BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020169
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267469.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   486   e-135
ref|XP_003542190.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   477   e-132
ref|XP_002320530.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_004144553.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   467   e-129
ref|XP_002532210.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   458   e-127

>ref|XP_002267469.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic [Vitis
           vinifera] gi|296085051|emb|CBI28466.3| unnamed protein
           product [Vitis vinifera]
          Length = 497

 Score =  486 bits (1250), Expect = e-135
 Identities = 240/290 (82%), Positives = 257/290 (88%), Gaps = 10/290 (3%)
 Frame = +2

Query: 2   VRRRNPSSLSWVLRCSTNTS----------FPWGCDTDSLENASALQKWLSKSGLPPQKM 151
           + RR+P      +RCS +T+           PWGC+ DSLENA+ LQKWLS SGLPPQKM
Sbjct: 31  IPRRHP------IRCSISTTDTAKTSVTQKIPWGCEVDSLENAALLQKWLSDSGLPPQKM 84

Query: 152 GIERVQVGERGLVALKNIRKGEKLLFVPPSLVISADSEWSCTEVGKVLKRNSVPDWPLLA 331
           GIERV+VGERGLVALKNIRKGEKLLFVPPSLVI+ADSEWSCTE G+VLKRNSVPDWPLLA
Sbjct: 85  GIERVEVGERGLVALKNIRKGEKLLFVPPSLVITADSEWSCTEAGEVLKRNSVPDWPLLA 144

Query: 332 TYLISEASLMESSRWSSYISALPRQPYSLLYWTRSELDKYLVASQIRERAIERINDVAGT 511
           TYLI EAS M+SSRWS+YISALPRQPYSLLYWTR+ELDKYL ASQIRERAIERINDV GT
Sbjct: 145 TYLIGEASFMQSSRWSNYISALPRQPYSLLYWTRAELDKYLEASQIRERAIERINDVTGT 204

Query: 512 YNDLRLRIFSKYPHLFPLEVFNMETFKWSFGILFSRLVRLPSMDGNVALVPWADMLNHSC 691
           YNDLRLRIFSK+PHLFP EVFNMETFKWSFGILFSRLVRLPSMD  +ALVPWADMLNHSC
Sbjct: 205 YNDLRLRIFSKHPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDEKIALVPWADMLNHSC 264

Query: 692 EVETFLDYDKSSQGVFYTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPK 841
           EVETFLDYDKSSQGV +TTDR YQP EQVFISYGKKSNGELLLSYGFVP+
Sbjct: 265 EVETFLDYDKSSQGVVFTTDRTYQPSEQVFISYGKKSNGELLLSYGFVPR 314


>ref|XP_003542190.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Glycine
           max]
          Length = 499

 Score =  477 bits (1227), Expect = e-132
 Identities = 229/258 (88%), Positives = 248/258 (96%)
 Frame = +2

Query: 68  WGCDTDSLENASALQKWLSKSGLPPQKMGIERVQVGERGLVALKNIRKGEKLLFVPPSLV 247
           WGC+ DSLEN+SALQ+WLS+SGLPPQKMGIERV+VGERGLVALKNIRKGEKLLFVPPSLV
Sbjct: 59  WGCEIDSLENSSALQRWLSESGLPPQKMGIERVEVGERGLVALKNIRKGEKLLFVPPSLV 118

Query: 248 ISADSEWSCTEVGKVLKRNSVPDWPLLATYLISEASLMESSRWSSYISALPRQPYSLLYW 427
           I+ DSEWSC E G+VLKRNSVPDWPLLATYLISEASLMESSRWS+YISALPRQPYSLLYW
Sbjct: 119 ITPDSEWSCPEAGEVLKRNSVPDWPLLATYLISEASLMESSRWSNYISALPRQPYSLLYW 178

