BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020118
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...   219   1e-54
emb|CBI22109.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51

>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score =  219 bits (557), Expect = 1e-54
 Identities = 109/189 (57%), Positives = 142/189 (75%)
 Frame = -2

Query: 995 LLKFVSEVLEMKCPKSTXXXXXXXIAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 816
           L+KFV EVLE+  P+S         AFAE +Q DKA++IFD +K L  KPD +TYN+V+ 
Sbjct: 205 LMKFVKEVLELAFPRSMVVINRIIFAFAECRQFDKALLIFDQIKDLEYKPDLITYNMVLH 264

Query: 815 ILGRAGWIDEMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENGIDL 636
           ILGRAG +DEML+ F+SMKE+ ++PD I YNTL+N  +K GRLDLC+V+++EM E+GI+ 
Sbjct: 265 ILGRAGRVDEMLYEFSSMKEAGIVPDFICYNTLLNQLQKAGRLDLCLVYIREMGESGIEA 324

Query: 635 DLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIYIYRSLISNSKKAEKLDLATSLL 456
           DL TYTA+I SFG+ GHI+E+L  F  MK R I PSIYIYRSLI+ +KK  K++LA +LL
Sbjct: 325 DLLTYTALIQSFGKSGHIEESLRLFDDMKTRQIRPSIYIYRSLINTAKKMGKVELAMTLL 384

Query: 455 EEMNFSVLN 429
           EEMN S  N
Sbjct: 385 EEMNASPPN 393


>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  214 bits (546), Expect = 2e-53
 Identities = 108/184 (58%), Positives = 140/184 (76%)
 Frame = -2

Query: 995 LLKFVSEVLEMKCPKSTXXXXXXXIAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 816
           LLKFV EV E+  P++         AFAE +QI+K+++IFD MK L CKPD +TYN V+ 
Sbjct: 186 LLKFVREVSELTFPRNATILNRIIHAFAECRQIEKSLIIFDHMKSLKCKPDLITYNTVLG 245

Query: 815 ILGRAGWIDEMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENGIDL 636
            LGRAG +DEMLH F+SMK +++ PDIISYNTL+NS +K+GRLDLC+VF +EM ENG+  
Sbjct: 246 FLGRAGRLDEMLHEFSSMKVANIAPDIISYNTLLNSLQKVGRLDLCLVFFREMGENGLKP 305

Query: 635 DLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIYIYRSLISNSKKAEKLDLATSLL 456
           DLRTY A+I+ FG+ G+++EAL  F +MK+  I PSIYIYRSLI+ SKK  K++LA SL 
Sbjct: 306 DLRTYRALIEGFGQSGNLEEALRLFSEMKQGQICPSIYIYRSLINYSKKMGKVELAMSLS 365

Query: 455 EEMN 444
           EEMN
Sbjct: 366 EEMN 369


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score =  214 bits (546), Expect = 2e-53
 Identities = 108/184 (58%), Positives = 140/184 (76%)
 Frame = -2

Query: 995 LLKFVSEVLEMKCPKSTXXXXXXXIAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 816
           LLKFV EV E+  P++         AFAE +QI+K+++IFD MK L CKPD +TYN V+ 
Sbjct: 157 LLKFVREVSELTFPRNATILNRIIHAFAECRQIEKSLIIFDHMKSLKCKPDLITYNTVLG 216

Query: 815 ILGRAGWIDEMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENGIDL 636
            LGRAG +DEMLH F+SMK +++ PDIISYNTL+NS +K+GRLDLC+VF +EM ENG+  
Sbjct: 217 FLGRAGRLDEMLHEFSSMKVANIAPDIISYNTLLNSLQKVGRLDLCLVFFREMGENGLKP 276

Query: 635 DLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIYIYRSLISNSKKAEKLDLATSLL 456
           DLRTY A+I+ FG+ G+++EAL  F +MK+  I PSIYIYRSLI+ SKK  K++LA SL 
Sbjct: 277 DLRTYRALIEGFGQSGNLEEALRLFSEMKQGQICPSIYIYRSLINYSKKMGKVELAMSLS 336

