BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020117
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   615   e-174
ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   614   e-173
ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi...   604   e-170
ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isofor...   601   e-169
emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]   597   e-168

>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
            [Medicago truncatula]
          Length = 386

 Score =  615 bits (1586), Expect = e-174
 Identities = 285/371 (76%), Positives = 328/371 (88%)
 Frame = -3

Query: 1387 RINVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITW 1208
            +I VFW EGMLKH TG GVFDT  DPGFL +LEKHPENSDRVKNMVSILK+GPIS Y++W
Sbjct: 16   KIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNMVSILKRGPISPYVSW 75

Query: 1207 CPGRVAGVSELLSFHTQEYIEELIEADKAGGKTFCAGTILNPGSWNACLIAAGTTLSAMK 1028
              GR A + ELLSFHT EYI EL++ADK G K  CAGT LNPGSW+A L+AAGTTLS+MK
Sbjct: 76   HLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSWDAALLAAGTTLSSMK 135

Query: 1027 HILDGNGKIAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG 848
            H+LDG+GK+AYALVRPPGHHAQP+QADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG
Sbjct: 136  HLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG 195

Query: 847  NGTAQGFYQSNDVLTISLHMNHGSWGPSHPQNGSVNELGEGKGYGFNLNIPLPNGTGDQG 668
            NGTA+GFY SN+VLT+SLHMNHGSWGPSHPQ+GS++ELG+G+GYG+NLNIPLPNGTGD G
Sbjct: 196  NGTAEGFYSSNEVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYGYNLNIPLPNGTGDNG 255

Query: 667  YVYAMNELVVQAVDKFEPDMMVFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHS 488
            YVYA NELVV ++ KFEPDM+V V+GQDSS+FDPNGRQCLTMEGYREIGRIVH LA  HS
Sbjct: 256  YVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHS 315

Query: 487  KGRLLIVQEGGYHLTYAAYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQY 308
             GRLLIVQEGGYH+TY+AYCLHATLEG LNLP+ LL DP+AYYPED+  ++KV+++++ Y
Sbjct: 316  DGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNY 375

Query: 307  WNDNGLLFQRD 275
              D   L++ D
Sbjct: 376  VTDKMPLWKTD 386


>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi|87240922|gb|ABD32780.1|
            Histone deacetylase superfamily [Medicago truncatula]
            gi|355485930|gb|AES67133.1| Histone deacetylase [Medicago
            truncatula]
          Length = 386

 Score =  614 bits (1583), Expect = e-173
 Identities = 285/371 (76%), Positives = 327/371 (88%)
 Frame = -3

Query: 1387 RINVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITW 1208
            +I VFW EGMLKH TG GVFDT  DPGFL +LEKHPENSDRVKNMVSILK+GPIS Y++W
Sbjct: 16   KIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNMVSILKRGPISPYVSW 75

Query: 1207 CPGRVAGVSELLSFHTQEYIEELIEADKAGGKTFCAGTILNPGSWNACLIAAGTTLSAMK 1028
              GR A + ELLSFHT EYI EL++ADK G K  CAGT LNPGSW+A L+AAGTTLS+MK
Sbjct: 76   HLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSWDAALLAAGTTLSSMK 135

Query: 1027 HILDGNGKIAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG 848
            H+LDG+GK+AYALVRPPGHHAQP+QADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG
Sbjct: 136  HLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG 195

Query: 847  NGTAQGFYQSNDVLTISLHMNHGSWGPSHPQNGSVNELGEGKGYGFNLNIPLPNGTGDQG 668
            NGTA+GFY SN VLT+SLHMNHGSWGPSHPQ+GS++ELG+G+GYG+NLNIPLPNGTGD G
Sbjct: 196  NGTAEGFYSSNKVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYGYNLNIPLPNGTGDNG 255

Query: 667  YVYAMNELVVQAVDKFEPDMMVFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHS 488
            YVYA NELVV ++ KFEPDM+V V+GQDSS+FDPNGRQCLTMEGYREIGRIVH LA  HS
Sbjct: 256  YVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHS 315

