BLASTX nr result

ID: Coptis23_contig00020101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020101
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31179.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002270929.1| PREDICTED: uncharacterized protein LOC100255...    88   6e-16
emb|CAN80630.1| hypothetical protein VITISV_026657 [Vitis vinifera]    88   6e-16
ref|XP_002530963.1| hypothetical protein RCOM_0845740 [Ricinus c...    83   2e-14
gb|ABK94064.1| unknown [Populus trichocarpa]                           71   1e-10

>emb|CBI31179.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 56/143 (39%), Positives = 79/143 (55%), Gaps = 15/143 (10%)
 Frame = -1

Query: 417 EAALEQVLKTLWNTRKTGLIKPQDKSCIXXXXXXXXXXXXXXLVACLRLVVRKCVHQTTT 238
           E A+E++L+TLW TRKTGL   Q KS +              ++ACLR ++RK VH+  +
Sbjct: 73  EEAIEEILETLWKTRKTGL-STQQKSHLQSLLSLPSLQQVDPVLACLRSLIRKSVHENFS 131

Query: 237 DDDFFK--PP----HLQNLLL----KYQTAWKEEASKDQFPCQRSNIS-TVQNCLPPPST 91
            DD  K  PP     LQ+LL+    KYQ  WKE+ S+D++P   +++S  V+  +P   T
Sbjct: 132 GDDILKLFPPDLSLDLQSLLILLFQKYQNQWKEDLSRDEYPLPGAHVSYQVKTNVPLSFT 191

Query: 90  PLPD----IVMWPRQHHSSTHNN 34
           PLP       +WPRQ  S  H N
Sbjct: 192 PLPSSETPASLWPRQDDSIAHFN 214


>ref|XP_002270929.1| PREDICTED: uncharacterized protein LOC100255422 [Vitis vinifera]
          Length = 277

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 56/143 (39%), Positives = 79/143 (55%), Gaps = 15/143 (10%)
 Frame = -1

Query: 417 EAALEQVLKTLWNTRKTGLIKPQDKSCIXXXXXXXXXXXXXXLVACLRLVVRKCVHQTTT 238
           E A+E++L+TLW TRKTGL   Q KS +              ++ACLR ++RK VH+  +
Sbjct: 18  EEAIEEILETLWKTRKTGL-STQQKSHLQSLLSLPSLQQVDPVLACLRSLIRKSVHENFS 76

Query: 237 DDDFFK--PP----HLQNLLL----KYQTAWKEEASKDQFPCQRSNIS-TVQNCLPPPST 91
            DD  K  PP     LQ+LL+    KYQ  WKE+ S+D++P   +++S  V+  +P   T
Sbjct: 77  GDDILKLFPPDLSLDLQSLLILLFQKYQNQWKEDLSRDEYPLPGAHVSYQVKTNVPLSFT 136

Query: 90  PLPD----IVMWPRQHHSSTHNN 34
           PLP       +WPRQ  S  H N
Sbjct: 137 PLPSSETPASLWPRQDDSIAHFN 159


>emb|CAN80630.1| hypothetical protein VITISV_026657 [Vitis vinifera]
          Length = 242

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 56/143 (39%), Positives = 79/143 (55%), Gaps = 15/143 (10%)
 Frame = -1

Query: 417 EAALEQVLKTLWNTRKTGLIKPQDKSCIXXXXXXXXXXXXXXLVACLRLVVRKCVHQTTT 238
           E A+E++L+TLW TRKTGL   Q KS +              ++ACLR ++RK VH+  +
Sbjct: 18  EEAIEEILETLWKTRKTGL-STQQKSHLQSLLSLPSLQQVDPVLACLRSLIRKSVHENFS 76

Query: 237 DDDFFK--PP----HLQNLLL----KYQTAWKEEASKDQFPCQRSNIS-TVQNCLPPPST 91
            DD  K  PP     LQ+LL+    KYQ  WKE+ S+D++P   +++S  V+  +P   T
Sbjct: 77  GDDILKLFPPDLSLDLQSLLILLFQKYQNQWKEDLSRDEYPLPGAHVSYQVKTNVPLSFT 136

Query: 90  PLPD----IVMWPRQHHSSTHNN 34
           PLP       +WPRQ  S  H N
Sbjct: 137 PLPSSETPASLWPRQDDSIAHFN 159


>ref|XP_002530963.1| hypothetical protein RCOM_0845740 [Ricinus communis]
           gi|223529478|gb|EEF31435.1| hypothetical protein
           RCOM_0845740 [Ricinus communis]
          Length = 304

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 16/137 (11%)
 Frame = -1

Query: 417 EAALEQVLKTLWNTRKTGLIKPQDKSCIXXXXXXXXXXXXXXLVACLRLVVRKCVHQTTT 238
           E +L+ +L TLW TR+TGL  P+ KS I              ++ACLR ++RK  H+  T
Sbjct: 19  EESLDHILATLWKTRRTGLRSPE-KSQIQSLLNLSSLPELDPVLACLRSLIRKSAHENFT 77

Query: 237 DDDFFK--PPHLQ-----NLLL---KYQTAWKEEASKDQFPCQRSNIS-TVQNCLPPPST 91
            DD  K  PP L      NL+L   KYQ  WKEE S++Q    R+++S  V+  +PP  T
Sbjct: 78  GDDLLKLFPPDLSLDLQSNLILLLQKYQNQWKEEISREQHQLPRTSVSYQVKTSMPPSLT 137

Query: 90  PLP-----DIVMWPRQH 55
            LP     ++ +WPRQ+
Sbjct: 138 ALPSLEISNMPLWPRQN 154


>gb|ABK94064.1| unknown [Populus trichocarpa]
          Length = 274

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
 Frame = -1

Query: 417 EAALEQVLKTLWNTRKTGLIKPQDKSCIXXXXXXXXXXXXXXLVACLRLVVRKCVHQTTT 238
           E  +E +L +LW TR+TGL  P  KS                ++ACLR ++RKCVH+  +
Sbjct: 24  EEDVEHILTSLWKTRRTGLPSPL-KSRFQSLLDIPSLPQLDPVLACLRSIIRKCVHENMS 82

Query: 237 DDDFFK--PPHLQ--------NLLLKYQTAWKEE--ASKDQFPCQRSNISTVQNCLPPPS 94
            D+  K  PP L          LLLKYQ  WK++  A+ +Q    R+++  +    PP  
Sbjct: 83  SDELLKLFPPDLSLDLQTTLITLLLKYQIQWKQDDLATTEQHSLPRTSVFGISG--PPSF 140

Query: 93  TPLPDIVMWPRQHHSSTHNNEPLFQ 19
           T      +WPRQ  ++   N   F+
Sbjct: 141 TAEVPTQLWPRQDDTNGRFNHNGFE 165


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