BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020131
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...   276   2e-72
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   276   2e-72
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   276   4e-72
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   270   2e-70
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat...   265   5e-69

>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  276 bits (707), Expect = 2e-72
 Identities = 145/228 (63%), Positives = 174/228 (76%), Gaps = 9/228 (3%)
 Frame = -2

Query: 659 MEVSCLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSHDEAVEILKTASHSHRFD 480
           ME+  LP+S S+R KL++AGYTT         +HLARD+ VS  EA+EIL  A+ S   D
Sbjct: 1   MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLARDIEVSESEALEILNFATRSSDLD 60

Query: 479 PLIITNNSKTNA-IVPGAQTAWEMLSEEEYSTRITTSCEDLDNILGGGISCKEVTEIGGV 303
                 +S +NA ++ G QTAW+ML+EE +S+ ITTSC DLDNILGGGI+CKEVTEIGGV
Sbjct: 61  -----KSSGSNANVIHGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGV 115

Query: 302 PGIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTEGSFMVERVFQIAEACIEDLLE--GH 129
           PGIGKTQ+GIQLAVNVQIP+D GGLGGKAIY+DTEGSFMVERV QIAEACIEDL E   H
Sbjct: 116 PGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDLSEYSHH 175

Query: 128 ACKD------QMQPKTFLSNIFYFRICSYTEQIALINYLEKFIAENRD 3
             KD      +M P + L NIFYFR+CSYTEQIAL+NYL+KF+ E++D
Sbjct: 176 FYKDNQAFGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKD 223


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  276 bits (707), Expect = 2e-72
 Identities = 143/227 (62%), Positives = 174/227 (76%), Gaps = 8/227 (3%)
 Frame = -2

Query: 659 MEVSCLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSHDEAVEILKTASHSHRFD 480
           ME+  LP+S S+R KL++AGYTT         +HL RD+ VS  EA+EIL  A+ S+  D
Sbjct: 1   MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLVRDIEVSESEALEILNFATRSNDLD 60

Query: 479 PLIITNNSKTNAIVPGAQTAWEMLSEEEYSTRITTSCEDLDNILGGGISCKEVTEIGGVP 300
               ++ S TN ++ G QTAW+ML+EE +S+ ITTSC DLDNILGGGI+CKEVTEIGGVP
Sbjct: 61  K---SSGSNTN-VIDGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVP 116

Query: 299 GIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTEGSFMVERVFQIAEACIEDLLE--GHA 126
           GIGKTQ+GIQLAVNVQIP+D GGLGGKAIY+DTEGSFMVERV QIAEACIED+ E   H 
Sbjct: 117 GIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHF 176

Query: 125 CKD------QMQPKTFLSNIFYFRICSYTEQIALINYLEKFIAENRD 3
            KD      +M P + L NIFYFR+CSYTEQIAL+NYL+KF+ E++D
Sbjct: 177 HKDNQAFGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKD 223


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  276 bits (705), Expect = 4e-72
 Identities = 145/227 (63%), Positives = 168/227 (74%), Gaps = 8/227 (3%)
 Frame = -2

Query: 659 MEVSCLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSHDEAVEILKTASHSHRFD 480
           MEVS LPLS SQR KL+ AGYT+         S LARDL +S  EA+EILK AS + R D
Sbjct: 1   MEVSRLPLSASQRGKLILAGYTSLSSLSSVSPSDLARDLKISDSEALEILKVASRNSRLD 60

Query: 479 PLIITNNSKTNAIVPGAQTAWEMLSEEEYSTRITTSCEDLDNILGGGISCKEVTEIGGVP 300
            +        +A++ GAQ AWEML EE   TRITTSC DLDNILGGGI+CKEVTEIGG+P
Sbjct: 61  GM-----EGCHAVINGAQNAWEMLHEESSLTRITTSCADLDNILGGGITCKEVTEIGGLP 115

Query: 299 GIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTEGSFMVERVFQIAEACIEDLLEG---- 132
           GIGKTQLGIQLAVNVQIP  CGGLGGKA+Y+DTEGSFMVERV Q+AEA +ED+LE     
Sbjct: 116 GIGKTQLGIQLAVNVQIPPYCGGLGGKAVYIDTEGSFMVERVLQVAEASVEDMLEYSRFL 175

Query: 131 ----HACKDQMQPKTFLSNIFYFRICSYTEQIALINYLEKFIAENRD 3
                 C+   Q K  L NI+YFR+CSYTEQ+AL+NYLEKFI+E+RD
Sbjct: 176 RRDLQTCQVATQSKDILENIYYFRVCSYTEQVALVNYLEKFISEHRD 222


>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  270 bits (690), Expect = 2e-70
 Identities = 143/227 (62%), Positives = 171/227 (75%), Gaps = 8/227 (3%)
 Frame = -2

Query: 659 MEVSCLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSHDEAVEILKTASHSHRFD 480
           ME++ LP+S SQR KL+SAGYT+         S LA+DL +S +EA+EIL+  S   R D
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 479 PLIITNNSKTNAIVPGAQTAWEMLSEEEYSTRITTSCEDLDNILGGGISCKEVTEIGGVP 300
                    ++AIV GAQTAW+ML EEE    ITTSC DLD+ILGGGI CKEVTEIGGVP
Sbjct: 61  -----KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVP 115

Query: 299 GIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTEGSFMVERVFQIAEACIEDL------- 141
           GIGKTQLGIQLAVNVQIPV+ GGLGGKAIY+DTEGSFM+ER  QIAEACIED+       
Sbjct: 116 GIGKTQLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFL 175

Query: 140 -LEGHACKDQMQPKTFLSNIFYFRICSYTEQIALINYLEKFIAENRD 3
             +  +C+ + QPK FL NIFYFR+CSYTEQIA+INYL+KFI+E++D
Sbjct: 176 QKDFQSCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKD 222


>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
           [Arabidopsis thaliana]
          Length = 342

 Score =  265 bits (678), Expect = 5e-69
 Identities = 142/227 (62%), Positives = 169/227 (74%), Gaps = 8/227 (3%)
 Frame = -2

Query: 659 MEVSCLPLSPSQRSKLVSAGYTTXXXXXXXXXSHLARDLNVSHDEAVEILKTASHSHRFD 480
           ME   LPLSPS R KL+SAGYT          S LARD N++ +EA EILK A+ S    
Sbjct: 1   MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQS---- 56

Query: 479 PLIITNNSKTNAIVPGAQTAWEMLSEEEYSTRITTSCEDLDNILGGGISCKEVTEIGGVP 300
                N S++  ++ GA+ AW+ML EEE   RITTSC DLDNILGGGISC++VTEIGGVP
Sbjct: 57  ---CCNGSRS--LINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVP 111

Query: 299 GIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTEGSFMVERVFQIAEACIEDLLE--GHA 126
           GIGKTQ+GIQL+VNVQIP +CGGLGGKAIY+DTEGSFMVER  QIAEAC+ED+ E  G+ 
Sbjct: 112 GIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYM 171

Query: 125 CKD------QMQPKTFLSNIFYFRICSYTEQIALINYLEKFIAENRD 3
            K       QM+P+  L NIFYFR+CSYTEQIAL+N+LEKFI+EN+D
Sbjct: 172 HKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKD 218