BLASTX nr result

ID: Coptis23_contig00020106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020106
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   145   4e-33
emb|CBI17373.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   145   4e-33
ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]...   139   2e-31
emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]   138   5e-31

>ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           2 [Vitis vinifera]
          Length = 596

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/105 (66%), Positives = 85/105 (80%)
 Frame = -2

Query: 316 FFSCTCTSGRGRLGYSGVATFCRINSAFNSSEVALPVAAEEGFTGLVEHRRRANSMKKDL 137
           FFSCT T+ +GR+GYSGVATFCR+ SAF+S+EVALP+AAEEGFTGL+E      + K   
Sbjct: 29  FFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKD-- 86

Query: 136 LLEVFTRVDGLEEYTDEDLLKVDSEGRCIITDHGHFVLFNIYGPR 2
             E+  + +GLEE+  ++LLKVDSEGRCIITDHGHFVLFNIYGPR
Sbjct: 87  --EIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPR 129


>emb|CBI17373.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/105 (66%), Positives = 85/105 (80%)
 Frame = -2

Query: 316 FFSCTCTSGRGRLGYSGVATFCRINSAFNSSEVALPVAAEEGFTGLVEHRRRANSMKKDL 137
           FFSCT T+ +GR+GYSGVATFCR+ SAF+S+EVALP+AAEEGFTGL+E      + K   
Sbjct: 58  FFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKD-- 115

Query: 136 LLEVFTRVDGLEEYTDEDLLKVDSEGRCIITDHGHFVLFNIYGPR 2
             E+  + +GLEE+  ++LLKVDSEGRCIITDHGHFVLFNIYGPR
Sbjct: 116 --EIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPR 158


>ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/105 (66%), Positives = 85/105 (80%)
 Frame = -2

Query: 316 FFSCTCTSGRGRLGYSGVATFCRINSAFNSSEVALPVAAEEGFTGLVEHRRRANSMKKDL 137
           FFSCT T+ +GR+GYSGVATFCR+ SAF+S+EVALP+AAEEGFTGL+E      + K   
Sbjct: 58  FFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKD-- 115

Query: 136 LLEVFTRVDGLEEYTDEDLLKVDSEGRCIITDHGHFVLFNIYGPR 2
             E+  + +GLEE+  ++LLKVDSEGRCIITDHGHFVLFNIYGPR
Sbjct: 116 --EIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPR 158


>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
           gi|223539047|gb|EEF40643.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 586

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/105 (65%), Positives = 80/105 (76%)
 Frame = -2

Query: 316 FFSCTCTSGRGRLGYSGVATFCRINSAFNSSEVALPVAAEEGFTGLVEHRRRANSMKKDL 137
           FFSCT T+ +GR GYSGVATFCR+ SAF+SSEVALPV AEEGFTGLV+  R         
Sbjct: 29  FFSCTRTNEKGRTGYSGVATFCRVKSAFSSSEVALPVGAEEGFTGLVDCSRNGKH----- 83

Query: 136 LLEVFTRVDGLEEYTDEDLLKVDSEGRCIITDHGHFVLFNIYGPR 2
             E+     GLEE+  ++LLK+DSEGRCIITDHGHFVLFN+YGPR
Sbjct: 84  --EMPVVAQGLEEFDKDELLKIDSEGRCIITDHGHFVLFNLYGPR 126


>emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]
          Length = 632

 Score =  138 bits (347), Expect = 5e-31
 Identities = 70/112 (62%), Positives = 85/112 (75%), Gaps = 7/112 (6%)
 Frame = -2

Query: 316 FFSCTCTSGRGRLGYSGVATFCRINSAFNSSEVALPVAAEEGFTGLVEHRRRANSMKKDL 137
           FFSCT T+ +GR+GYSGVATFCR+ SAF+S+EVALP+AAEEGFTGL+E      + K   
Sbjct: 58  FFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKD-- 115

Query: 136 LLEVFTRVDGLEEYTDEDLLKVDSEGRCIITDHGHF-------VLFNIYGPR 2
             E+  + +GLEE+  ++LLKVDSEGRCIITDHGHF       VLFNIYGPR
Sbjct: 116 --EIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFADYGNWPVLFNIYGPR 165


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