Query: 487  KGRLLIVQEGGYHLTYAAYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQY 308
             GRLLIVQEGGYH+TY+AYCLHATLEG LNLP+ LL DP+AYYPED+  ++KV+++++ Y
Sbjct: 316  DGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNY 375

Query: 307  WNDNGLLFQRD 275
              D   L++ D
Sbjct: 376  VTDKMPLWKTD 386


>ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi|222849887|gb|EEE87434.1|
            histone deacetylase [Populus trichocarpa]
          Length = 379

 Score =  604 bits (1558), Expect = e-170
 Identities = 284/359 (79%), Positives = 319/359 (88%)
 Frame = -3

Query: 1384 INVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITWC 1205
            I+VFW EGML H TG GVFD+ TDPGFL VLEKHPENSDR+KNMVSIL+KGPIS YI+W 
Sbjct: 10   IDVFWHEGMLNHETGKGVFDSGTDPGFLDVLEKHPENSDRIKNMVSILQKGPISPYISWQ 69

Query: 1204 PGRVAGVSELLSFHTQEYIEELIEADKAGGKTFCAGTILNPGSWNACLIAAGTTLSAMKH 1025
             GR A V ELLSFH  EYI+EL+EA K GGK  CAGT LNPGSW+A L+AAGTTLSAMKH
Sbjct: 70   HGRPAQVPELLSFHAPEYIDELVEAGKQGGKMICAGTFLNPGSWDAALLAAGTTLSAMKH 129

Query: 1024 ILDGNGKIAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGN 845
            ILDG+GK+AYALVRPPGHHAQP QADGYCFLNNAGLAVQLALDSGCKKV VIDIDVHYGN
Sbjct: 130  ILDGHGKLAYALVRPPGHHAQPKQADGYCFLNNAGLAVQLALDSGCKKVTVIDIDVHYGN 189

Query: 844  GTAQGFYQSNDVLTISLHMNHGSWGPSHPQNGSVNELGEGKGYGFNLNIPLPNGTGDQGY 665
            GTA+GFY+++ VLT+SLHMNHGSWGPSHPQNGSV ELGEG+G+G+NLNIPLPNGTGD+GY
Sbjct: 190  GTAEGFYRTDKVLTVSLHMNHGSWGPSHPQNGSVGELGEGEGFGYNLNIPLPNGTGDRGY 249

Query: 664  VYAMNELVVQAVDKFEPDMMVFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSK 485
             YAM +LVV AV KFEPDM+VFV+GQDSS+FDPNGRQCLTM+GYREIGRIVH LA+ HS 
Sbjct: 250  GYAMKKLVVPAVHKFEPDMIVFVVGQDSSAFDPNGRQCLTMDGYREIGRIVHSLANKHSG 309

Query: 484  GRLLIVQEGGYHLTYAAYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQY 308
            G++LIVQEGGYH+TY+AYCLHA LEG L+LP  LL DPIAYYPEDEA A+K V++ + Y
Sbjct: 310  GKILIVQEGGYHITYSAYCLHAILEGVLDLPQPLLCDPIAYYPEDEAFAVKFVEATRNY 368


>ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isoform 1 [Glycine max]
          Length = 381

 Score =  601 bits (1550), Expect = e-169
 Identities = 281/363 (77%), Positives = 322/363 (88%)
 Frame = -3

Query: 1387 RINVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITW 1208
            +I+VFW EGMLKH TG GVFDT  DPGFL+VLEKHPENSDRVKN+VSILK+GPIS YI+W
Sbjct: 16   QIDVFWHEGMLKHDTGNGVFDTGMDPGFLEVLEKHPENSDRVKNLVSILKRGPISPYISW 75

Query: 1207 CPGRVAGVSELLSFHTQEYIEELIEADKAGGKTFCAGTILNPGSWNACLIAAGTTLSAMK 1028
              G  A + EL SFHT EYI EL+E DK GGK  C GT LNPGSW+A L+AAGTTLSAMK
Sbjct: 76   HLGTPAKIPELFSFHTPEYINELVEVDKEGGKQLCGGTFLNPGSWDAALLAAGTTLSAMK 135

