BLASTX nr result

ID: Coptis23_contig00020160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020160
         (1997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...   112   5e-24
emb|CAN77551.1| hypothetical protein VITISV_017395 [Vitis vinifera]   111   6e-22
ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257...   111   8e-22
ref|XP_002513023.1| hypothetical protein RCOM_1451930 [Ricinus c...   110   1e-21
ref|XP_002276393.1| PREDICTED: uncharacterized protein LOC100240...   110   1e-21

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score =  112 bits (280), Expect(2) = 5e-24
 Identities = 55/161 (34%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
 Frame = -3

Query: 1971 VSKHIVITSTDTPDEVLCLFKSHGFMESSISLLIRRYPSVLFYDPDEIIRPRLEYFQGIG 1792
            V++ + I +T  PD V+ LFKS+GF  + I+ ++ + PS+L  +P + + P+L++    G
Sbjct: 47   VAEKLNIKTTTRPDSVVQLFKSYGFTPTHIATIVSKLPSLLLANPVKTLAPKLQFLSNNG 106

Query: 1791 ISGPKLGRLVSNDIGIFNRSLEDHIIPSVNYLRSFLPNQNQFTALVI--RWSWVLHEPER 1618
            +SG  L  +VS +  I  RSL++ IIP +++L+  LP  ++  +L+   R +WV+++   
Sbjct: 107  VSGSSLVNIVSTNPVILRRSLQNQIIPCISFLKKVLPTDHKIASLLTAKRGTWVVYKFSE 166

Query: 1617 VMGKNIKTLRECGCPEKHISQLMFWNPRNLCYNSDHFRELV 1495
             M  NI+TLR  G PE +I +++   PR L +N+D F+ ++
Sbjct: 167  QMVPNIETLRSHGVPESNILRMLILRPRTLSFNADEFKAIL 207



 Score = 26.9 bits (58), Expect(2) = 5e-24
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = -1

Query: 1403 EKPDW--RFCFFWSFSYWVDVVIFLFKNQPFFVVCLVMEMNPLVDIAI*TLNWTP 1245
            +K  W  +   F SF +  +  I LF  QP F+      +   +D  I  LNW P
Sbjct: 233  KKAKWESKVSVFRSFGWGEEEFIALFVKQPQFMSNSETRIRKCLDFLINELNWMP 287


>emb|CAN77551.1| hypothetical protein VITISV_017395 [Vitis vinifera]
          Length = 296

 Score =  111 bits (278), Expect = 6e-22
 Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
 Frame = -3

Query: 1995 LSPREAHKVSKHIVITSTDTPDEVLCLFKSHGFMESSISLLIRRYPSVLFYDPDEIIRPR 1816
            LS ++A   SK +   + + PD VL  F SHGF +S  S +++  P +L  DPD+ + P+
Sbjct: 66   LSHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPK 125

Query: 1815 LEYFQGIGISGPKLGRLVSNDIGIFNRSLEDHIIPSVNYLRSFLPNQNQFTALVIRWSWV 1636
            L++F   G S P + ++V +  GI  RSLE+ IIPS N+L+ FL +      +V R+S +
Sbjct: 126  LQFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRI 185

Query: 1635 -LHEPERVMGKNIKTLRECGCPEKHISQLMFWNPRNLCYNSDHFRELVFDIIKGLGVRPH 1459
             L +    +  N+  L+E G P+ +I+ L+ + P     N + FR+ + ++ K +G  P 
Sbjct: 186  LLFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVTK-MGFNPS 244

Query: 1458 SSYFMVRL 1435
               F++ +
Sbjct: 245  QMKFVLAI 252


>ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257952 [Vitis vinifera]
          Length = 389

 Score =  111 bits (277), Expect = 8e-22
 Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
 Frame = -3

Query: 1995 LSPREAHKVSKHIVITSTDTPDEVLCLFKSHGFMESSISLLIRRYPSVLFYDPDEIIRPR 1816
            LS ++A   SK +   + + PD VL  F SHGF +S  S +++  P +L  DPD+ + P+
Sbjct: 66   LSHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPK 125

Query: 1815 LEYFQGIGISGPKLGRLVSNDIGIFNRSLEDHIIPSVNYLRSFLPNQNQFTALVIRWSWV 1636
            L++F   G S P + ++V +  GI  RSLE+ IIPS N+L+ FL +      +V R+S +
Sbjct: 126  LQFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRI 185

Query: 1635 -LHEPERVMGKNIKTLRECGCPEKHISQLMFWNPRNLCYNSDHFRELVFDIIKGLGVRPH 1459
             L +    +  N+  L+E G P+ +I+ L+ + P     N + FR+ + + +K +G  P 
Sbjct: 186  LLFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNL-EEVKKMGFNPS 244