Query: 428 TRSELDKYLVASQIRERAIERINDVAGTYNDLRLRIFSKYPHLFPLEVFNMETFKWSFGI 607
           T++ELD+YL ASQIRERAIERIN+V GTYNDLRLRIFSKYP LFP EVFN+E+FKWSFGI
Sbjct: 179 TQAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPDLFPDEVFNIESFKWSFGI 238

Query: 608 LFSRLVRLPSMDGNVALVPWADMLNHSCEVETFLDYDKSSQGVFYTTDRPYQPGEQVFIS 787
           LFSRLVRLPSM GNVALVPWADMLNHSC+VETFLDYDK+S+G+ +TTDRPYQPGEQVFIS
Sbjct: 239 LFSRLVRLPSMGGNVALVPWADMLNHSCDVETFLDYDKTSKGIVFTTDRPYQPGEQVFIS 298

Query: 788 YGKKSNGELLLSYGFVPK 841
           YGKKSNGELLLSYGFVPK
Sbjct: 299 YGKKSNGELLLSYGFVPK 316


>ref|XP_002320530.1| predicted protein [Populus trichocarpa] gi|222861303|gb|EEE98845.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  469 bits (1207), Expect = e-130
 Identities = 233/292 (79%), Positives = 254/292 (86%), Gaps = 12/292 (4%)
 Frame = +2

Query: 2   VRRRNPSSLSWVLRCSTNTS------------FPWGCDTDSLENASALQKWLSKSGLPPQ 145
           + +R+P+     ++CS +TS             PWGCD DSLENA ALQKWLS SGLPPQ
Sbjct: 34  LHKRHPA-----IQCSISTSSDTKAAAKVSETVPWGCDIDSLENAEALQKWLSDSGLPPQ 88

Query: 146 KMGIERVQVGERGLVALKNIRKGEKLLFVPPSLVISADSEWSCTEVGKVLKRNSVPDWPL 325
           KM I++V+VGERGLVALKNIRKGE LLFVPPSLVI+ADSEWSC E G+VLK+ SVPDWPL
Sbjct: 89  KMAIQKVEVGERGLVALKNIRKGEMLLFVPPSLVIAADSEWSCPEAGEVLKKYSVPDWPL 148

Query: 326 LATYLISEASLMESSRWSSYISALPRQPYSLLYWTRSELDKYLVASQIRERAIERINDVA 505
           LATYLISEAS  +SSRWS+YISALPRQPYSLLYWTR+ELD YL ASQIRERAIERI +V 
Sbjct: 149 LATYLISEASFEKSSRWSNYISALPRQPYSLLYWTRAELDTYLEASQIRERAIERITNVT 208

Query: 506 GTYNDLRLRIFSKYPHLFPLEVFNMETFKWSFGILFSRLVRLPSMDGNVALVPWADMLNH 685
           GTYNDLRLRIFSKYPHLFP EVFNMETFKWSFGILFSRLVRLPSMDG VALVPWADMLNH
Sbjct: 209 GTYNDLRLRIFSKYPHLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNH 268

Query: 686 SCEVETFLDYDKSSQGVFYTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPK 841
           S EVETFLDYDKSS+GV +TTDRPYQPGEQVFISYG+KSNGELLLSYGFVP+
Sbjct: 269 SSEVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPR 320


>ref|XP_004144553.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Cucumis
           sativus] gi|449511789|ref|XP_004164054.1| PREDICTED: LOW
           QUALITY PROTEIN: ribulose-1,5 bisphosphate
           carboxylase/oxygenase large subunit N-methyltransferase,
           chloroplastic-like [Cucumis sativus]
          Length = 497

 Score =  467 bits (1202), Expect = e-129
 Identities = 224/267 (83%), Positives = 245/267 (91%)
 Frame = +2

Query: 41  RCSTNTSFPWGCDTDSLENASALQKWLSKSGLPPQKMGIERVQVGERGLVALKNIRKGEK 220
           R +     PWGC+ DSLENASALQKWLS+SGLP QKM I+RV VGERGLVALKN+RKGEK
Sbjct: 48  RVAATGPIPWGCEIDSLENASALQKWLSESGLPDQKMSIQRVNVGERGLVALKNVRKGEK 107