Query: 1027 HILDGNGKIAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG 848
            H+L+G+GK++YALVRPPGHHAQP+ ADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG
Sbjct: 136  HLLNGDGKVSYALVRPPGHHAQPSLADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYG 195

Query: 847  NGTAQGFYQSNDVLTISLHMNHGSWGPSHPQNGSVNELGEGKGYGFNLNIPLPNGTGDQG 668
            NGTA+GFY+SN VLTISLHMNHGSWGPSHPQ+GSV+ELGEG+GYGFNLNIPLPNGTGD+G
Sbjct: 196  NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQSGSVDELGEGEGYGFNLNIPLPNGTGDKG 255

Query: 667  YVYAMNELVVQAVDKFEPDMMVFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHS 488
            YV+A NELVV ++ KF PDM+V V+GQDS++FDPNGRQCLTMEGYREIGRIVH LA  HS
Sbjct: 256  YVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFDPNGRQCLTMEGYREIGRIVHLLAKRHS 315

Query: 487  KGRLLIVQEGGYHLTYAAYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQY 308
             GRLLIVQEGGYH+TY+AYCLHATLEG LNLP+ LL+DPIA+Y +DE  +++V+++IK Y
Sbjct: 316  AGRLLIVQEGGYHVTYSAYCLHATLEGILNLPMPLLADPIAFYLDDETFSVQVIEAIKNY 375

Query: 307  WND 299
              D
Sbjct: 376  QKD 378


>emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]
          Length = 379

 Score =  597 bits (1540), Expect = e-168
 Identities = 281/361 (77%), Positives = 319/361 (88%)
 Frame = -3

Query: 1384 INVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITWC 1205
            INVFW EGMLKH TG GVFDT  DPGFL VLEKHPENS+R++NMVSILK+GPIS YI+W 
Sbjct: 10   INVFWHEGMLKHDTGNGVFDTGMDPGFLDVLEKHPENSERLRNMVSILKRGPISPYISWH 69

Query: 1204 PGRVAGVSELLSFHTQEYIEELIEADKAGGKTFCAGTILNPGSWNACLIAAGTTLSAMKH 1025
             G  A +S LLSFHT EYI EL++AD+ GGK  C+GT LNPGSW+A L+AAGT LSAMKH
Sbjct: 70   SGTPALISHLLSFHTPEYINELVQADRDGGKELCSGTFLNPGSWDAALLAAGTALSAMKH 129

Query: 1024 ILDGNGKIAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGN 845
            ILDG+GKIAYALVRPPGHHAQP QADGYCFLNNAGLAVQLAL+SGC KVAV DIDVHYGN
Sbjct: 130  ILDGHGKIAYALVRPPGHHAQPGQADGYCFLNNAGLAVQLALNSGCAKVAVXDIDVHYGN 189

Query: 844  GTAQGFYQSNDVLTISLHMNHGSWGPSHPQNGSVNELGEGKGYGFNLNIPLPNGTGDQGY 665
            GTA+GFY S+ VLTISLHMNHGSWGPSHPQ+GSV+E+G G+G+G+NLNIPLPNGTGD+GY
Sbjct: 190  GTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVGEGFGYNLNIPLPNGTGDRGY 249

Query: 664  VYAMNELVVQAVDKFEPDMMVFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSK 485
             YAMN+LVV A+ K+EP+MMV V+GQDSS+FDPNGRQCLTMEGYREIG+IV +LAD +S 
Sbjct: 250  AYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKYSD 309

Query: 484  GRLLIVQEGGYHLTYAAYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQYW 305
            GRLLIVQEGGY LTY+AYCLHATLEG LNLP  LLSDPIAYYPEDE +  KV+D+IK++ 
Sbjct: 310  GRLLIVQEGGYQLTYSAYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKKFQ 369

Query: 304  N 302
            N
Sbjct: 370  N 370