Query: 1458 SSYFMVRL 1435
               F++ +
Sbjct: 245  QMKFVLAI 252


>ref|XP_002513023.1| hypothetical protein RCOM_1451930 [Ricinus communis]
            gi|223548034|gb|EEF49526.1| hypothetical protein
            RCOM_1451930 [Ricinus communis]
          Length = 1025

 Score =  110 bits (276), Expect = 1e-21
 Identities = 65/197 (32%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
 Frame = -3

Query: 1992 SPREAHKVSKHIVITSTDTPDEVLCLFKSHGFMESSISLLIRRYPSVLFYDPDEIIRPRL 1813
            SP  A  +SK +   + + PD VL  FK+ GF +S IS +IR+YP +L  +P++ I P++
Sbjct: 52   SPESAVSISKSVSFENPEKPDLVLSFFKNLGFSKSQISEIIRKYPRILSPNPEKAIFPKV 111

Query: 1812 EYFQGIGISGPKLGRLVSNDIGIFNRSLEDHIIPSVNYLRSFLPNQNQFTALVIRWSWVL 1633
            E+F+  G S P L R+ S    +F RSL++ ++PS N+ R F  +  +  A + R+  +L
Sbjct: 112  EFFRSKGASTPDLIRIFSCYPWLFTRSLDNQLVPSFNFFRDFHQSDEKTIAAIKRYPNIL 171

Query: 1632 -HEPERVMGKNIKTLRECGCPEKHISQLMFWNPRNLCYNSDHFRELVFDIIKGLGVRPHS 1456
                E  +  NI TL+E G P  +I  L+ ++P+ +   +D F+++V + +K +G  P  
Sbjct: 172  ARRLETAVIPNINTLQENGVPAANILLLVRYHPQKIEMETDKFKKIV-EEVKIMGFDPLK 230

Query: 1455 SYFMVRLNHLLTAQRGV 1405
            S F++ +  L+   R +
Sbjct: 231  SQFVLAIMVLIGTSRSM 247



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
 Frame = -3

Query: 1980 AHKVSKHIVITSTDTPDEVLCLFKSHGFMESSISLLIRRYPSVLFYDPDEIIRPRLEYFQ 1801
            A  +SK +       PD  L  FK+ GF ++ IS + R+ P  L  + ++ I P++E+F 
Sbjct: 480  ALSISKRVNFEDPKIPDLFLSFFKNLGFSQTQISKITRKSPQTLSANLEKSIFPKVEFFI 539

Query: 1800 GIGISGPKLGRLVSNDIGIFNRSLEDHIIPSVNYLRSFLPNQNQFTALVIRWSWVLH-EP 1624
              G S   L R+ +    +F RSLE+ +IPS N+ R F  +  +    + R+  +L  + 
Sbjct: 540  SKGASTTGLIRIFTLYPWLFRRSLENQLIPSFNFFRDFHHSDGKTITAIKRFPHILMLQL 599

Query: 1623 ERVMGKNIKTLRECGCPEKHISQLMFWNPRNLCYNSDHFRELVFDIIKGLGVRPHSSYFM 1444
            E  +  NI TLRE G P   +S  +   P+ +   +D  +++V + +K +G  P  S F+
Sbjct: 600  EADVTPNINTLREYGVPASKVSLFVHCFPQLIGTRADMSKKIV-EEVKKMGFDPSKSKFV 658

Query: 1443 VRLNHLLTAQRGV 1405
            V +  L    R +
Sbjct: 659  VAITVLTGTSRSM 671


>ref|XP_002276393.1| PREDICTED: uncharacterized protein LOC100240766 [Vitis vinifera]
          Length = 384

 Score =  110 bits (275), Expect = 1e-21
 Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
 Frame = -3

Query: 1992 SPREAHKVSKHIVITSTDTPDEVLCLFKSHGFMESSISLLIRRYPSVLFYDPDEIIRPRL 1813
            S + A   SK++   + + P+ V   F SHGF ES  S ++R  P +L  DPD+ + P+L
Sbjct: 60   SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLPKL 119

Query: 1812 EYFQGIGISGPKLGRLVSNDIGIFNRSLEDHIIPSVNYLRSFLPNQNQFTALVIRWSWVL 1633
             +F   G S P + +++++   I  RSLE+ IIPS N+ + F  ++    A V R+S VL
Sbjct: 120  HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEVTMATVKRFSRVL 179

Query: 1632 -HEPERVMGKNIKTLRECGCPEKHISQLMFWNPRNLCYNSDHFRELVFDIIKGLGVRPHS 1456
               P   +  NI  L+E G P+ +I+ L+   PR      +HFRE + + +K +G  P  
Sbjct: 180  IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFRE-ILEEVKKMGFDPSK 238

Query: 1455 SYF 1447
            + F
Sbjct: 239  TRF 241


Top