BLASTX nr result

ID: Coptis23_contig00020144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020144
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplast...   144   2e-58
ref|XP_002530507.1| bacteriochlorophyll synthase, putative [Rici...   145   2e-58
ref|XP_002308227.1| predicted protein [Populus trichocarpa] gi|1...   144   3e-58
gb|ACN41022.1| unknown [Picea sitchensis]                             144   1e-57
gb|ABR18193.1| unknown [Picea sitchensis]                             144   1e-57

>ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplastic [Vitis vinifera]
           gi|296083177|emb|CBI22813.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score =  144 bits (364), Expect(2) = 2e-58
 Identities = 71/90 (78%), Positives = 76/90 (84%)
 Frame = -2

Query: 600 NFALGASYISLPWWAGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQS 421
           NFALGASYISLPWWAGQ+LFG           LYSIAGLGIAI+NDFKS+EGDRA+GLQS
Sbjct: 223 NFALGASYISLPWWAGQALFGTLNPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQS 282

Query: 420 LPVAFGVDAAKWICVGAIDITQLSVAAYLL 331
           LPVAFG + AKWICVGAIDITQLSVA YLL
Sbjct: 283 LPVAFGAETAKWICVGAIDITQLSVAGYLL 312



 Score =  107 bits (266), Expect(2) = 2e-58
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = -1

Query: 244 SGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFLVLGILVTALATSH 74
           +GK YYALAL+GLIIPQV+FQFQYFLKDP KYDVKYQASAQPFLVLG+LVTALATSH
Sbjct: 314 AGKPYYALALVGLIIPQVIFQFQYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 370


>ref|XP_002530507.1| bacteriochlorophyll synthase, putative [Ricinus communis]
           gi|223529964|gb|EEF31891.1| bacteriochlorophyll
           synthase, putative [Ricinus communis]
          Length = 344

 Score =  145 bits (366), Expect(2) = 2e-58
 Identities = 72/90 (80%), Positives = 76/90 (84%)
 Frame = -2

Query: 600 NFALGASYISLPWWAGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQS 421
           NFALGASYISLPWWAGQ+LFG           LYSIAGLGIAI+NDFKSIEGDRAMGLQS
Sbjct: 197 NFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRAMGLQS 256

Query: 420 LPVAFGVDAAKWICVGAIDITQLSVAAYLL 331
           LPVAFG + AKWICVGAIDITQ+SVA YLL
Sbjct: 257 LPVAFGAETAKWICVGAIDITQISVAGYLL 286



 Score =  106 bits (264), Expect(2) = 2e-58
 Identities = 52/57 (91%), Positives = 54/57 (94%)
 Frame = -1

Query: 244 SGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFLVLGILVTALATSH 74
           +GK YYALALL LIIPQVVFQFQYFLKDP KYDVKYQASAQPFLVLG+LVTALATSH
Sbjct: 288 AGKPYYALALLALIIPQVVFQFQYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 344


>ref|XP_002308227.1| predicted protein [Populus trichocarpa] gi|118486377|gb|ABK95029.1|
           unknown [Populus trichocarpa]
           gi|222854203|gb|EEE91750.1| predicted protein [Populus
           trichocarpa]
          Length = 372

 Score =  144 bits (364), Expect(2) = 3e-58
 Identities = 71/90 (78%), Positives = 76/90 (84%)
 Frame = -2

Query: 600 NFALGASYISLPWWAGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQS 421
           NFALGASYISLPWWAGQ+LFG           LYSIAGLGIAI+NDFKSIEGDRA+GLQS
Sbjct: 225 NFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRALGLQS 284

Query: 420 LPVAFGVDAAKWICVGAIDITQLSVAAYLL 331
           LPVAFG + AKWICVGAIDITQLS+A YLL
Sbjct: 285 LPVAFGAETAKWICVGAIDITQLSIAGYLL 314



 Score =  106 bits (265), Expect(2) = 3e-58
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = -1

Query: 241 GKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFLVLGILVTALATSH 74
           GK YYALAL+GLIIPQ+VFQFQYFLKDP KYDVKYQASAQPFLVLG+LVTALATSH
Sbjct: 317 GKPYYALALVGLIIPQIVFQFQYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 372


>gb|ACN41022.1| unknown [Picea sitchensis]
          Length = 388

 Score =  144 bits (364), Expect(2) = 1e-57
 Identities = 72/89 (80%), Positives = 75/89 (84%)
 Frame = -2

Query: 600 NFALGASYISLPWWAGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQS 421
           NFALG+SYI LPWWAGQ+LFG           LYSIAGLGIAIINDFKSIEGDRAMGLQS
Sbjct: 241 NFALGSSYICLPWWAGQALFGTLKPDIMVLTVLYSIAGLGIAIINDFKSIEGDRAMGLQS 300

Query: 420 LPVAFGVDAAKWICVGAIDITQLSVAAYL 334
           LPVAFGVD AKWICVGAIDITQLS+A YL
Sbjct: 301 LPVAFGVDTAKWICVGAIDITQLSIAGYL 329



 Score =  104 bits (259), Expect(2) = 1e-57
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -1

Query: 244 SGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFLVLGILVTALATSH 74
           +GKQYYALALLGLI PQ++ QFQYFLKDP KYDVKYQASAQPFLVLG+L TALATSH
Sbjct: 332 TGKQYYALALLGLITPQIILQFQYFLKDPIKYDVKYQASAQPFLVLGLLCTALATSH 388


>gb|ABR18193.1| unknown [Picea sitchensis]
          Length = 388

 Score =  144 bits (364), Expect(2) = 1e-57
 Identities = 72/89 (80%), Positives = 75/89 (84%)
 Frame = -2

Query: 600 NFALGASYISLPWWAGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQS 421
           NFALG+SYI LPWWAGQ+LFG           LYSIAGLGIAIINDFKSIEGDRAMGLQS
Sbjct: 241 NFALGSSYICLPWWAGQALFGTLKPDIMVLTVLYSIAGLGIAIINDFKSIEGDRAMGLQS 300

Query: 420 LPVAFGVDAAKWICVGAIDITQLSVAAYL 334
           LPVAFGVD AKWICVGAIDITQLS+A YL
Sbjct: 301 LPVAFGVDTAKWICVGAIDITQLSIAGYL 329



 Score =  104 bits (259), Expect(2) = 1e-57
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -1

Query: 244 SGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFLVLGILVTALATSH 74
           +GKQYYALALLGLI PQ++ QFQYFLKDP KYDVKYQASAQPFLVLG+L TALATSH
Sbjct: 332 TGKQYYALALLGLITPQIILQFQYFLKDPIKYDVKYQASAQPFLVLGLLCTALATSH 388


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