BLASTX nr result

ID: Coptis23_contig00020121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020121
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245...   151   5e-35
emb|CBI18619.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002509994.1| protein binding protein, putative [Ricinus c...   146   1e-33
ref|XP_002302350.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002285586.2| PREDICTED: uncharacterized protein LOC100253...   137   1e-30

>ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245763 [Vitis vinifera]
          Length = 725

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/112 (66%), Positives = 87/112 (77%)
 Frame = -3

Query: 336 VQDLRLNLGFSSGSTPAEITAVYSCNGRPAFLGSGSVRLGDLYAXXXXXXXXXLKVPMVP 157
           VQDLR+ LGF+SGS PAEI AVY C GRP  +GSGSVRLGDLYA         LKVP   
Sbjct: 495 VQDLRVQLGFASGSAPAEIAAVYCCTGRPNLMGSGSVRLGDLYAEDERELLVELKVPTSA 554

Query: 156 VGAHHVMSVKCCYKDPVTQELIQCKEQALLVPRPHAVRSSDPKIERLRSLFV 1
           +GAHHV+SV+C YKDP +Q+LI  KEQALLVPRPHAVRS+ P IERLR+L++
Sbjct: 555 IGAHHVLSVRCSYKDPSSQQLIYGKEQALLVPRPHAVRSAGPHIERLRNLYI 606


>emb|CBI18619.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/112 (66%), Positives = 87/112 (77%)
 Frame = -3

Query: 336 VQDLRLNLGFSSGSTPAEITAVYSCNGRPAFLGSGSVRLGDLYAXXXXXXXXXLKVPMVP 157
           VQDLR+ LGF+SGS PAEI AVY C GRP  +GSGSVRLGDLYA         LKVP   
Sbjct: 426 VQDLRVQLGFASGSAPAEIAAVYCCTGRPNLMGSGSVRLGDLYAEDERELLVELKVPTSA 485

Query: 156 VGAHHVMSVKCCYKDPVTQELIQCKEQALLVPRPHAVRSSDPKIERLRSLFV 1
           +GAHHV+SV+C YKDP +Q+LI  KEQALLVPRPHAVRS+ P IERLR+L++
Sbjct: 486 IGAHHVLSVRCSYKDPSSQQLIYGKEQALLVPRPHAVRSAGPHIERLRNLYI 537


>ref|XP_002509994.1| protein binding protein, putative [Ricinus communis]
           gi|223550695|gb|EEF52181.1| protein binding protein,
           putative [Ricinus communis]
          Length = 767

 Score =  146 bits (369), Expect = 1e-33
 Identities = 72/112 (64%), Positives = 85/112 (75%)
 Frame = -3

Query: 336 VQDLRLNLGFSSGSTPAEITAVYSCNGRPAFLGSGSVRLGDLYAXXXXXXXXXLKVPMVP 157
           VQDLR+ LGF+SGS PAEI AVY+ N RP  L SGS+RLGDLYA         L+VP   
Sbjct: 528 VQDLRIQLGFASGSAPAEILAVYTYNSRPTVLSSGSIRLGDLYAEEERELLVELRVPSSA 587

Query: 156 VGAHHVMSVKCCYKDPVTQELIQCKEQALLVPRPHAVRSSDPKIERLRSLFV 1
            G+HHVMSV+C YKDP TQE++  ++Q LLVPRPHAVRSS PKIERLR+LF+
Sbjct: 588 AGSHHVMSVRCLYKDPATQEVVYGRDQTLLVPRPHAVRSSAPKIERLRNLFI 639


>ref|XP_002302350.1| predicted protein [Populus trichocarpa] gi|222844076|gb|EEE81623.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/112 (60%), Positives = 83/112 (74%)
 Frame = -3

Query: 336 VQDLRLNLGFSSGSTPAEITAVYSCNGRPAFLGSGSVRLGDLYAXXXXXXXXXLKVPMVP 157
           VQDLR+ LGF+S S PAEI AVY CN RP  LGSGSVRLGDLYA         L+VP   
Sbjct: 486 VQDLRIQLGFASSSAPAEIVAVYPCNSRPNVLGSGSVRLGDLYAEEERELLVELRVPQSA 545

Query: 156 VGAHHVMSVKCCYKDPVTQELIQCKEQALLVPRPHAVRSSDPKIERLRSLFV 1
           VG+HHVMS +C YKDP TQE++  ++Q+LLVPRPHA+ S+ PKI+ L +LF+
Sbjct: 546 VGSHHVMSARCLYKDPATQEVVYDRDQSLLVPRPHALPSTGPKIQHLSNLFI 597


>ref|XP_002285586.2| PREDICTED: uncharacterized protein LOC100253915 [Vitis vinifera]
          Length = 757

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/112 (60%), Positives = 80/112 (71%)
 Frame = -3

Query: 336 VQDLRLNLGFSSGSTPAEITAVYSCNGRPAFLGSGSVRLGDLYAXXXXXXXXXLKVPMVP 157
           VQDLR+ L F  GST AEIT VY CNGRP  L +GS+RLGDLYA         L+ P   
Sbjct: 526 VQDLRIQLSFVGGSTRAEITGVYLCNGRPTALNAGSIRLGDLYAEEERELLVELRAPASA 585

Query: 156 VGAHHVMSVKCCYKDPVTQELIQCKEQALLVPRPHAVRSSDPKIERLRSLFV 1
           VG HHVMSV+CCYKD  T+E++   EQALLVP+PH +RS  PKIERLR+LF+
Sbjct: 586 VGTHHVMSVRCCYKDSATKEMVYGNEQALLVPQPHTIRSG-PKIERLRNLFI 636


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