BLASTX nr result

ID: Coptis23_contig00020161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020161
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633984.1| PREDICTED: probable F-box protein At3g61730-...    55   5e-06
ref|XP_002281745.1| PREDICTED: probable F-box protein At3g61730 ...    55   5e-06
ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|2235...    55   6e-06
ref|XP_003608270.1| aarF domain-containing protein kinase, putat...    55   8e-06

>ref|XP_003633984.1| PREDICTED: probable F-box protein At3g61730-like [Vitis vinifera]
           gi|297745434|emb|CBI40514.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 22  WEY*EIGSHEINKHTDGATGGIFDIKHLKDPSTA 123
           WEY  IGSH+I KH DGA+ GIFDIKHL D ST+
Sbjct: 199 WEYQIIGSHDIKKHADGASAGIFDIKHLNDSSTS 232


>ref|XP_002281745.1| PREDICTED: probable F-box protein At3g61730 [Vitis vinifera]
           gi|297745436|emb|CBI40516.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 22  WEY*EIGSHEINKHTDGATGGIFDIKHLKDPSTA 123
           WEY  IGSH+I KH DGA+ GIFDIKHL D ST+
Sbjct: 199 WEYRIIGSHDIKKHADGASAGIFDIKHLNDSSTS 232


>ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|223536060|gb|EEF37718.1|
           ATATH13, putative [Ricinus communis]
          Length = 603

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +1

Query: 82  GIFDIKHLKDPSTAGMKAEISSSVECSLLEFFKPSAMREGRTTAECILRLAKQK-YPDLN 258
           GIF  K        GM AE+S S   +LLEFFK  A R+GRT AEC LRL+KQ+  P+  
Sbjct: 449 GIFKSKPHVVFLDVGMTAELSRSDRVNLLEFFKSVARRDGRTAAECALRLSKQQNCPNPK 508

Query: 259 AFIE 270
           AFIE
Sbjct: 509 AFIE 512


>ref|XP_003608270.1| aarF domain-containing protein kinase, putative [Medicago
           truncatula] gi|87240485|gb|ABD32343.1| Protein
           kinase-like [Medicago truncatula]
           gi|355509325|gb|AES90467.1| aarF domain-containing
           protein kinase, putative [Medicago truncatula]
          Length = 630

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = +1

Query: 124 GMKAEISSSVECSLLEFFKPSAMREGRTTAECILRLAKQK-YPDLNAFIE 270
           GM AE+S S   +L+EFFK  A R+GRT AEC LRL+KQ+  PD  A+IE
Sbjct: 490 GMTAELSGSDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPDPKAYIE 539


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