Query: 221 LLFVPPSLVISADSEWSCTEVGKVLKRNSVPDWPLLATYLISEASLMESSRWSSYISALP 400
           LLFVPPSLVISA+SEWSC E G+VLKRNSVPDWPL+ATYLISEASLM+SSRW++YISALP
Sbjct: 108 LLFVPPSLVISAESEWSCPEAGEVLKRNSVPDWPLIATYLISEASLMKSSRWNNYISALP 167

Query: 401 RQPYSLLYWTRSELDKYLVASQIRERAIERINDVAGTYNDLRLRIFSKYPHLFPLEVFNM 580
           RQPYSLLYWTR ELD+YL AS+IRERAIERI +V GTYNDL +R+FSK+P LFP EVFN+
Sbjct: 168 RQPYSLLYWTREELDRYLEASEIRERAIERITNVVGTYNDLSIRVFSKHPELFPEEVFNI 227

Query: 581 ETFKWSFGILFSRLVRLPSMDGNVALVPWADMLNHSCEVETFLDYDKSSQGVFYTTDRPY 760
           ETFKWSFGILFSRLVRLPSMDG VALVPWADMLNH+CEVETFLDYDK+SQGV +TTDR Y
Sbjct: 228 ETFKWSFGILFSRLVRLPSMDGKVALVPWADMLNHNCEVETFLDYDKASQGVVFTTDRAY 287

Query: 761 QPGEQVFISYGKKSNGELLLSYGFVPK 841
           QPGEQVFISYGKKSNGELLLSYGFVPK
Sbjct: 288 QPGEQVFISYGKKSNGELLLSYGFVPK 314


>ref|XP_002532210.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase, chloroplast precursor, putative
           [Ricinus communis] gi|223528106|gb|EEF30179.1|
           Ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 508

 Score =  458 bits (1179), Expect = e-127
 Identities = 220/259 (84%), Positives = 241/259 (93%)
 Frame = +2

Query: 65  PWGCDTDSLENASALQKWLSKSGLPPQKMGIERVQVGERGLVALKNIRKGEKLLFVPPSL 244
           PWGCD DS +NA+ALQ+WLS +GLP QKM I++V+VGERGLVALKNIRKGEKLLFVPPSL
Sbjct: 67  PWGCDIDSSDNAAALQRWLSNNGLPDQKMAIDKVEVGERGLVALKNIRKGEKLLFVPPSL 126

Query: 245 VISADSEWSCTEVGKVLKRNSVPDWPLLATYLISEASLMESSRWSSYISALPRQPYSLLY 424
           VI+ADSEWSC E G+VLK+ SVPDWPLLA YLISEA+L +SS+WS+YISALPRQPYSLLY
Sbjct: 127 VITADSEWSCPEAGEVLKQYSVPDWPLLAIYLISEANLQKSSKWSNYISALPRQPYSLLY 186

Query: 425 WTRSELDKYLVASQIRERAIERINDVAGTYNDLRLRIFSKYPHLFPLEVFNMETFKWSFG 604
           WTR+ELD+YL ASQIRERAIERI +V GTYNDLRLRIFSKYP LFP EVFN+ETFKWSFG
Sbjct: 187 WTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNLETFKWSFG 246

Query: 605 ILFSRLVRLPSMDGNVALVPWADMLNHSCEVETFLDYDKSSQGVFYTTDRPYQPGEQVFI 784
           ILFSRLVRLPSMDG VALVPWADMLNHSCEVETFLDYDKSSQGV +TTDR Y+PGEQVFI
Sbjct: 247 ILFSRLVRLPSMDGKVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYEPGEQVFI 306

Query: 785 SYGKKSNGELLLSYGFVPK 841
           SYGKKSNGELLLSYGFVP+
Sbjct: 307 SYGKKSNGELLLSYGFVPR 325