BLASTX nr result
ID: Coptis23_contig00020161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00020161 (359 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633984.1| PREDICTED: probable F-box protein At3g61730-... 55 5e-06 ref|XP_002281745.1| PREDICTED: probable F-box protein At3g61730 ... 55 5e-06 ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|2235... 55 6e-06 ref|XP_003608270.1| aarF domain-containing protein kinase, putat... 55 8e-06 >ref|XP_003633984.1| PREDICTED: probable F-box protein At3g61730-like [Vitis vinifera] gi|297745434|emb|CBI40514.3| unnamed protein product [Vitis vinifera] Length = 295 Score = 55.5 bits (132), Expect = 5e-06 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +1 Query: 22 WEY*EIGSHEINKHTDGATGGIFDIKHLKDPSTA 123 WEY IGSH+I KH DGA+ GIFDIKHL D ST+ Sbjct: 199 WEYQIIGSHDIKKHADGASAGIFDIKHLNDSSTS 232 >ref|XP_002281745.1| PREDICTED: probable F-box protein At3g61730 [Vitis vinifera] gi|297745436|emb|CBI40516.3| unnamed protein product [Vitis vinifera] Length = 295 Score = 55.5 bits (132), Expect = 5e-06 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +1 Query: 22 WEY*EIGSHEINKHTDGATGGIFDIKHLKDPSTA 123 WEY IGSH+I KH DGA+ GIFDIKHL D ST+ Sbjct: 199 WEYRIIGSHDIKKHADGASAGIFDIKHLNDSSTS 232 >ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|223536060|gb|EEF37718.1| ATATH13, putative [Ricinus communis] Length = 603 Score = 55.1 bits (131), Expect = 6e-06 Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Frame = +1 Query: 82 GIFDIKHLKDPSTAGMKAEISSSVECSLLEFFKPSAMREGRTTAECILRLAKQK-YPDLN 258 GIF K GM AE+S S +LLEFFK A R+GRT AEC LRL+KQ+ P+ Sbjct: 449 GIFKSKPHVVFLDVGMTAELSRSDRVNLLEFFKSVARRDGRTAAECALRLSKQQNCPNPK 508 Query: 259 AFIE 270 AFIE Sbjct: 509 AFIE 512 >ref|XP_003608270.1| aarF domain-containing protein kinase, putative [Medicago truncatula] gi|87240485|gb|ABD32343.1| Protein kinase-like [Medicago truncatula] gi|355509325|gb|AES90467.1| aarF domain-containing protein kinase, putative [Medicago truncatula] Length = 630 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%) Frame = +1 Query: 124 GMKAEISSSVECSLLEFFKPSAMREGRTTAECILRLAKQK-YPDLNAFIE 270 GM AE+S S +L+EFFK A R+GRT AEC LRL+KQ+ PD A+IE Sbjct: 490 GMTAELSGSDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPDPKAYIE 539