BLASTX nr result

ID: Coptis23_contig00020130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020130
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270167.1| PREDICTED: uncharacterized protein LOC100240...   189   5e-46
ref|XP_002520693.1| conserved hypothetical protein [Ricinus comm...   181   8e-44
ref|XP_002320369.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|XP_002872793.1| hypothetical protein ARALYDRAFT_911887 [Arab...   172   5e-41
ref|XP_004158948.1| PREDICTED: uncharacterized LOC101222027 [Cuc...   168   1e-39

>ref|XP_002270167.1| PREDICTED: uncharacterized protein LOC100240762 [Vitis vinifera]
           gi|296086638|emb|CBI32273.3| unnamed protein product
           [Vitis vinifera]
          Length = 180

 Score =  189 bits (479), Expect = 5e-46
 Identities = 97/135 (71%), Positives = 109/135 (80%), Gaps = 3/135 (2%)
 Frame = -2

Query: 597 PSLSKLRPFSISNPQCLNDE---EEGGPQGLVQDLRVPDHWLVPAKALQESEWLRITLHK 427
           P    LR  S+   Q  +D    EEG  + LVQDLRVPDHWL P+KAL+ESEWLR+TLHK
Sbjct: 46  PLKGHLRNRSVPRSQSSSDPQSYEEGDEETLVQDLRVPDHWLNPSKALEESEWLRVTLHK 105

Query: 426 WLDDEYCPETTNEEISKVAANSYYDSLVVKRSDLGEILLKIARDLESISYQESFHGAFSS 247
           WLDDEYCPE TN EIS+VAANSYY SLV K++DLGEILLK+AR+LESISYQESFHGAFSS
Sbjct: 106 WLDDEYCPEATNIEISRVAANSYYRSLVEKQTDLGEILLKMARELESISYQESFHGAFSS 165

Query: 246 ANAAVSLIVGRIEQE 202
           ANAAV LI  RIEQ+
Sbjct: 166 ANAAVDLIAQRIEQD 180


>ref|XP_002520693.1| conserved hypothetical protein [Ricinus communis]
           gi|223540078|gb|EEF41655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  181 bits (460), Expect = 8e-44
 Identities = 90/120 (75%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
 Frame = -2

Query: 564 SNPQCLNDE-EEGGPQGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEYCPETTNE 388
           SNPQ  + + +E  P+  V+ LRVPDHWL+P  ALQESEWLR+TLHKWLDDEYCPE TN 
Sbjct: 59  SNPQNSSQQGDENDPESHVETLRVPDHWLLPPNALQESEWLRVTLHKWLDDEYCPEETNI 118

Query: 387 EISKVAANSYYDSLVVKRSDLGEILLKIARDLESISYQESFHGAFSSANAAVSLIVGRIE 208
           EISKVAA SYY+ LV KR+DLGEILL++ARDLESISYQESFHGAFSSANAAV+LI  RIE
Sbjct: 119 EISKVAARSYYECLVEKRNDLGEILLRMARDLESISYQESFHGAFSSANAAVNLIAQRIE 178


>ref|XP_002320369.1| predicted protein [Populus trichocarpa] gi|222861142|gb|EEE98684.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  174 bits (441), Expect = 1e-41
 Identities = 87/125 (69%), Positives = 105/125 (84%), Gaps = 4/125 (3%)
 Frame = -2

Query: 570 SISNPQCLNDEEEGGP----QGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEYCP 403
           S S PQ  N +E+G      + LVQDLRVP HWL+P+KA++ES+WL++TLHKWLDDEYCP
Sbjct: 74  SFSTPQ--NSQEDGDDDEEEESLVQDLRVPTHWLLPSKAMEESQWLKVTLHKWLDDEYCP 131

Query: 402 ETTNEEISKVAANSYYDSLVVKRSDLGEILLKIARDLESISYQESFHGAFSSANAAVSLI 223
           E TN EISKVAA SYY+SL+ K++DLG ILL +AR+LESISY+ESFHGAFSSANAAV+LI
Sbjct: 132 EETNVEISKVAAQSYYESLLEKQTDLGVILLNMARNLESISYKESFHGAFSSANAAVNLI 191

Query: 222 VGRIE 208
           V RIE
Sbjct: 192 VQRIE 196


>ref|XP_002872793.1| hypothetical protein ARALYDRAFT_911887 [Arabidopsis lyrata subsp.
           lyrata] gi|297318630|gb|EFH49052.1| hypothetical protein
           ARALYDRAFT_911887 [Arabidopsis lyrata subsp. lyrata]
          Length = 174

 Score =  172 bits (436), Expect = 5e-41
 Identities = 86/142 (60%), Positives = 107/142 (75%)
 Frame = -2

Query: 624 PVSLWILNHPSLSKLRPFSISNPQCLNDEEEGGPQGLVQDLRVPDHWLVPAKALQESEWL 445
           PVS  I + P    L+   + N Q    E E G +  VQ L +P+ WL+P++A++ESEWL
Sbjct: 35  PVSFPITSAPKFPSLK---LRNSQSSTHEGEEGSESSVQALTIPEEWLLPSRAIEESEWL 91

Query: 444 RITLHKWLDDEYCPETTNEEISKVAANSYYDSLVVKRSDLGEILLKIARDLESISYQESF 265
           R+TLHKWLDDEYCPE TN EIS+VAA SYY SL+ K +D+GEILLK+A+DL SISYQESF
Sbjct: 92  RVTLHKWLDDEYCPEPTNVEISEVAAKSYYSSLLEKETDMGEILLKMAQDLTSISYQESF 151

Query: 264 HGAFSSANAAVSLIVGRIEQEL 199
           HGAF+SANAA++LIV RIE  L
Sbjct: 152 HGAFTSANAAINLIVDRIETGL 173


>ref|XP_004158948.1| PREDICTED: uncharacterized LOC101222027 [Cucumis sativus]
          Length = 155

 Score =  168 bits (425), Expect = 1e-39
 Identities = 81/111 (72%), Positives = 96/111 (86%)
 Frame = -2

Query: 540 EEEGGPQGLVQDLRVPDHWLVPAKALQESEWLRITLHKWLDDEYCPETTNEEISKVAANS 361
           EE+  P+  V+ LRVPD W VP+KAL+ESEWLR+TLHKWLD+EYCPE TN +ISKVAA S
Sbjct: 43  EEDDDPELEVESLRVPDEWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVDISKVAAKS 102

Query: 360 YYDSLVVKRSDLGEILLKIARDLESISYQESFHGAFSSANAAVSLIVGRIE 208
           YY+SL+ K +DLGEILL +AR+LESISY+ESFHGAFSSANAAV+LI  RIE
Sbjct: 103 YYNSLLKKTTDLGEILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 153


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