BLASTX nr result

ID: Coptis23_contig00020112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020112
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-lik...   267   6e-70
emb|CBI21866.3| unnamed protein product [Vitis vinifera]              267   6e-70
ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, put...   263   1e-68
emb|CAC80990.1| dihydroorotase [Beta vulgaris]                        263   1e-68
ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis ly...   262   2e-68

>ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-like [Vitis vinifera]
          Length = 377

 Score =  267 bits (683), Expect = 6e-70
 Identities = 129/147 (87%), Positives = 140/147 (95%)
 Frame = -3

Query: 445 VFAVKLYPAGATTNSQDGVTDLIGNCLPVLKEMVEQNMPLLVHGEVTDPEVDMFDREKVF 266
           VFAVKLYPAGATTNSQDGVTDL G CLPVL+EMVEQNMPLLVHGEVT+PEVD+FDREKVF
Sbjct: 125 VFAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLLVHGEVTNPEVDVFDREKVF 184

Query: 265 IETILRPLIKKLPDLKVVMEHITTQDAVRFIESCKEGSVAATVTPQHLLLNRNSLFQGGL 86
           IET+LRPLI+K P LKVVMEHITT DAVRF+ESC EGSVAATVTPQHL+LNRNSLFQGGL
Sbjct: 185 IETVLRPLIQKFPRLKVVMEHITTMDAVRFVESCNEGSVAATVTPQHLVLNRNSLFQGGL 244

Query: 85  QPHNFCLPVLKREIHRKALISAVTSGS 5
           QPHN+CLPVLKRE HR+A++SAVTSGS
Sbjct: 245 QPHNYCLPVLKRETHRQAIVSAVTSGS 271


>emb|CBI21866.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  267 bits (683), Expect = 6e-70
 Identities = 129/147 (87%), Positives = 140/147 (95%)
 Frame = -3

Query: 445 VFAVKLYPAGATTNSQDGVTDLIGNCLPVLKEMVEQNMPLLVHGEVTDPEVDMFDREKVF 266
           VFAVKLYPAGATTNSQDGVTDL G CLPVL+EMVEQNMPLLVHGEVT+PEVD+FDREKVF
Sbjct: 94  VFAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLLVHGEVTNPEVDVFDREKVF 153

Query: 265 IETILRPLIKKLPDLKVVMEHITTQDAVRFIESCKEGSVAATVTPQHLLLNRNSLFQGGL 86
           IET+LRPLI+K P LKVVMEHITT DAVRF+ESC EGSVAATVTPQHL+LNRNSLFQGGL
Sbjct: 154 IETVLRPLIQKFPRLKVVMEHITTMDAVRFVESCNEGSVAATVTPQHLVLNRNSLFQGGL 213

Query: 85  QPHNFCLPVLKREIHRKALISAVTSGS 5
           QPHN+CLPVLKRE HR+A++SAVTSGS
Sbjct: 214 QPHNYCLPVLKRETHRQAIVSAVTSGS 240


>ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus
           communis] gi|223542880|gb|EEF44416.1| Dihydroorotase,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 398

 Score =  263 bits (671), Expect = 1e-68
 Identities = 125/147 (85%), Positives = 140/147 (95%)
 Frame = -3

Query: 445 VFAVKLYPAGATTNSQDGVTDLIGNCLPVLKEMVEQNMPLLVHGEVTDPEVDMFDREKVF 266
           VFAVKLYPAGATTNSQDGVTDL G CLPVL+EMVEQNMPLLVHGEVTDP VD+FDREKVF
Sbjct: 146 VFAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLLVHGEVTDPSVDIFDREKVF 205

Query: 265 IETILRPLIKKLPDLKVVMEHITTQDAVRFIESCKEGSVAATVTPQHLLLNRNSLFQGGL 86
           I+T+L+PLI+KLP LKVVMEHITT DAVRF++SC EGSVAATVTPQHL+LNRN++FQGGL
Sbjct: 206 IDTVLQPLIQKLPRLKVVMEHITTMDAVRFVQSCDEGSVAATVTPQHLVLNRNAIFQGGL 265

Query: 85  QPHNFCLPVLKREIHRKALISAVTSGS 5
           QPHN+CLPVLKRE HR+A++SAVTSGS
Sbjct: 266 QPHNYCLPVLKRETHRQAIVSAVTSGS 292


>emb|CAC80990.1| dihydroorotase [Beta vulgaris]
          Length = 345

 Score =  263 bits (671), Expect = 1e-68
 Identities = 126/147 (85%), Positives = 141/147 (95%)
 Frame = -3

Query: 445 VFAVKLYPAGATTNSQDGVTDLIGNCLPVLKEMVEQNMPLLVHGEVTDPEVDMFDREKVF 266
           V+AVKLYPAGATTNSQDGVTDL+G CLPVL+EM EQ+MPLLVHGEVTDP+VD+FDREKVF
Sbjct: 94  VYAVKLYPAGATTNSQDGVTDLLGKCLPVLEEMAEQDMPLLVHGEVTDPDVDIFDREKVF 153

Query: 265 IETILRPLIKKLPDLKVVMEHITTQDAVRFIESCKEGSVAATVTPQHLLLNRNSLFQGGL 86
           IE++LRPLI+KLP LKVVMEHITT DAV+FIESC  G+VAATVTPQHL+LNRNSLFQGGL
Sbjct: 154 IESVLRPLIQKLPQLKVVMEHITTADAVKFIESCNGGNVAATVTPQHLVLNRNSLFQGGL 213

Query: 85  QPHNFCLPVLKREIHRKALISAVTSGS 5
           QPHN+CLPVLKREIHR+AL+SAVTSGS
Sbjct: 214 QPHNYCLPVLKREIHRQALVSAVTSGS 240


>ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis lyrata subsp. lyrata]
           gi|297315633|gb|EFH46056.1| mitochondrial dihydroorotase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  262 bits (670), Expect = 2e-68
 Identities = 123/147 (83%), Positives = 139/147 (94%)
 Frame = -3

Query: 445 VFAVKLYPAGATTNSQDGVTDLIGNCLPVLKEMVEQNMPLLVHGEVTDPEVDMFDREKVF 266
           V+AVKLYPAGATTNSQDGVTDL G CLPVL+EMV+QNMPLLVHGEVTDP +D+FDREK+F
Sbjct: 127 VYAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIF 186

Query: 265 IETILRPLIKKLPDLKVVMEHITTQDAVRFIESCKEGSVAATVTPQHLLLNRNSLFQGGL 86
           IET+L+PLI++LP LKVVMEHITT DAV F+ESCKEGSV ATVTPQHLLLNRN+LFQGGL
Sbjct: 187 IETVLQPLIQRLPQLKVVMEHITTMDAVNFVESCKEGSVGATVTPQHLLLNRNALFQGGL 246

Query: 85  QPHNFCLPVLKREIHRKALISAVTSGS 5
           QPHN+CLPVLKREIHR+A++ AVTSGS
Sbjct: 247 QPHNYCLPVLKREIHREAIVKAVTSGS 273


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