Query: 455 EEMN 444
           EEMN
Sbjct: 337 EEMN 340


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  211 bits (536), Expect = 3e-52
 Identities = 109/189 (57%), Positives = 138/189 (73%)
 Frame = -2

Query: 995 LLKFVSEVLEMKCPKSTXXXXXXXIAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 816
           LL+ V EV E+  P ST        AFAE  Q DKAI+IF+ M+ L CKPD VTYN V+D
Sbjct: 182 LLRLVKEVSELTFPSSTKVVNRFIFAFAECGQFDKAILIFEQMENLKCKPDLVTYNTVLD 241

Query: 815 ILGRAGWIDEMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENGIDL 636
           +LGRAG IDEML  FASMKE+ ++PD ISYNTL+N   K+GRLDLC V+ ++M  NGI+ 
Sbjct: 242 LLGRAGRIDEMLGEFASMKEAGILPDFISYNTLLNQLTKVGRLDLCSVYFRDMVGNGIEP 301

Query: 635 DLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIYIYRSLISNSKKAEKLDLATSLL 456
           DL TYTA+I SFG+ G+I+E+L  F +MK + I PSIYIYRSLI++ KK  K++LA + L
Sbjct: 302 DLLTYTALIWSFGQSGNIEESLRLFNEMKTKQIRPSIYIYRSLIASLKKMGKIELAMTFL 361

Query: 455 EEMNFSVLN 429
           EEMN S+ N
Sbjct: 362 EEMNASMSN 370


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  207 bits (526), Expect = 4e-51
 Identities = 108/189 (57%), Positives = 137/189 (72%)
 Frame = -2

Query: 995 LLKFVSEVLEMKCPKSTXXXXXXXIAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 816
           LL+ V EV EM  P S         AFAE  Q DKA++IF  M+ L CKPD VTYN V+D
Sbjct: 152 LLRLVKEVSEMTFPSSMMVVNRIIFAFAECGQFDKALLIFKQMENLKCKPDLVTYNTVLD 211

Query: 815 ILGRAGWIDEMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENGIDL 636
           +LG AG IDEML  FASMKE+ ++PD ISYNTL+N   K+GRLDLC V+ ++M E+GI+ 
Sbjct: 212 LLGHAGRIDEMLCEFASMKEAGILPDFISYNTLLNQLWKVGRLDLCSVYSRDMVESGIEP 271

Query: 635 DLRTYTAVIDSFGRLGHIKEALGYFGQMKRRGIHPSIYIYRSLISNSKKAEKLDLATSLL 456
           DL TYTA+I SFG+ G+I+E+L  F +MK + I PSIYIYRSLI++ KK  K++LA +LL
Sbjct: 272 DLLTYTALIGSFGQSGNIEESLRLFNEMKTKQIRPSIYIYRSLIASLKKMGKVELAMTLL 331

Query: 455 EEMNFSVLN 429
           EEMN S+ N
Sbjct: 332 EEMNASMSN 340



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 32/114 (28%), Positives = 53/114 (46%)
 Frame = -2

Query: 788 EMLHAFASMKESSLIPDIISYNTLINSFRKLGRLDLCVVFLQEMRENGIDLDLRTYTAVI 609
           ++L     + E +    ++  N +I +F + G+ D  ++  ++M       DL TY  V+
Sbjct: 151 QLLRLVKEVSEMTFPSSMMVVNRIIFAFAECGQFDKALLIFKQMENLKCKPDLVTYNTVL 210

Query: 608 DSFGRLGHIKEALGYFGQMKRRGIHPSIYIYRSLISNSKKAEKLDLATSLLEEM 447
           D  G  G I E L  F  MK  GI P    Y +L++   K  +LDL +    +M
Sbjct: 211 DLLGHAGRIDEMLCEFASMKEAGILPDFISYNTLLNQLWKVGRLDLCSVYSRDM 264