIP   +     +  AL FD    PH++VV
Sbjct: 123 FLDCCNGLLLFVEGCTLQYYVCNPATKHCVAIPR-DFMLENIIFAALAFDPSTSPHYRVV 181

Query: 267 --NISGSHP--RLNIFSQATGQWSVYNIHLDPCVSDCFWSPRFVFLDGSLYKLAMSGHLM 434
             + S S P  RL +FS  TG W+            C      ++LDG+LY ++ S H++
Sbjct: 182 CFDYSESRPPVRLQVFSSETGNWTGNETPFGYSNKKCKVVKHCIYLDGALYCISTSKHII 241

Query: 435 IIDVEQIAFRAIKL 476
             D+ +   RAI+L
Sbjct: 242 CFDLNRGNSRAIEL 255


>ref|XP_002510983.1| conserved hypothetical protein [Ricinus communis]
           gi|223550098|gb|EEF51585.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 323

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
 Frame = +3

Query: 102 LDCCNGMLLFFDQSSMQFYVCNPSTEQYIAIPNC-PWSRFAP--VDGALFFDP----HFK 260
           LDCCNG+LL +     ++ VCNP T+QY+++    P ++     ++ AL FDP    H+K
Sbjct: 90  LDCCNGLLLLW-VCDKEYVVCNPVTKQYVSLKLLVPRNQVTGLLINAALAFDPSISPHYK 148

Query: 261 VVNISGSHPRLNIFSQATGQWSVYNIHLDPCVSDCFWSPRFVFLDGSLYKLAMSGHLM-- 434
           VV     + RL +FS  +  W+     L   +S   W    ++  G++YKL+ SGH++  
Sbjct: 149 VVLFDSRNNRLLVFSSKSWSWNPLKYELQDVLSILRWDKESIYFCGAIYKLSKSGHVVKF 208

Query: 435 IIDVEQIA---FRAIKL 476
            ID E++A    RAIKL
Sbjct: 209 SIDEEKVASDRVRAIKL 225


>ref|XP_003598401.1| F-box domain containing protein [Medicago truncatula]
           gi|358348364|ref|XP_003638217.1| F-box domain containing
           protein [Medicago truncatula]
           gi|355487449|gb|AES68652.1| F-box domain containing
           protein [Medicago truncatula]
           gi|355504152|gb|AES85355.1| F-box domain containing
           protein [Medicago truncatula]
          Length = 405

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
 Frame = +3

Query: 93  DSFLDCCNGMLLFFDQSSM---------QFYVCNPSTEQYIAI--PNCPWSRFAPVDGAL 239
           +  +D CNG+LLF+               +YV N  T+Q +A+  PN   SR A     L
Sbjct: 105 NKLIDSCNGLLLFYHNYGRAQNLTHGVYHYYVMNHVTKQCVAVSKPNGQISR-AYSYATL 163

Query: 240 FFDP----HFKVVNISGSHPRLNIFSQATGQWSVYNIHLDPCVSDCFWSPRFVFLDGSLY 407
            +DP     F++VN  G H  +N+FS   G W+   + L   +    W+ + V+ +GSLY
Sbjct: 164 VYDPTKSRFFQIVNFQG-HRHVNVFSSKNGIWTTQTLILPKYIIASSWTKKSVYFNGSLY 222

Query: 408 KLAMSGHLMIIDVE 449
           +L+ SGHL+ I V+
Sbjct: 223 RLSRSGHLVKIKVD 236


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 25/153 (16%)
 Frame = +3

Query: 93  DSFLDCCNGMLLFFDQSSMQ-----FYVCNPSTEQYIAIPNCPWSRFAPVDGALFFD--- 248
           D + DCCNG+LLF  +   +     ++VCN +T Q +AIPN P  R AP   A+ +D   
Sbjct: 104 DHYFDCCNGLLLFVRREQREDLPHYYFVCNTTTRQCVAIPN-PRPRTAPFAAAIAYDPAK 162

Query: 249 -PHFKVVNI------SGSHPRLNIFSQATGQWSVYNIHL---------DPCVSDCFWSPR 380
            PH+KVV        +    +L+IFS  TG+W    + L         D     C    R
Sbjct: 163 SPHYKVVRFIYLEEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCI--RR 220

Query: 381 FVFLDGSLYKLA-MSGHLMIIDVEQIAFRAIKL 476
            ++LDG +YKL+ +  +L+  D+   +  AI+L
Sbjct: 221 SIYLDGMIYKLSFVVNYLIRFDLNAPSDVAIEL 253


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 25/153 (16%)
 Frame = +3

Query: 93  DSFLDCCNGMLLFFDQSSMQ-----FYVCNPSTEQYIAIPNCPWSRFAPVDGALFFD--- 248
           D + DCCNG+LLF  +   +     ++VCN +T Q +AIPN P  R AP   A+ +D   
Sbjct: 104 DHYFDCCNGLLLFVRREQREALPHYYFVCNTTTRQCVAIPN-PRPRTAPFAAAIAYDPAK 162

Query: 249 -PHFKVVNI------SGSHPRLNIFSQATGQWSVYNIHL---------DPCVSDCFWSPR 380
            PH+KVV        +    +L+IFS  TG+W    + L         D     C    R
Sbjct: 163 SPHYKVVRFIYLEEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCI--RR 220

Query: 381 FVFLDGSLYKLA-MSGHLMIIDVEQIAFRAIKL 476
            ++LDG +YKL+ +  +L+  D+   +  AI+L
Sbjct: 221 SIYLDGMIYKLSFVVNYLIRFDLNAPSDVAIEL 253